BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0201.p         (61 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T145.1 A6T145_JANMA 50S ribosomal protein L28                        77   8e-13
D8J1S9.1 D8J1S9_HERSS 50S ribosomal protein L28                        77   8e-13
B0LFR3.1 B0LFR3_9BACT 50S ribosomal protein L28                        77   9e-13
A4G7W0.1 RL28_HERAR 50S ribosomal protein L28                          77   9e-13
B3R6F8.1 RL28_CUPTR 50S ribosomal protein L28                          75   4e-12

>A6T145.1 A6T145_JANMA 50S ribosomal protein L28
          Length = 112

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 47 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 82


>D8J1S9.1 D8J1S9_HERSS 50S ribosomal protein L28
          Length = 78

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>B0LFR3.1 B0LFR3_9BACT 50S ribosomal protein L28
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>A4G7W0.1 RL28_HERAR 50S ribosomal protein L28
          Length = 78

 Score = 77.0 bits (188), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/36 (100%), Positives = 36/36 (100%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 48


>B3R6F8.1 RL28_CUPTR 50S ribosomal protein L28
          Length = 77

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/36 (97%), Positives = 35/36 (97%)

Query: 1  MVGNNVSHANNKTKRRFLPNLQNRRIFVESENRWVS 36
          MVGNNVSHANNKTKRRFLPNLQNRR FVESENRWVS
Sbjct: 13 MVGNNVSHANNKTKRRFLPNLQNRRFFVESENRWVS 48