BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0192.p         (60 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUY7.1 D8IUY7_HERSS ABC-type branched-chain amino acid transpo...   111   3e-23
Q0K7C0.1 Q0K7C0_CUPNH ABC-type transporter, ATPase component: HA...   106   1e-21
B0LFS3.1 B0LFS3_9BACT ABC transporter                                 105   2e-21
Q1LJE0.1 Q1LJE0_RALME Leucine/isoleucine/valine transporter subu...   105   3e-21
C6BCA5.1 C6BCA5_RALP1 ABC transporter related                         104   4e-21

>D8IUY7.1 D8IUY7_HERSS ABC-type branched-chain amino acid transport system,
           ATPase component protein
          Length = 241

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 54/59 (91%), Positives = 56/59 (94%)

Query: 1   VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMSGNAKDMLNDPRVKAAYLGE 59
           VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITM G A+ ML+DPRVKAAYLGE
Sbjct: 182 VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMQGQAQQMLDDPRVKAAYLGE 240


>Q0K7C0.1 Q0K7C0_CUPNH ABC-type transporter, ATPase component: HAAT family
           EC=3.6.3.22
          Length = 238

 Score =  106 bits (264), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 58/59 (98%)

Query: 1   VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMSGNAKDMLNDPRVKAAYLGE 59
           V+R++SAQG+T+LLVEQNA+LAL+AAHRGYVMESGLITMSG+AK ML+DP+V+AAYLGE
Sbjct: 180 VVRDISAQGVTVLLVEQNARLALQAAHRGYVMESGLITMSGDAKQMLDDPKVRAAYLGE 238


>B0LFS3.1 B0LFS3_9BACT ABC transporter
          Length = 240

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 55/59 (93%)

Query: 1   VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMSGNAKDMLNDPRVKAAYLGE 59
           VIR+VS QGITILLVEQNAKLAL+AAHRGYVM+SG + MSGNA DML+DPRVKAAYLGE
Sbjct: 182 VIRDVSKQGITILLVEQNAKLALQAAHRGYVMDSGAVIMSGNADDMLHDPRVKAAYLGE 240


>Q1LJE0.1 Q1LJE0_RALME Leucine/isoleucine/valine transporter subunit,
           ATP-binding component of ABC superfamily
          Length = 238

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 57/59 (96%)

Query: 1   VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMSGNAKDMLNDPRVKAAYLGE 59
           V+R VS+QG+T+LLVEQNA+LAL+AAHRGYVMESGLITMSG+AK ML+DP+V+AAYLGE
Sbjct: 180 VVRTVSSQGVTVLLVEQNARLALQAAHRGYVMESGLITMSGDAKQMLDDPKVRAAYLGE 238


>C6BCA5.1 C6BCA5_RALP1 ABC transporter related
          Length = 238

 Score =  104 bits (260), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 58/59 (98%)

Query: 1   VIRNVSAQGITILLVEQNAKLALEAAHRGYVMESGLITMSGNAKDMLNDPRVKAAYLGE 59
           V+R++SAQG+T+LLVEQNA+LAL+AAHRGYVM+SGLITMSG+AK ML+DP+V+AAYLGE
Sbjct: 180 VVRDISAQGVTVLLVEQNARLALQAAHRGYVMDSGLITMSGDAKQMLDDPKVRAAYLGE 238