BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0164.p (206 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IUZ8.1 D8IUZ8_HERSS Diaminopimelate decarboxylase EC=4.1.1.20 352 1e-95 A6T3G4.1 A6T3G4_JANMA Diaminopimelate decarboxylase EC=4.1.1.20 347 6e-94 A4G9Q1.1 A4G9Q1_HERAR Diaminopimelate decarboxylase EC=4.1.1.20 340 9e-92 F1VZH0.1 F1VZH0_9BURK Diaminopimelate decarboxylase 313 1e-83 C3XCS2.1 C3XCS2_OXAFO Diaminopimelate decarboxylase EC=4.1.1.20 285 2e-75 >D8IUZ8.1 D8IUZ8_HERSS Diaminopimelate decarboxylase EC=4.1.1.20 Length = 430 Score = 352 bits (904), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 165/204 (80%), Positives = 182/204 (89%) Query: 1 VIELIDQLEAEGIAIHHLDIGGGIGITYDDEQPVPVGDYLGRLFTRIDAWRKEKYAGRAI 60 +I+++D LEAEGI IHHLDIGGGIGI YDDEQPV +GDYL R+F R+DAWR KY GR I Sbjct: 225 IIDMVDALEAEGIPIHHLDIGGGIGIRYDDEQPVAIGDYLARVFARVDAWRASKYQGRPI 284 Query: 61 KVMFEPGRSIVGNAGVLVTEVQYLKHGESKNFAVVDAAMNDLMRPALYEAWHGVQVVQQR 120 +VMFEPGRS+VGNAG+L+TEVQYLKHGE KNFAVVDAAMNDLMRPA+YEAWHGV+ V++ Sbjct: 285 QVMFEPGRSVVGNAGLLLTEVQYLKHGEGKNFAVVDAAMNDLMRPAMYEAWHGVKTVKEN 344 Query: 121 KDAARTYDVVGPVCESGDWLARSRELAIAPGDLLALMSAGAYGMTMASNYNTRGRAAEVL 180 R YDVVGPVCESGDWLARSRELAI GDLLALMSAGAYGMTMASNYNTRGRAAEVL Sbjct: 345 AGQPRIYDVVGPVCESGDWLARSRELAIGEGDLLALMSAGAYGMTMASNYNTRGRAAEVL 404 Query: 181 VDGDQAHLIRKRENPADLFALESI 204 VDG++AHLIR RENPADLFALE I Sbjct: 405 VDGERAHLIRARENPADLFALEKI 428 >A6T3G4.1 A6T3G4_JANMA Diaminopimelate decarboxylase EC=4.1.1.20 Length = 427 Score = 347 bits (890), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 162/204 (79%), Positives = 184/204 (90%) Query: 1 VIELIDQLEAEGIAIHHLDIGGGIGITYDDEQPVPVGDYLGRLFTRIDAWRKEKYAGRAI 60 +IELID L+AEGI +HHLDIGGGIGI YD++QPV VGDYL RLF +IDAWRK+K+ G I Sbjct: 222 LIELIDTLDAEGIHLHHLDIGGGIGINYDNDQPVAVGDYLARLFAKIDAWRKQKHGGAPI 281 Query: 61 KVMFEPGRSIVGNAGVLVTEVQYLKHGESKNFAVVDAAMNDLMRPALYEAWHGVQVVQQR 120 KV+FEPGRSIVGNAG+L+TEVQY+KHGE+KNFA+VDAAMNDLMRPA+YEAWHGV V+Q Sbjct: 282 KVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMRPAMYEAWHGVLPVKQS 341 Query: 121 KDAARTYDVVGPVCESGDWLARSRELAIAPGDLLALMSAGAYGMTMASNYNTRGRAAEVL 180 AA TYDVVGPVCESGDWLARSRELAI GDLLA+MSAGAYGMTM+SNYNTRGRAAEV+ Sbjct: 342 TAAAATYDVVGPVCESGDWLARSRELAIEEGDLLAIMSAGAYGMTMSSNYNTRGRAAEVM 401 Query: 181 VDGDQAHLIRKRENPADLFALESI 204 VDGD+ HLIRKRE +DLFALES+ Sbjct: 402 VDGDKVHLIRKREAASDLFALESL 425 >A4G9Q1.1 A4G9Q1_HERAR Diaminopimelate decarboxylase EC=4.1.1.20 Length = 427 Score = 340 bits (871), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 159/204 (77%), Positives = 182/204 (89%) Query: 1 VIELIDQLEAEGIAIHHLDIGGGIGITYDDEQPVPVGDYLGRLFTRIDAWRKEKYAGRAI 60 +IELID L AEGI IHHLDIGGGIGI YD+++PV VGDYL R+F ++DAWR + +AG I Sbjct: 222 LIELIDALAAEGIVIHHLDIGGGIGINYDNDKPVAVGDYLARVFAKVDAWRAKNHAGAPI 281 Query: 61 KVMFEPGRSIVGNAGVLVTEVQYLKHGESKNFAVVDAAMNDLMRPALYEAWHGVQVVQQR 120 KV+FEPGRSIVGNAG+L+TEVQY+KHGE+KNFA+VDAAMNDLMRPA+YEAWHGVQ V QR Sbjct: 282 KVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMRPAMYEAWHGVQPVLQR 341 Query: 121 KDAARTYDVVGPVCESGDWLARSRELAIAPGDLLALMSAGAYGMTMASNYNTRGRAAEVL 180 AA+TYDVVGPVCESGDWLARSRELAI GDLLA+MSAGAYGMTM+SNYNTRGRAAEV+ Sbjct: 342 HVAAQTYDVVGPVCESGDWLARSRELAIQEGDLLAIMSAGAYGMTMSSNYNTRGRAAEVM 401 Query: 181 VDGDQAHLIRKRENPADLFALESI 204 VDG HLIRKRE +DLFALE++ Sbjct: 402 VDGATVHLIRKRELASDLFALETL 425 >F1VZH0.1 F1VZH0_9BURK Diaminopimelate decarboxylase Length = 368 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/204 (73%), Positives = 170/204 (83%) Query: 1 VIELIDQLEAEGIAIHHLDIGGGIGITYDDEQPVPVGDYLGRLFTRIDAWRKEKYAGRAI 60 +IELID L AEGI IHHLDIGGG+GI Y+ E PV VGDYL RLF +ID WR EKY G I Sbjct: 163 LIELIDVLAAEGIVIHHLDIGGGLGIDYEAEVPVAVGDYLTRLFRKIDLWRAEKYQGVPI 222 Query: 61 KVMFEPGRSIVGNAGVLVTEVQYLKHGESKNFAVVDAAMNDLMRPALYEAWHGVQVVQQR 120 KV+FEPGRSIVGNAGVL+T V+YLK G KNFA+VDAAMNDLMRPA+Y+AWHGVQ V QR Sbjct: 223 KVLFEPGRSIVGNAGVLLTRVEYLKPGSEKNFAIVDAAMNDLMRPAMYQAWHGVQAVVQR 282 Query: 121 KDAARTYDVVGPVCESGDWLARSRELAIAPGDLLALMSAGAYGMTMASNYNTRGRAAEVL 180 A +DVVGPVCESGDWLAR+R L++ GDLLA+ SAGAYGMTM+SNYNTRGRAAEV+ Sbjct: 283 GGEAIVWDVVGPVCESGDWLARARTLSLEEGDLLAIHSAGAYGMTMSSNYNTRGRAAEVM 342 Query: 181 VDGDQAHLIRKRENPADLFALESI 204 VDG+ +HLIR+RE P LFALE I Sbjct: 343 VDGNVSHLIRQRETPEQLFALEKI 366 >C3XCS2.1 C3XCS2_OXAFO Diaminopimelate decarboxylase EC=4.1.1.20 Length = 428 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 140/204 (68%), Positives = 168/204 (82%) Query: 1 VIELIDQLEAEGIAIHHLDIGGGIGITYDDEQPVPVGDYLGRLFTRIDAWRKEKYAGRAI 60 ++ L+DQL EGI + H+DIGGGIGITYDDE+PV + DYL RLFTR++ WRK+K+ ++I Sbjct: 223 LLHLVDQLSEEGITLKHIDIGGGIGITYDDEKPVAISDYLTRLFTRVENWRKQKHPDQSI 282 Query: 61 KVMFEPGRSIVGNAGVLVTEVQYLKHGESKNFAVVDAAMNDLMRPALYEAWHGVQVVQQR 120 +MFEPGRSI GNAG+L+T+VQYLK KNFA+VDAAMNDLMRP+LYEAWH V V R Sbjct: 283 GLMFEPGRSISGNAGLLLTQVQYLKTNSDKNFAIVDAAMNDLMRPSLYEAWHKVLPVSNR 342 Query: 121 KDAARTYDVVGPVCESGDWLARSRELAIAPGDLLALMSAGAYGMTMASNYNTRGRAAEVL 180 K A +YD+VGPVCESGDWLA+ REL I D+LA+MSAGAYGM MASNYNTRGRAAEVL Sbjct: 343 KGEATSYDIVGPVCESGDWLAKQRELVIQADDILAIMSAGAYGMAMASNYNTRGRAAEVL 402 Query: 181 VDGDQAHLIRKRENPADLFALESI 204 VD A+LIR+RE P +LFALES+ Sbjct: 403 VDNGNAYLIRRRETPEELFALESV 426