BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0148.p         (105 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1U4.1 D8J1U4_HERSS Periplasmic or secreted lipoprotein             182   2e-44
Q0AIQ3.1 Q0AIQ3_NITEC Transport-associated protein                    140   5e-32
F1VUA2.1 F1VUA2_9BURK Transport-associated protein                    140   6e-32
Q47ED9.1 Q47ED9_DECAR Transport-associated protein                    139   1e-31
E1MI39.1 E1MI39_9GAMM Transport-associated protein                    138   3e-31

>D8J1U4.1 D8J1U4_HERSS Periplasmic or secreted lipoprotein
          Length = 109

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/103 (86%), Positives = 94/103 (91%)

Query: 3   LSLTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEIN 62
           +SLTKR  GFFLAL MVSLVGCASGPNKEGTGEYVDDAVITTKVK AI  E +LKS EIN
Sbjct: 6   MSLTKRFIGFFLALFMVSLVGCASGPNKEGTGEYVDDAVITTKVKAAIFNEKDLKSTEIN 65

Query: 63  VETYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           VETYKGVVQLSGFVSS+TAA+RATELARGVKGV SV+NDLRLK
Sbjct: 66  VETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVRNDLRLK 108


>Q0AIQ3.1 Q0AIQ3_NITEC Transport-associated protein
          Length = 104

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 69/101 (68%), Positives = 78/101 (77%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
           L      FFL L+MVSL+GCAS   + GTGEY+DD VITTKVK AI  EP LKSAEINVE
Sbjct: 4   LNNHFFTFFLTLLMVSLLGCASTAKQSGTGEYLDDTVITTKVKAAIFNEPILKSAEINVE 63

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           T+KGVVQLSGFVSS   A+RA E+AR V GV SVKND+R+K
Sbjct: 64  TFKGVVQLSGFVSSQVHANRAVEIARSVGGVKSVKNDMRIK 104


>F1VUA2.1 F1VUA2_9BURK Transport-associated protein
          Length = 103

 Score =  140 bits (353), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 81/101 (80%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
            +KRI+ FFLA  ++++ GCAS   KEGTGEYVDD VITTKVK A+L EP LKS EINVE
Sbjct: 3   FSKRISTFFLAAALIAVAGCASTSTKEGTGEYVDDTVITTKVKAALLNEPALKSREINVE 62

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           T+KGVVQLSGFV++   A+ A  LARGVKGV SVKND+R+K
Sbjct: 63  TFKGVVQLSGFVANQADATMAATLARGVKGVMSVKNDIRMK 103


>Q47ED9.1 Q47ED9_DECAR Transport-associated protein
          Length = 104

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 82/101 (81%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
            +K ++  FL+L +++ VGCAS    E TGEYVDDA+IT+KVK AIL E  LKSAEINVE
Sbjct: 4   FSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEINVE 63

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           TYKGVVQLSGFVSS  AAS+A E+AR VKGV+SVKND+R+K
Sbjct: 64  TYKGVVQLSGFVSSQAAASKAVEVARTVKGVSSVKNDMRIK 104


>E1MI39.1 E1MI39_9GAMM Transport-associated protein
          Length = 104

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/101 (67%), Positives = 79/101 (78%)

Query: 5   LTKRITGFFLALMMVSLVGCASGPNKEGTGEYVDDAVITTKVKTAILQEPNLKSAEINVE 64
           L +  + FFL L ++S  GCAS    EGTGEYVDD+VITTKVKTAIL EP L SAEINVE
Sbjct: 4   LIRVFSAFFLTLTLLSAAGCASTEKHEGTGEYVDDSVITTKVKTAILNEPGLSSAEINVE 63

Query: 65  TYKGVVQLSGFVSSATAASRATELARGVKGVTSVKNDLRLK 105
           T+KGVVQLSGFV+S    ++A E+AR VKGV SVKND+RLK
Sbjct: 64  TFKGVVQLSGFVTSRADINKAIEIARNVKGVNSVKNDMRLK 104