BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0197.p (309 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUY4.1 D8IUY4_HERSS ABC-type branched-chain amino acid transpo... 546 e-153 A4G7V6.1 A4G7V6_HERAR Putative high-affinity branched-chain amin... 526 e-147 A6T141.1 A6T141_JANMA Branched-chain amino acid ABC-type transpo... 518 e-145 F1W294.1 F1W294_9BURK High-affinity branched-chain amino acid tr... 497 e-139 B0LFS0.1 B0LFS0_9BACT ABC transporter 464 e-128 >D8IUY4.1 D8IUY4_HERSS ABC-type branched-chain amino acid transport system, permease component protein Length = 309 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 283/309 (91%), Positives = 302/309 (97%) Query: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGLSILKLIQHV 60 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGD+LM+GAM GLS+LK++Q V Sbjct: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDILMVGAMVGLSLLKVVQQV 60 Query: 61 APDLPGIVKLIIAIIGAIPVCVIVSMIIERVAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 AP LPGIV+L+IAI+GAIPVC++VS++IER+AYRPLRNAPRLAPLITAIGVSILLQTLAM Sbjct: 61 APGLPGIVQLVIAIVGAIPVCIVVSLLIERIAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 Query: 121 MIWGRSPLPFPQIMPSDPVHIAGALISPTQIMLLLLALAAMIGLVLIVEKTKMGRAMRAT 180 MIWGRSPLPFPQ+MPSDPVHIAGALISPTQIMLL LA+ AM+GLVLIVEKTKMGRAMRAT Sbjct: 121 MIWGRSPLPFPQVMPSDPVHIAGALISPTQIMLLALAVLAMVGLVLIVEKTKMGRAMRAT 180 Query: 181 AENPRIAGLMGVDSNRVIVVTFIIGAALAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 AENPRIAGLMGVD+N+VIVVTF IGA LAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV Sbjct: 181 AENPRIAGLMGVDANKVIVVTFAIGAGLAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 Query: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGDFLGSNYQDIFAFIVLIIVLTLRPSGI 300 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTG+FLGSNYQDIFAFIVLIIVLTLRPSGI Sbjct: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGNFLGSNYQDIFAFIVLIIVLTLRPSGI 300 Query: 301 MGERVADRA 309 MGERVADRA Sbjct: 301 MGERVADRA 309 >A4G7V6.1 A4G7V6_HERAR Putative high-affinity branched-chain amino acid transport system permease protein BraD/LivH-like Length = 309 Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust. Identities = 273/309 (88%), Positives = 297/309 (96%) Query: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGLSILKLIQHV 60 MDIFIQQIINGLVLGSMYAL+ALGYTMVYGVLNLINFAHGDVLMIGAMAGL+ILK++ V Sbjct: 1 MDIFIQQIINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTV 60 Query: 61 APDLPGIVKLIIAIIGAIPVCVIVSMIIERVAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 APDLPGIVKLIIAI+GAIPVCV V+++IERVAYR LRNAPRLAPLITAIGVSILLQT AM Sbjct: 61 APDLPGIVKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTFAM 120 Query: 121 MIWGRSPLPFPQIMPSDPVHIAGALISPTQIMLLLLALAAMIGLVLIVEKTKMGRAMRAT 180 MIWGRSPLPFPQ+MP +P+HI GALISPTQ+MLL+LA A+M+ L L++EKTK+GRAMRAT Sbjct: 121 MIWGRSPLPFPQVMPGEPLHILGALISPTQVMLLILAAASMLLLALLIEKTKLGRAMRAT 180 Query: 181 AENPRIAGLMGVDSNRVIVVTFIIGAALAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 AENPR+AGLMGVDSNRVIV+TF+IGA LAAIAGVMWAANYS+AQFAMGFVPGLKAFSAAV Sbjct: 181 AENPRVAGLMGVDSNRVIVMTFVIGATLAAIAGVMWAANYSSAQFAMGFVPGLKAFSAAV 240 Query: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGDFLGSNYQDIFAFIVLIIVLTLRPSGI 300 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTG FLGS+YQDIFAF+VLIIVLTLRPSGI Sbjct: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGGFLGSHYQDIFAFVVLIIVLTLRPSGI 300 Query: 301 MGERVADRA 309 MGERVADRA Sbjct: 301 MGERVADRA 309 >A6T141.1 A6T141_JANMA Branched-chain amino acid ABC-type transport system, permease components Length = 309 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/309 (88%), Positives = 295/309 (95%) Query: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGLSILKLIQHV 60 MDIFIQQIINGLVLGSMYAL+ALGYTMVYGVLNLINFAHGDVLMIGAMAGL+ILK++ V