BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0131.p (304 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9C4L2.1 B9C4L2_9BURK Transcriptional regulator, LysR family 385 e-105 B9BKK6.1 B9BKK6_9BURK Transcriptional regulator, LysR family 385 e-105 B9B232.1 B9B232_9BURK Transcriptional regulator, LysR family 385 e-105 D8J0S0.1 D8J0S0_HERSS LysR family transcription regulator protein 385 e-105 A9AP78.1 A9AP78_BURM1 Transcriptional regulator, LysR family 385 e-105 >B9C4L2.1 B9C4L2_9BURK Transcriptional regulator, LysR family Length = 304 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 230/299 (76%), Gaps = 1/299 (0%) Query: 4 LSEQRLVYFFEAVQCGSVRAAADKLDIAPSAVSRQIALLEQEIAIPVMERHRRGVVPTEA 63 L+E R+ YFFEAV+CG++RAAAD LD+APSAVSRQIALLE E+ P++ERH RGV PTEA Sbjct: 6 LTESRIAYFFEAVRCGTIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEA 65 Query: 64 GQLLIDYYREQGAHQADLLSKLQGLRGLKRGHVSIVIGEGFVSDFMSRPMTYFCERHPQI 123 G+ +I YYREQ AH+ DLLS+LQ LRGL+ GHV +V+GEGFVSD +S PM FC ++P+I Sbjct: 66 GRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKI 125 Query: 124 SVSLDLAGTNDVLRMVAEDIAEIGLVYNPPADPKIVSRSVQRQPMMAVVSAN-SPLRNSK 182 V+LDL TNDV+ +AED EIGLVYNPP +P+IVSR+ RQPMMA+V A + K Sbjct: 126 RVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMARTIRRK 185 Query: 183 SCTLQELSEYPVGLMHTSYGTRQLLALAEYAAKIKLNPTLTTNSINVLKHFVKSELGVTL 242 S T+QEL+ YP+ H SYGTRQ+L E+A KI L P +TTNSIN++K F +SELG+ + Sbjct: 186 SLTVQELASYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSELGIVV 245 Query: 243 LPRFAVSTELAAGELFAIPLEDDVLAVAEVHLVTRVGRKLSVAANRFVSYSSSLMQAFQ 301 LP FAV++EL AGEL AIP+E +L AE HLVTRVGR LSVA+NR + SS M AF+ Sbjct: 246 LPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR 304 >B9BKK6.1 B9BKK6_9BURK Transcriptional regulator, LysR family Length = 304 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 230/299 (76%), Gaps = 1/299 (0%) Query: 4 LSEQRLVYFFEAVQCGSVRAAADKLDIAPSAVSRQIALLEQEIAIPVMERHRRGVVPTEA 63 L+E R+ YFFEAV+CG++RAAAD LD+APSAVSRQIALLE E+ P++ERH RGV PTEA Sbjct: 6 LTESRIAYFFEAVRCGTIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEA 65 Query: 64 GQLLIDYYREQGAHQADLLSKLQGLRGLKRGHVSIVIGEGFVSDFMSRPMTYFCERHPQI 123 G+ +I YYREQ AH+ DLLS+LQ LRGL+ GHV +V+GEGFVSD +S PM FC ++P+I Sbjct: 66 GRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKI 125 Query: 124 SVSLDLAGTNDVLRMVAEDIAEIGLVYNPPADPKIVSRSVQRQPMMAVVSAN-SPLRNSK 182 V+LDL TNDV+ +AED EIGLVYNPP +P+IVSR+ RQPMMA+V A + K Sbjct: 126 RVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMARTIRRK 185 Query: 183 SCTLQELSEYPVGLMHTSYGTRQLLALAEYAAKIKLNPTLTTNSINVLKHFVKSELGVTL 242 S T+QEL+ YP+ H SYGTRQ+L E+A KI L P +TTNSIN++K F +SELG+ + Sbjct: 186 SLTVQELASYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSELGIVV 245 Query: 243 LPRFAVSTELAAGELFAIPLEDDVLAVAEVHLVTRVGRKLSVAANRFVSYSSSLMQAFQ 301 LP FAV++EL AGEL AIP+E +L AE HLVTRVGR LSVA+NR + SS M AF+ Sbjct: 246 LPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR 304 >B9B232.1 B9B232_9BURK Transcriptional regulator, LysR family Length = 304 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 230/299 (76%), Gaps = 1/299 (0%) Query: 4 LSEQRLVYFFEAVQCGSVRAAADKLDIAPSAVSRQIALLEQEIAIPVMERHRRGVVPTEA 63 L+E R+ YFFEAV+CG++RAAAD LD+APSAVSRQIALLE E+ P++ERH RGV PTEA Sbjct: 6 LTESRIAYFFEAVRCGTIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEA 65 Query: 64 GQLLIDYYREQGAHQADLLSKLQGLRGLKRGHVSIVIGEGFVSDFMSRPMTYFCERHPQI 123 G+ +I YYREQ AH+ DLLS+LQ LRGL+ GHV +V+GEGFVSD +S PM FC ++P+I Sbjct: 66 GRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKI 125 Query: 124 SVSLDLAGTNDVLRMVAEDIAEIGLVYNPPADPKIVSRSVQRQPMMAVVSAN-SPLRNSK 182 V+LDL TNDV+ +AED EIGLVYNPP +P+IVSR+ RQPMMA+V A + K Sbjct: 126 RVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMARTIRRK 185 Query: 183 SCTLQELSEYPVGLMHTSYGTRQLLALAEYAAKIKLNPTLTTNSINVLKHFVKSELGVTL 242 S T+QEL+ YP+ H SYGTRQ+L E+A KI L P +TTNSIN++K F +SELG+ + Sbjct: 186 SLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSELGIVV 245 Query: 243 LPRFAVSTELAAGELFAIPLEDDVLAVAEVHLVTRVGRKLSVAANRFVSYSSSLMQAFQ 301 LP FAV++EL AGEL AIP+E +L AE HLVTRVGR LSVA+NR + SS M AF+ Sbjct: 246 LPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR 304 >D8J0S0.1 D8J0S0_HERSS LysR family transcription regulator protein Length = 304 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 183/299 (61%), Positives = 241/299 (80%), Gaps = 1/299 (0%) Query: 4 LSEQRLVYFFEAVQCGSVRAAADKLDIAPSAVSRQIALLEQEIAIPVMERHRRGVVPTEA 63 L++ R+ Y +EAV+ GSVRAAAD LDIAPSAVSRQI+LLEQE+A+P++ERH+RGV PTEA Sbjct: 5 LNDHRIAYLYEAVRTGSVRAAADALDIAPSAVSRQISLLEQELAVPLIERHKRGVSPTEA 64 Query: 64 GQLLIDYYREQGAHQADLLSKLQGLRGLKRGHVSIVIGEGFVSDFMSRPMTYFCERHPQI 123 G LL++YYREQ +HQ+D+L+KLQ +RGLKRG ++I++GEGF+SD +S P+ FC+++P+I Sbjct: 65 GALLLEYYREQRSHQSDVLAKLQEIRGLKRGSINIIMGEGFISDMVSGPIKQFCKKYPEI 124 Query: 124 SVSLDLAGTNDVLRMVAEDIAEIGLVYNPPADPKIVSRSVQRQPMMAVVSANSPLRNS-K 182 ++ LDLAGTN+V+ VA D AEIGLV+NPP + KIVSR+V RQPM A+V PL + Sbjct: 125 ALVLDLAGTNEVVSAVAADEAEIGLVFNPPVEAKIVSRAVARQPMYAIVGRQFPLLGKVE 184 Query: 183 SCTLQELSEYPVGLMHTSYGTRQLLALAEYAAKIKLNPTLTTNSINVLKHFVKSELGVTL 242 S TL+EL+ YP+ L H +YGTRQL+ A K +L PT+TTNSI +LKHFVKSELG TL Sbjct: 185 SVTLRELAGYPMALTHLAYGTRQLVEAATLIEKTRLTPTITTNSIAILKHFVKSELGFTL 244 Query: 243 LPRFAVSTELAAGELFAIPLEDDVLAVAEVHLVTRVGRKLSVAANRFVSYSSSLMQAFQ 301 LP FAV+TELAA EL+AIP+ + +LA +E HL+TR GR+LS AANR + + S+ M+AFQ Sbjct: 245 LPLFAVTTELAARELYAIPVRNALLARSEAHLITRTGRQLSTAANRLLQHLSTRMKAFQ 303 >A9AP78.1 A9AP78_BURM1 Transcriptional regulator, LysR family Length = 304 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 184/299 (61%), Positives = 230/299 (76%), Gaps = 1/299 (0%) Query: 4 LSEQRLVYFFEAVQCGSVRAAADKLDIAPSAVSRQIALLEQEIAIPVMERHRRGVVPTEA 63 L+E R+ YFFEAV+CG++RAAAD LD+APSAVSRQIALLE E+ P++ERH RGV PTEA Sbjct: 6 LTESRIAYFFEAVRCGAIRAAADWLDVAPSAVSRQIALLEAELDAPLIERHARGVTPTEA 65 Query: 64 GQLLIDYYREQGAHQADLLSKLQGLRGLKRGHVSIVIGEGFVSDFMSRPMTYFCERHPQI 123 G+ +I YYREQ AH+ DLLS+LQ LRGL+ GHV +V+GEGFVSD +S PM FC ++P+I Sbjct: 66 GRFVIQYYREQRAHRDDLLSRLQDLRGLRTGHVRVVLGEGFVSDLLSGPMQQFCTQYPKI 125 Query: 124 SVSLDLAGTNDVLRMVAEDIAEIGLVYNPPADPKIVSRSVQRQPMMAVVSAN-SPLRNSK 182 V+LDL TNDV+ +AED EIGLVYNPP +P+IVSR+ RQPMMA+V A + K Sbjct: 126 RVNLDLGSTNDVMTKIAEDDGEIGLVYNPPREPRIVSRAAHRQPMMAIVGARMARTIRRK 185 Query: 183 SCTLQELSEYPVGLMHTSYGTRQLLALAEYAAKIKLNPTLTTNSINVLKHFVKSELGVTL 242 S T+QEL+ YP+ H SYGTRQ+L E+A KI L P +TTNSIN++K F +SELG+ + Sbjct: 186 SLTVQELAAYPLAATHPSYGTRQMLQAVEFAEKISLEPAITTNSINIMKQFARSELGIVV 245 Query: 243 LPRFAVSTELAAGELFAIPLEDDVLAVAEVHLVTRVGRKLSVAANRFVSYSSSLMQAFQ 301 LP FAV++EL AGEL AIP+E +L AE HLVTRVGR LSVA+NR + SS M AF+ Sbjct: 246 LPAFAVASELKAGELKAIPIEHPILQNAEAHLVTRVGRTLSVASNRMLQMMSSQMSAFR 304