BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0182.p         (122 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IUZ0.1 D8IUZ0_HERSS ATP-dependent protease ATPase subunit HslU      204   4e-51
A4G990.1 A4G990_HERAR ATP-dependent protease ATPase subunit HslU      199   1e-49
Q47JL8.1 HSLU_DECAR ATP-dependent protease ATPase subunit HslU        191   2e-47
A6T307.1 A6T307_JANMA ATP-dependent protease ATPase subunit HslU      188   2e-46
C7RLE7.1 C7RLE7_ACCPU ATP-dependent protease ATPase subunit HslU      186   1e-45

>D8IUZ0.1 D8IUZ0_HERSS ATP-dependent protease ATPase subunit HslU
          Length = 448

 Score =  204 bits (518), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 101/122 (82%), Positives = 111/122 (90%)

Query: 1   LQGRFPIRVELDSLSIDDFKTILTGTDACLTKQYQALLETEGVKVEFDDSGIQQLAEIAF 60
           LQGRFPIRVELDSLSI DF+ ILTGTDACLTKQY+ALL TEGVK+EF DSGI++LAEI+ 
Sbjct: 327 LQGRFPIRVELDSLSIADFERILTGTDACLTKQYEALLATEGVKLEFADSGIKRLAEISH 386

Query: 61  SVNEKTENIGARRLYTVMEKLLEEISFTAGETGAQTIAIDAAYVKDRLGELAVNEDLSRY 120
           SVNEKTENIGARRLYTVMEKLLEEISFTAGE G + + IDA YV +RLGELAV+EDLSRY
Sbjct: 387 SVNEKTENIGARRLYTVMEKLLEEISFTAGEAGVEGLLIDADYVNERLGELAVDEDLSRY 446

Query: 121 VL 122
           VL
Sbjct: 447 VL 448


>A4G990.1 A4G990_HERAR ATP-dependent protease ATPase subunit HslU
          Length = 445

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/122 (79%), Positives = 109/122 (89%)

Query: 1   LQGRFPIRVELDSLSIDDFKTILTGTDACLTKQYQALLETEGVKVEFDDSGIQQLAEIAF 60
           LQGRFPIRVEL+SLSI DF+ ILTGTDACLTKQYQALL TEGVK+EF   GI+++AEIA+
Sbjct: 324 LQGRFPIRVELESLSIADFERILTGTDACLTKQYQALLATEGVKIEFAQDGIKRMAEIAY 383

Query: 61  SVNEKTENIGARRLYTVMEKLLEEISFTAGETGAQTIAIDAAYVKDRLGELAVNEDLSRY 120
           SVNEKTENIGARRLYTVMEKLLEEISF+A E   QT+ IDAAYV +RLG L+V+EDLSRY
Sbjct: 384 SVNEKTENIGARRLYTVMEKLLEEISFSASENPDQTLPIDAAYVNERLGALSVDEDLSRY 443

Query: 121 VL 122
           VL
Sbjct: 444 VL 445


>Q47JL8.1 HSLU_DECAR ATP-dependent protease ATPase subunit HslU
          Length = 446

 Score =  191 bits (486), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/122 (76%), Positives = 107/122 (87%)

Query: 1   LQGRFPIRVELDSLSIDDFKTILTGTDACLTKQYQALLETEGVKVEFDDSGIQQLAEIAF 60
           LQGRFPIRVELDSLS+ DF+ ILT TDACLT+QYQALLETEGV++EF + GI++LAEIAF
Sbjct: 325 LQGRFPIRVELDSLSVADFECILTQTDACLTRQYQALLETEGVQLEFVEDGIRRLAEIAF 384

Query: 61  SVNEKTENIGARRLYTVMEKLLEEISFTAGETGAQTIAIDAAYVKDRLGELAVNEDLSRY 120
            VNEKTENIGARRL+TVMEKLLEE+SF AG+ G   + IDAAYV  +LGELA +EDLSRY
Sbjct: 385 QVNEKTENIGARRLHTVMEKLLEEVSFDAGKVGLDKVLIDAAYVNTKLGELAADEDLSRY 444

Query: 121 VL 122
           VL
Sbjct: 445 VL 446


>A6T307.1 A6T307_JANMA ATP-dependent protease ATPase subunit HslU
          Length = 449

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/122 (75%), Positives = 106/122 (86%)

Query: 1   LQGRFPIRVELDSLSIDDFKTILTGTDACLTKQYQALLETEGVKVEFDDSGIQQLAEIAF 60
           LQGRFPIRVEL+SLSI DF+ ILT TDACLT+QY+ALL TEGVK+EF   GI+++AEIA+
Sbjct: 328 LQGRFPIRVELESLSIADFERILTSTDACLTRQYEALLGTEGVKIEFAPDGIKRMAEIAY 387

Query: 61  SVNEKTENIGARRLYTVMEKLLEEISFTAGETGAQTIAIDAAYVKDRLGELAVNEDLSRY 120
           SVNEKTENIGARRLYTVMEKLLEEISF+A +   QT+ ID  YV +RLG L+VNEDLSRY
Sbjct: 388 SVNEKTENIGARRLYTVMEKLLEEISFSATDDPDQTLVIDGVYVDERLGALSVNEDLSRY 447

Query: 121 VL 122
           VL
Sbjct: 448 VL 449


>C7RLE7.1 C7RLE7_ACCPU ATP-dependent protease ATPase subunit HslU
          Length = 443

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 90/122 (73%), Positives = 105/122 (86%)

Query: 1   LQGRFPIRVELDSLSIDDFKTILTGTDACLTKQYQALLETEGVKVEFDDSGIQQLAEIAF 60
           LQGRFPIRVELDSLS+ DF+ ILT TDACLTKQYQALL TEGV ++F   G+++LAEIA+
Sbjct: 322 LQGRFPIRVELDSLSVADFECILTQTDACLTKQYQALLATEGVTLDFAAEGVKRLAEIAW 381

Query: 61  SVNEKTENIGARRLYTVMEKLLEEISFTAGETGAQTIAIDAAYVKDRLGELAVNEDLSRY 120
           SVNE+TENIGARRLYTVME+LLEE+SF+AG+  +  +AIDA YV  RL ELA NEDLSRY
Sbjct: 382 SVNERTENIGARRLYTVMERLLEEVSFSAGKEASDLVAIDATYVDSRLAELAENEDLSRY 441

Query: 121 VL 122
           VL
Sbjct: 442 VL 443