BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0147.p (214 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J1U5.1 D8J1U5_HERSS Virulence regulator protein 409 e-112 F1VUL8.1 F1VUL8_9BURK Two component transcriptional regulator, L... 368 e-100 A6T1A2.1 A6T1A2_JANMA DNA-binding response regulator, LuxR family 357 6e-97 A4G809.1 A4G809_HERAR Response regulator receiver, LuxR family 353 8e-96 Q477D0.1 Q477D0_CUPPJ Two component transcriptional regulator, L... 239 1e-61 >D8J1U5.1 D8J1U5_HERSS Virulence regulator protein Length = 209 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 196/209 (93%), Positives = 206/209 (98%) Query: 6 MTKILVVDDHAVVRAGVQHFIADIPNMEVGGEASTAEEAIRLVRTQEWDIVLLDIAMPDK 65 MTKILVVDDHAVVRAGV HFI++IP+ME+GGEASTAEEAIRLVRTQ+WDIVLLDIAMPDK Sbjct: 1 MTKILVVDDHAVVRAGVHHFISEIPSMEIGGEASTAEEAIRLVRTQDWDIVLLDIAMPDK 60 Query: 66 SGVEVLKQIKREKPNLPVLMLSMHPESRYAVQVLRSGASGYVQKEALATDLVSAINTILR 125 SGVEVLKQIKREKP LPVLMLSMHPESRYAVQVLRSGASGYVQKEALAT+LV+AINTILR Sbjct: 61 SGVEVLKQIKREKPELPVLMLSMHPESRYAVQVLRSGASGYVQKEALATELVNAINTILR 120 Query: 126 GHKYISYGVAELLTTDPVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTVS 185 GHKYISYGVAELLT++PVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTVS Sbjct: 121 GHKYISYGVAELLTSEPVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTVS 180 Query: 186 TYRSRVLQKMNMANNADIIYYAIKNNLID 214 TYRSRVLQKM+M NNADIIYYAIKNNLID Sbjct: 181 TYRSRVLQKMSMTNNADIIYYAIKNNLID 209 >F1VUL8.1 F1VUL8_9BURK Two component transcriptional regulator, LuxR family Length = 210 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/210 (83%), Positives = 197/210 (93%), Gaps = 1/210 (0%) Query: 6 MTKILVVDDHAVVRAGVQHFIADIPNMEVGGEASTAEEAIRLVRTQEWDIVLLDIAMPDK 65 MT+ILVVDDHAVVRAGV +FI DIP+ME+GGEA TAEEAIRL+R ++WDIV+LDIAMPDK Sbjct: 1 MTRILVVDDHAVVRAGVHYFIDDIPDMEIGGEAGTAEEAIRLIRAEDWDIVVLDIAMPDK 60 Query: 66 SGVEVLKQIKREKPNLPVLMLSMHPESRYAVQVLRSGASGYVQKEALATDLVSAINTILR 125 SGVEVLKQIKREKP+LPVL+LSMHPE+RYAVQ+LRSGASGYVQKEALAT+LV+AI TI+R Sbjct: 61 SGVEVLKQIKREKPDLPVLILSMHPENRYAVQILRSGASGYVQKEALATELVNAIQTIMR 120 Query: 126 GHKYISYGVAELLTTDP-VDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTV 184 GHKYISY VAELLT DP +++KPLHETLS REYEIFYKL QG+GVT+IADELCLSVKTV Sbjct: 121 GHKYISYAVAELLTMDPDTNADKPLHETLSAREYEIFYKLSQGEGVTKIADELCLSVKTV 180 Query: 185 STYRSRVLQKMNMANNADIIYYAIKNNLID 214 STYR+RVLQKMNM +NADIIYYAIK NLID Sbjct: 181 STYRARVLQKMNMTSNADIIYYAIKQNLID 210 >A6T1A2.1 A6T1A2_JANMA DNA-binding response regulator, LuxR family Length = 210 Score = 357 bits (916), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 174/210 (82%), Positives = 192/210 (91%), Gaps = 1/210 (0%) Query: 6 