Sbjct: 1 MDIFIQQIINGLVLGSMYALVALGYTMVYGVLNLINFAHGDVLMIGAMAGLTILKMLNTV 60 Query: 61 APDLPGIVKLIIAIIGAIPVCVIVSMIIERVAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 APDLPGIVKLIIAI+GAIPVCV V+++IERVAYR LRNAPRLAPLITAIGVSILLQTLAM Sbjct: 61 APDLPGIVKLIIAILGAIPVCVAVNVLIERVAYRRLRNAPRLAPLITAIGVSILLQTLAM 120 Query: 121 MIWGRSPLPFPQIMPSDPVHIAGALISPTQIMLLLLALAAMIGLVLIVEKTKMGRAMRAT 180 MIWGRSP+PFPQ MP++P+HI GALISPTQ+MLL+LA AM LVL++EKT+MGRAMRAT Sbjct: 121 MIWGRSPIPFPQEMPTEPLHIMGALISPTQVMLLILAAVAMGLLVLLIEKTRMGRAMRAT 180 Query: 181 AENPRIAGLMGVDSNRVIVVTFIIGAALAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 +ENPR+AGLMGVDSNRVIV+TF IGA LAAIAGVMWAANYS+AQFAMGFVPGLKAFSAAV Sbjct: 181 SENPRVAGLMGVDSNRVIVMTFAIGAILAAIAGVMWAANYSSAQFAMGFVPGLKAFSAAV 240 Query: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGDFLGSNYQDIFAFIVLIIVLTLRPSGI 300 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTG FLGS+YQDIFAF+VLIIVLTLRPSGI Sbjct: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGGFLGSHYQDIFAFVVLIIVLTLRPSGI 300 Query: 301 MGERVADRA 309 MGERV DRA Sbjct: 301 MGERVPDRA 309 >F1W294.1 F1W294_9BURK High-affinity branched-chain amino acid transport system permease protein LivH Length = 309 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 262/309 (84%), Positives = 289/309 (93%) Query: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGLSILKLIQHV 60 MD FIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAG++ILK++Q V Sbjct: 1 MDTFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGVTILKIVQTV 60 Query: 61 APDLPGIVKLIIAIIGAIPVCVIVSMIIERVAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 APDLPG+VK++IAI GAIP+CV V+++IERVAY LRNAPRLAPLITAIGVSILLQT AM Sbjct: 61 APDLPGVVKILIAIGGAIPICVAVNLLIERVAYPRLRNAPRLAPLITAIGVSILLQTFAM 120 Query: 121 MIWGRSPLPFPQIMPSDPVHIAGALISPTQIMLLLLALAAMIGLVLIVEKTKMGRAMRAT 180 MIWGRSP+ FPQ++ ++ HI GALISPTQ+MLL+LA +M GLVL+VEKTKMGRAMRAT Sbjct: 121 MIWGRSPVAFPQVISAESYHILGALISPTQVMLLVLAGISMFGLVLLVEKTKMGRAMRAT 180 Query: 181 AENPRIAGLMGVDSNRVIVVTFIIGAALAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 AENPR+AGLMGVDSN VIV+TF IGAALAA+AGVMW A Y++AQFAMGFVPGLKAFSAAV Sbjct: 181 AENPRVAGLMGVDSNAVIVMTFAIGAALAAVAGVMWGATYASAQFAMGFVPGLKAFSAAV 240 Query: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGDFLGSNYQDIFAFIVLIIVLTLRPSGI 300 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTG FLGS+YQDIFAF+VLIIVLTLRPSGI Sbjct: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGGFLGSHYQDIFAFVVLIIVLTLRPSGI 300 Query: 301 MGERVADRA 309 MGERVADRA Sbjct: 301 MGERVADRA 309 >B0LFS0.1 B0LFS0_9BACT ABC transporter Length = 309 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 250/309 (80%), Positives = 281/309 (90%) Query: 1 MDIFIQQIINGLVLGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMAGLSILKLIQHV 60 MD FIQQIINGLV+GSMYALIALGYTMVYGVLNLINFAHGDVLMIGAM GLSILK +Q V Sbjct: 1 MDTFIQQIINGLVIGSMYALIALGYTMVYGVLNLINFAHGDVLMIGAMVGLSILKFLQVV 60 Query: 61 APDLPGIVKLIIAIIGAIPVCVIVSMIIERVAYRPLRNAPRLAPLITAIGVSILLQTLAM 120 +P++ G + L +AI+GAIPVC+IV++IIERVAYR LRNAPRLAPLITAIGVS LL T AM Sbjct: 61 SPEMHGGLMLALAILGAIPVCMIVNVIIERVAYRRLRNAPRLAPLITAIGVSYLLVTFAM 120 Query: 121 MIWGRSPLPFPQIMPSDPVHIAGALISPTQIMLLLLALAAMIGLVLIVEKTKMGRAMRAT 180 WGR+PL FPQ++ S+P+ I GA+IS TQ++LL LAL +M GLVL+VEKTKMGRAMRAT Sbjct: 121 WYWGRAPLSFPQLLSSEPISIGGAVISQTQVLLLALALLSMGGLVLLVEKTKMGRAMRAT 180 Query: 181 AENPRIAGLMGVDSNRVIVVTFIIGAALAAIAGVMWAANYSTAQFAMGFVPGLKAFSAAV 240 AENPR+AGLMGVDSN+VIV TF IGAALAA+AGVMW ANYS+ QFAMGF+PGLKAF AAV Sbjct: 181 AENPRVAGLMGVDSNKVIVATFAIGAALAAVAGVMWGANYSSIQFAMGFLPGLKAFCAAV 240 Query: 241 LGGIGNIYGAMLGGILLGLIESLGAGYIGDLTGDFLGSNYQDIFAFIVLIIVLTLRPSGI 300 LGGIGNIYGAM+GGILLGLIE+LGAGYIGDLTG FLGS+YQDIFAF+VLIIVLT+RPSGI Sbjct: 241 LGGIGNIYGAMIGGILLGLIEALGAGYIGDLTGGFLGSHYQDIFAFVVLIIVLTVRPSGI 300 Query: 301 MGERVADRA 309 MGERVADRA Sbjct: 301 MGERVADRA 309