BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0115.p (442 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8INR3.1 D8INR3_HERSS Protein tolB 723 0.0 A6T0W0.1 A6T0W0_JANMA Protein tolB 662 0.0 A4G7Q1.1 A4G7Q1_HERAR Protein tolB 656 0.0 F1VX38.1 F1VX38_9BURK TolB protein 651 0.0 C3X4H1.1 C3X4H1_OXAFO Protein tolB 587 e-165 >D8INR3.1 D8INR3_HERSS Protein tolB Length = 428 Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/410 (84%), Positives = 383/410 (93%) Query: 33 GIAAASAAHAELRFEISGVGASQIPVAIAAFPGEEGAPQQITSIVKADLARSGVFKLIDN 92 G++ A A+ A++RFEI+GVGASQIP+AI AFPGEE APQQITS+VKADLARSGVFKLIDN Sbjct: 19 GLSFAPASQAQIRFEITGVGASQIPIAITAFPGEESAPQQITSVVKADLARSGVFKLIDN 78 Query: 93 SDSLSDASAINYGDWKNRGANALAVGSVQRLADGRFDVRYRLFDTIKAAQLSALSFGSQP 152 D+LSD+SA+NY DW+ RGANALAVGSV RLADGRFDVRYRLFDT++++QLSALS G+QP Sbjct: 79 GDALSDSSAVNYADWQKRGANALAVGSVTRLADGRFDVRYRLFDTVQSSQLSALSIGAQP 138 Query: 153 QLMRLTAHKIADDIYEKLTGIPGIFSTRIAYVTRSGKEYRLEVADADGEGVQVALRSNEP 212 QL+RLTAHKIADDIY+KLTGIPGIFSTRI+YVT+SG EYRLEVADADGEG QVALRSNEP Sbjct: 139 QLLRLTAHKIADDIYQKLTGIPGIFSTRISYVTKSGGEYRLEVADADGEGTQVALRSNEP 198 Query: 213 IISPSWSPDGGKVAYVSFEAKKPVIYIQNLVTRQRTLVANFKGSNSAPAWAPDGQRLAVA 272 IISPSWSPDG KVAYVSFE KKPV+YIQNLVTRQR++VANFKGSNSAPAW+PDG RLAVA Sbjct: 199 IISPSWSPDGTKVAYVSFEMKKPVVYIQNLVTRQRSIVANFKGSNSAPAWSPDGSRLAVA 258 Query: 273 LTRDGLTQVYVINADGSGLRRLTNTAGIDTEPRFSPDGNYVYFTSDRSGGPQIYKVSPNG 332 LTRDGLTQVYVINADGSGLRRLTN+AGIDTEP+FSPDG +YFTSDRSGGPQ+YKV +G Sbjct: 259 LTRDGLTQVYVINADGSGLRRLTNSAGIDTEPQFSPDGGSIYFTSDRSGGPQVYKVGLDG 318 Query: 333 GDAQRVTFGGSYNISPRISPDGKTLAFISRREGKFQLYALDLTNGQEQRLSDTVKDESPS 392 G QRVTF GSYNISPRISPDGKTLAFISRR+G+FQLYALDLTNGQE RLSD +D+SPS Sbjct: 319 GSPQRVTFNGSYNISPRISPDGKTLAFISRRDGQFQLYALDLTNGQEIRLSDGSRDQSPS 378 Query: 393 FSPNGKYIMYATESGRRGSLAIVSTDGRIKQRLTTQVGDIREPTWGPFMK 442 F+PNGKYIMYATE+GRRGSLA+VS DGRIKQRLTTQ GDIREPTWGPFMK Sbjct: 379 FAPNGKYIMYATEAGRRGSLAVVSVDGRIKQRLTTQAGDIREPTWGPFMK 428 >A6T0W0.1 A6T0W0_JANMA Protein tolB Length = 423 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 309/415 (74%), Positives = 367/415 (88%) Query: 28 ALTVMGIAAASAAHAELRFEISGVGASQIPVAIAAFPGEEGAPQQITSIVKADLARSGVF 87 + VM + + AHA+LR EI+GVGA+QIPVAIAAF E APQQ+++I+KADL RSG F Sbjct: 9 SFAVMALFITTLAHAQLRVEIAGVGANQIPVAIAAFGDETLAPQQVSAIIKADLLRSGFF 68 Query: 88 KLIDNSDSLSDASAINYGDWKNRGANALAVGSVQRLADGRFDVRYRLFDTIKAAQLSALS 147 K+ID L++ S +N DWK+RGA+A+ VGSV +LADGR++VRYRLFDT+K QLS+L+ Sbjct: 69 KIIDTGGVLTENSQLNLADWKSRGADAIVVGSVLKLADGRYEVRYRLFDTVKGTQLSSLA 128 Query: 148 FGSQPQLMRLTAHKIADDIYEKLTGIPGIFSTRIAYVTRSGKEYRLEVADADGEGVQVAL 207 SQPQ +R++AHK+ADD+YEKLTGI G F+TRIAYVT+S KE+RLE+AD+DGEG QVAL Sbjct: 129 LASQPQFLRVSAHKVADDVYEKLTGIKGAFATRIAYVTKSPKEFRLEIADSDGEGTQVAL 188 Query: 208 RSNEPIISPSWSPDGGKVAYVSFEAKKPVIYIQNLVTRQRTLVANFKGSNSAPAWAPDGQ 267 RSNEPIISPSWSPDG KVAYVSFE KKPV+YIQ+LV+R+RT+ ANFKGSNSAP+WAPDG Sbjct: 189 RSNEPIISPSWSPDGTKVAYVSFENKKPVVYIQDLVSRKRTVAANFKGSNSAPSWAPDGN 248 Query: 268 RLAVALTRDGLTQVYVINADGSGLRRLTNTAGIDTEPRFSPDGNYVYFTSDRSGGPQIYK 327 RLAVAL+RDGLTQVYV+NADG+GLRRL+++ GIDTEP+FS DG ++FTSDRSGGPQIYK Sbjct: 249 RLAVALSRDGLTQVYVVNADGTGLRRLSSSNGIDTEPQFSADGQSIFFTSDRSGGPQIYK 308 Query: 328 VSPNGGDAQRVTFGGSYNISPRISPDGKTLAFISRREGKFQLYALDLTNGQEQRLSDTVK 387 + NGG+A+RVTF GSYNISPRISPDGK LA+ISRREGKFQL+ LDLTNGQEQRLSDTVK Sbjct: 309 MGANGGEARRVTFSGSYNISPRISPDGKYLAYISRREGKFQLFLLDLTNGQEQRLSDTVK 368 Query: 388 DESPSFSPNGKYIMYATESGRRGSLAIVSTDGRIKQRLTTQVGDIREPTWGPFMK 442 DESPSFSPNGKY+MYATESGRRG+LA+VS DG++KQRLTTQ GDIREPTWGPFMK Sbjct: 369 DESPSFSPNGKYLMYATESGRRGTLAVVSVDGQVKQRLTTQAGDIREPTWGPFMK 423 >A4G7Q1.1 A4G7Q1_HERAR Protein tolB Length = 423 Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/415 (73%), Positives = 364/415 (87%) Query: 28 ALTVMGIAAASAAHAELRFEISGVGASQIPVAIAAFPGEEGAPQQITSIVKADLARSGVF 87 + ++ + S AHA+LR EI+GVGA+QIP+AIAAF E AP Q+++I+KADL RSG F Sbjct: 9 SFAILALFVTSLAHAQLRVEIAGVGANQIPIAIAAFGDESIAPHQVSAIIKADLLRSGYF 68 Query: 88 KLIDNSDSLSDASAINYGDWKNRGANALAVGSVQRLADGRFDVRYRLFDTIKAAQLSALS 147 K+ID L++ S +N DWK+RGA+AL VGSV RL DGRFDV+YRLFDTIK AQLS+L+ Sbjct: 69 KVIDTGTVLTENSQVNLADWKSRGADALVVGSVSRLPDGRFDVKYRLFDTIKQAQLSSLA 