BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0171.p (296 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0T1.1 D8J0T1_HERSS ABC-type sugar transport system, permease ... 533 e-150 D8NM87.1 D8NM87_RALSO Putative ABC transporter permease 503 e-140 D8NWL0.1 D8NWL0_RALSO Putative ABC transporter permease 502 e-140 B5SJM2.1 B5SJM2_RALSO Sugar abc transporter, permease protein 501 e-140 B5RX05.1 B5RX05_RALSO Sugar abc transporter, permease protein 501 e-140 >D8J0T1.1 D8J0T1_HERSS ABC-type sugar transport system, permease component protein Length = 296 Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust. Identities = 273/296 (92%), Positives = 283/296 (95%) Query: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQSVFVGLEWFRAVMRDS 60 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQ VFVGL+WFR VMRD Sbjct: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQKVFVGLDWFREVMRDG 60 Query: 61 ELHSALLRQLIFSFCVLLVQIPLGIGLALSMPAQGWKSSAALVILAMPLLIPWNVVGTIW 120 ELH+ALLRQLIFSFCVLLVQIPLGIGLAL+MP +GWKSSA LVILAMPLLIPWNVVGTIW Sbjct: 61 ELHAALLRQLIFSFCVLLVQIPLGIGLALAMPHKGWKSSATLVILAMPLLIPWNVVGTIW 120 Query: 121 QIFGRADIGLGGYVLSRLGMDYNYASNSLDAWITVLVMDVWHWTPLVALLAFAGLRSIPD 180 QIFGRADIGLGGYVL+ LG+DYNYASN LDAW+TVL+MDVWHWTPLVALLAFAGLRSIPD Sbjct: 121 QIFGRADIGLGGYVLNLLGIDYNYASNPLDAWLTVLLMDVWHWTPLVALLAFAGLRSIPD 180 Query: 181 AYYQAAQIDGASRWAVFRFIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 AYYQAAQIDGASRWAVFR+IQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT Sbjct: 181 AYYQAAQIDGASRWAVFRYIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 Query: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNGGQNTGANHE 296 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGN +G HE Sbjct: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNHANASGGQHE 296 >D8NM87.1 D8NM87_RALSO Putative ABC transporter permease Length = 296 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 241/295 (81%), Positives = 269/295 (91%) Query: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQSVFVGLEWFRAVMRDS 60 MNKP NNKAWF ILPVFL VAFSAI+PLMTVVNYSVQDIISPEQ VFVG++WFR ++RDS Sbjct: 1 MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDS 60 Query: 61 ELHSALLRQLIFSFCVLLVQIPLGIGLALSMPAQGWKSSAALVILAMPLLIPWNVVGTIW 120 +L AL RQLIFS CVL V+IPLGIGLAL+MP++GWK+SAALV+LAMPLLIPWNVVGTIW Sbjct: 61 DLQDALTRQLIFSLCVLAVEIPLGIGLALAMPSKGWKASAALVVLAMPLLIPWNVVGTIW 120 Query: 121 QIFGRADIGLGGYVLSRLGMDYNYASNSLDAWITVLVMDVWHWTPLVALLAFAGLRSIPD 180 QIFGR+DIGL GY L+R+G+DYNY S+S DAWITVL+MDVWHWTPLVALLA+AGLRSIPD Sbjct: 121 QIFGRSDIGLAGYWLNRMGVDYNYTSHSFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD 180 Query: 181 AYYQAAQIDGASRWAVFRFIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 A+YQAA+IDGASR AVFR+IQLPKMRGVL+I VLLRFMDSFMIYTEPFVLTGGGPGN+TT Sbjct: 181 AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT 240 Query: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNGGQNTGANH 295 FLSQYLTQKAVGQFDLGPAAAFS++YFLIILL FVLYNWMQ G+ G +H Sbjct: 241 FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRLGSASAAVGDDH 295 >D8NWL0.1 D8NWL0_RALSO Putative ABC transporter permease Length = 296 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 241/295 (81%), Positives = 268/295 (90%) Query: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQSVFVGLEWFRAVMRDS 60 MNKP NNKAWF ILPVFL VAFSAI+PLMTVVNYSVQDIISPEQ VFVG++WFR ++RD Sbjct: 1 MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDG 60 Query: 61 ELHSALLRQLIFSFCVLLVQIPLGIGLALSMPAQGWKSSAALVILAMPLLIPWNVVGTIW 120 +L AL RQLIFS CVL V+IPLGIGLAL+MP++GWK+SAALVILAMPLLIPWNVVGTIW Sbjct: 61 DLQDALTRQLIFSLCVLAVEIPLGIGLALAMPSKGWKASAALVILAMPLLIPWNVVGTIW 120 Query: 121 QIFGRADIGLGGYVLSRLGMDYNYASNSLDAWITVLVMDVWHWTPLVALLAFAGLRSIPD 180 QIFGR+DIGL GY L+R+G+DYNY S+S DAWITVL+MDVWHWTPLVALLA+AGLRSIPD Sbjct: 121 QIFGRSDIGLAGYWLNRMGIDYNYTSHSFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD 180 Query: 181 AYYQAAQIDGASRWAVFRFIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 A+YQAA+IDGASR AVFR+IQLPKMRGVL+I VLLRFMDSFMIYTEPFVLTGGGPGN+TT Sbjct: 181 AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT 240 Query: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNGGQNTGANH 295 FLSQYLTQKAVGQFDLGPAAAFS++YFLIILL FVLYNWMQ G+ G +H Sbjct: 241 FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASAAMGDDH 295 >B5SJM2.1 B5SJM2_RALSO Sugar abc transporter, permease protein Length = 296 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 240/295 (81%), Positives = 268/295 (90%) Query: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQSVFVGLEWFRAVMRDS 60 MNKP NNKAWF ILPVFL VAFSAI+PLMTVVNYSVQDIISPEQ VFVG++WFR ++RD Sbjct: 1 MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDG 60 Query: 61 ELHSALLRQLIFSFCVLLVQIPLGIGLALSMPAQGWKSSAALVILAMPLLIPWNVVGTIW 120 +L AL RQLIFS CVL V+IPLGIGLAL+MP++GWK+SAALV+LAMPLLIPWNVVGTIW Sbjct: 61 DLQDALTRQLIFSLCVLAVEIPLGIGLALAMPSKGWKASAALVVLAMPLLIPWNVVGTIW 120 Query: 121 QIFGRADIGLGGYVLSRLGMDYNYASNSLDAWITVLVMDVWHWTPLVALLAFAGLRSIPD 180 QIFGR+DIGL GY L+R+G+DYNY S+S DAWITVL+MDVWHWTPLVALLA+AGLRSIPD Sbjct: 121 QIFGRSDIGLAGYWLNRMGVDYNYTSHSFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD 180 Query: 181 AYYQAAQIDGASRWAVFRFIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 A+YQAA+IDGASR AVFR+IQLPKMRGVL+I VLLRFMDSFMIYTEPFVLTGGGPGN+TT Sbjct: 181 AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT 240 Query: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNGGQNTGANH 295 FLSQYLTQKAVGQFDLGPAAAFS++YFLIILL FVLYNWMQ G+ G +H Sbjct: 241 FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASAAVGDDH 295 >B5RX05.1 B5RX05_RALSO Sugar abc transporter, permease protein Length = 296 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 240/295 (81%), Positives = 268/295 (90%) Query: 1 MNKPYNNKAWFFILPVFLTVAFSAIIPLMTVVNYSVQDIISPEQSVFVGLEWFRAVMRDS 60 MNKP NNKAWF ILPVFL VAFSAI+PLMTVVNYSVQDIISPEQ VFVG++WFR ++RD Sbjct: 1 MNKPLNNKAWFLILPVFLCVAFSAILPLMTVVNYSVQDIISPEQHVFVGVDWFRQILRDG 60 Query: 61 ELHSALLRQLIFSFCVLLVQIPLGIGLALSMPAQGWKSSAALVILAMPLLIPWNVVGTIW 120 +L AL RQLIFS CVL V+IPLGIGLAL+MP++GWK+SAALV+LAMPLLIPWNVVGTIW Sbjct: 61 DLQDALTRQLIFSLCVLAVEIPLGIGLALAMPSKGWKASAALVVLAMPLLIPWNVVGTIW 120 Query: 121 QIFGRADIGLGGYVLSRLGMDYNYASNSLDAWITVLVMDVWHWTPLVALLAFAGLRSIPD 180 QIFGR+DIGL GY L+R+G+DYNY S+S DAWITVL+MDVWHWTPLVALLA+AGLRSIPD Sbjct: 121 QIFGRSDIGLAGYWLNRMGVDYNYTSHSFDAWITVLIMDVWHWTPLVALLAYAGLRSIPD 180 Query: 181 AYYQAAQIDGASRWAVFRFIQLPKMRGVLVIAVLLRFMDSFMIYTEPFVLTGGGPGNSTT 240 A+YQAA+IDGASR AVFR+IQLPKMRGVL+I VLLRFMDSFMIYTEPFVLTGGGPGN+TT Sbjct: 181 AFYQAAEIDGASRLAVFRYIQLPKMRGVLMIGVLLRFMDSFMIYTEPFVLTGGGPGNATT 240 Query: 241 FLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLSFVLYNWMQSAGNGGQNTGANH 295 FLSQYLTQKAVGQFDLGPAAAFS++YFLIILL FVLYNWMQ G+ G +H Sbjct: 241 FLSQYLTQKAVGQFDLGPAAAFSIVYFLIILLFCFVLYNWMQRVGSASAAVGDDH 295