MTKILVVDDHAVVRAGVQHFIADIPNMEVGGEASTAEEAIRLVRTQEWDIVLLDIAMPDK 65 M KILVVDDHAVVRAGVQ+FIA +P+M++ GEA+TA+EAIRLVR Q+WDIVLLDI MPDK Sbjct: 1 MIKILVVDDHAVVRAGVQYFIAQVPDMKIEGEAATAQEAIRLVRAQDWDIVLLDINMPDK 60 Query: 66 SGVEVLKQIKREKPNLPVLMLSMHPESRYAVQVLRSGASGYVQKEALATDLVSAINTILR 125 SGVEVLKQIKREKP LPVL+LSMHPESRYAVQ+LRSGASGYVQKEALA +LV+AI TILR Sbjct: 61 SGVEVLKQIKREKPELPVLILSMHPESRYAVQILRSGASGYVQKEALAEELVNAIQTILR 120 Query: 126 GHKYISYGVAELLTTD-PVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTV 184 GHKYIS+ VAELLTT+ +EKPLHETLS+REYEIFYKL QG GVT+IADELCLSVKTV Sbjct: 121 GHKYISHTVAELLTTELDTSTEKPLHETLSKREYEIFYKLCQGHGVTKIADELCLSVKTV 180 Query: 185 STYRSRVLQKMNMANNADIIYYAIKNNLID 214 STYR+RVLQKMNM NNA IIYYAIK NLID Sbjct: 181 STYRARVLQKMNMENNAGIIYYAIKQNLID 210 >A4G809.1 A4G809_HERAR Response regulator receiver, LuxR family Length = 210 Score = 353 bits (906), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 174/211 (82%), Positives = 192/211 (90%), Gaps = 3/211 (1%) Query: 6 MTKILVVDDHAVVRAGVQHFIADIPNMEVGGEASTAEEAIRLVRTQEWDIVLLDIAMPDK 65 M KILVVDDHAVVRAGVQ+FIA +P+M + GEA+TA+EAIRLVR Q+WDIVLLDI MPDK Sbjct: 1 MIKILVVDDHAVVRAGVQYFIAQVPDMCIEGEAATAQEAIRLVRAQDWDIVLLDINMPDK 60 Query: 66 SGVEVLKQIKREKPNLPVLMLSMHPESRYAVQVLRSGASGYVQKEALATDLVSAINTILR 125 SGVEVLKQIKREKP LPVL+LSMHPESRYAVQ+LRSGASGYVQKEALA +LV+AI TILR Sbjct: 61 SGVEVLKQIKREKPELPVLILSMHPESRYAVQILRSGASGYVQKEALAEELVTAIQTILR 120 Query: 126 GHKYISYGVAELLTT--DPVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKT 183 GHKYIS+ VAELLT DP +++KPLHETLS+REYEIFYKL QG GVT+IADELCLSVKT Sbjct: 121 GHKYISHTVAELLTAEVDP-NADKPLHETLSKREYEIFYKLCQGHGVTKIADELCLSVKT 179 Query: 184 VSTYRSRVLQKMNMANNADIIYYAIKNNLID 214 VSTYR+RVLQKMNM NNA IIYYAIK NLID Sbjct: 180 VSTYRARVLQKMNMENNAGIIYYAIKQNLID 210 >Q477D0.1 Q477D0_CUPPJ Two component transcriptional regulator, LuxR family Length = 210 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 109/210 (51%), Positives = 164/210 (78%), Gaps = 1/210 (0%) Query: 6 MTKILVVDDHAVVRAGVQHFIADIPNMEVGGEASTAEEAIRLVRTQEWDIVLLDIAMPDK 65 M ++L+ DDH +VRAG++ F+AD P+++V GEA + +E + +R E+D+++LDI+MP++ Sbjct: 1 MIRVLIADDHEIVRAGLRQFLADEPDIQVTGEAGSGDEVMAQLRDGEFDVLVLDISMPER 60 Query: 66 SGVEVLKQIKREKPNLPVLMLSMHPESRYAVQVLRSGASGYVQKEALATDLVSAINTILR 125 +G++VLK I++ KP+LPVL+LS +PE +YA+ ++R+GASGY+ KE+ DLV AI T+ + Sbjct: 61 NGIDVLKLIRQRKPDLPVLILSTYPEDQYAINLIRAGASGYLTKESAPDDLVKAIRTVAQ 120 Query: 126 GHKYISYGVAELLTTD-PVDSEKPLHETLSQREYEIFYKLGQGQGVTQIADELCLSVKTV 184 G +Y+S VA+LL +E+P+H+ LS+RE++IF KL +GQ V+ IADEL LSVKTV Sbjct: 121 GRRYVSAAVADLLIGGLDKPTEQPVHQMLSEREFQIFCKLSRGQSVSVIADELFLSVKTV 180 Query: 185 STYRSRVLQKMNMANNADIIYYAIKNNLID 214 STYRSR+L+KM M NAD+ YYAIKN L++ Sbjct: 181 STYRSRILEKMGMKTNADLTYYAIKNGLVE 210