BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0138.p         (259 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E6V960.1 E6V960_VARPD Putative uncharacterized protein                251   7e-65
C5CUD3.1 C5CUD3_VARPS Putative uncharacterized protein                219   3e-55

>E6V960.1 E6V960_VARPD Putative uncharacterized protein
          Length = 279

 Score =  251 bits (641), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 125/245 (51%), Positives = 168/245 (68%), Gaps = 6/245 (2%)

Query: 18  SPALDRFSLSAGAYYVDPTFRVNANSHYGSYQSGDIDRDRTALPRVRAELLLFDSQGLSF 77
           SPALDRFSLS G +  DP    +  + YG+ Q+GDI   R  +PR+ A+LLL DSQG+SF
Sbjct: 38  SPALDRFSLSVGGFNADPKLEASVATPYGTLQTGDIKPGRVTMPRITADLLLGDSQGISF 97

Query: 78  DYFTYKKNYGGAINRTI---PVGTGSTLNGNGDANIQVDMASLAYKWWIGQGNDVFGIGL 134
           DY+ YK++YGG         P GT STL GN + N ++D A L+YKWW+G GN VFG+G 
Sbjct: 98  DYYQYKRDYGGQFGNNTSLGPFGTLSTL-GNANLNTKLDFAKLSYKWWLGSGNTVFGLGA 156

Query: 135 GAGYYRAKIDVNAAATLNGAAGTFSDSYSEKTWAPLLEVGWKHAFSKDLRLYAEASGVKK 194
           GA YYRA + + A A +NG  GT ++S S+   APLLE+G +HA + DLRL+A+ASGV K
Sbjct: 157 GAAYYRATLGITALAGVNGQVGTLNESSSDNAVAPLLEIGVRHAITPDLRLFADASGVWK 216

Query: 195 NWGRVTGHIYGAAVGAEWYPLANLGIGADYGITRIKINRDGGGAIDDANLDIRLKGPSAY 254
           + GR  G+IY A+ G EW+P+ N+G+   YG+T I + RDG  A  D+ L +RL+GPSA+
Sbjct: 217 SSGRFHGNIYNASAGVEWFPVKNVGLVVSYGVTNIDLTRDGSTA--DSRLKVRLQGPSAF 274

Query: 255 VKVRF 259
           +K RF
Sbjct: 275 LKARF 279


>C5CUD3.1 C5CUD3_VARPS Putative uncharacterized protein
          Length = 279

 Score =  219 bits (558), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 109/244 (44%), Positives = 158/244 (64%), Gaps = 4/244 (1%)

Query: 18  SPALDRFSLSAGAYYVDPTFRVNANSHYGSYQSGDIDRDRTALPRVRAELLLFDSQGLSF 77
           SPALDRFS SAGA+  DP F  + +S YG+ ++ D++  R  +PR+ A+LL+ DS GLSF
Sbjct: 38  SPALDRFSFSAGAFSADPKFNASVSSPYGALRTRDLEPGRVTMPRITADLLIGDSHGLSF 97

Query: 78  DYFTYKKNYGGAINRTIPVGTGSTLN--GNGDANIQVDMASLAYKWWIGQGNDVFGIGLG 135
           DY+ YK++Y G    +   G   T +  GN + N+++D A L+YKWW+G GN VFG+G G
Sbjct: 98  DYYRYKRDYFGQAAGSDSFGGFGTFSAVGNANINVKLDFAKLSYKWWLGSGNTVFGLGAG 157

Query: 136 AGYYRAKIDVNAAATLNGAAGTFSDSYSEKTWAPLLEVGWKHAFSKDLRLYAEASGVKKN 195
           A YY   +  NA   +NG   T ++  S+   APLLE+G +HA + DLRL+A+ SGV+K 
Sbjct: 158 AAYYSIDVGTNANVAVNGRIRTLNEDASDNAVAPLLELGVRHAINPDLRLFADLSGVRKG 217

Query: 196 WGRVTGHIYGAAVGAEWYPLANLGIGADYGITRIKINRDGGGAIDDANLDIRLKGPSAYV 255
            GR  G+IY A+ G EW+P+ N+G+   YG+T I + R    A  +  + ++L GPSA++
Sbjct: 218 GGRFHGNIYNASAGVEWFPVKNVGLVLAYGVTNIDLARQSSTA--ETRVKVKLHGPSAFL 275

Query: 256 KVRF 259
           K RF
Sbjct: 276 KARF 279