128 Query: 148 FGSQPQLMRLTAHKIADDIYEKLTGIPGIFSTRIAYVTRSGKEYRLEVADADGEGVQVAL 207 +QPQ +R++AHKIADDIYEKLTGI G F+TRIAYVT++GKE+RLE+AD+DGEG QVAL Sbjct: 129 LANQPQFIRVSAHKIADDIYEKLTGIRGAFATRIAYVTKAGKEFRLEIADSDGEGTQVAL 188 Query: 208 RSNEPIISPSWSPDGGKVAYVSFEAKKPVIYIQNLVTRQRTLVANFKGSNSAPAWAPDGQ 267 RSNEPIISP+WSPDG KVAYVSFE KKPV+YIQ+LV+R+RT+ ANFKGSNSAP+W+PDG Sbjct: 189 RSNEPIISPAWSPDGTKVAYVSFENKKPVVYIQDLVSRKRTVAANFKGSNSAPSWSPDGS 248 Query: 268 RLAVALTRDGLTQVYVINADGSGLRRLTNTAGIDTEPRFSPDGNYVYFTSDRSGGPQIYK 327 RLAVAL+RDGLTQVYV+NADG+ RRL+N+ GIDTEP++S DG +YFTSDRSGGPQIYK Sbjct: 249 RLAVALSRDGLTQVYVVNADGTNPRRLSNSNGIDTEPQYSADGQSIYFTSDRSGGPQIYK 308 Query: 328 VSPNGGDAQRVTFGGSYNISPRISPDGKTLAFISRREGKFQLYALDLTNGQEQRLSDTVK 387 + NGG+A+RVTF GSYNISPRISPDGK LA+ISRREGKFQL+ LDL NGQEQRLSDTVK Sbjct: 309 MGSNGGEARRVTFAGSYNISPRISPDGKFLAYISRREGKFQLFILDLNNGQEQRLSDTVK 368 Query: 388 DESPSFSPNGKYIMYATESGRRGSLAIVSTDGRIKQRLTTQVGDIREPTWGPFMK 442 DESPSFSPNGKY+MYATESGRRG+LA+VS DG++KQRLTTQ GDIREPTWGPFMK Sbjct: 369 DESPSFSPNGKYLMYATESGRRGTLAVVSVDGQVKQRLTTQSGDIREPTWGPFMK 423 >F1VX38.1 F1VX38_9BURK TolB protein Length = 421 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/414 (74%), Positives = 364/414 (87%), Gaps = 1/414 (0%) Query: 29 LTVMGIAAASAAHAELRFEISGVGASQIPVAIAAFPGEEGAPQQITSIVKADLARSGVFK 88 L ++G+ A+AAHA+LR +I+GVGA+QIP+AIA F E AP Q+++I+KADL RSG FK Sbjct: 9 LALLGLVLATAAHAQLRVDIAGVGANQIPIAIATFADESIAPAQVSAIIKADLMRSGYFK 68 Query: 89 LIDNSDSLSDASAINYGDWKNRGANALAVGSVQRLADGRFDVRYRLFDTIKAAQLSALSF 148 +ID + ++S+ S INY DWK+RGA+AL VGSVQRLADGRFDVRY+L D IK+A LSALS Sbjct: 69 IID-AGTMSETSEINYPDWKSRGADALVVGSVQRLADGRFDVRYKLLDMIKSAPLSALSL 127 Query: 149 GSQPQLMRLTAHKIADDIYEKLTGIPGIFSTRIAYVTRSGKEYRLEVADADGEGVQVALR 208 + R+TAHKIADDIYEKLTG+ G F+TRIAYVT+SGKEYRLEVADADGE VALR Sbjct: 128 TAPEGRTRVTAHKIADDIYEKLTGVRGAFATRIAYVTKSGKEYRLEVADADGEDTNVALR 187 Query: 209 SNEPIISPSWSPDGGKVAYVSFEAKKPVIYIQNLVTRQRTLVANFKGSNSAPAWAPDGQR 268 SNEPIISP+WSPDG +VAYVSFE KKPV+Y+QNLVTRQRT++AN+KGSNSAP+W+PDG R Sbjct: 188 SNEPIISPAWSPDGTRVAYVSFENKKPVVYVQNLVTRQRTVLANYKGSNSAPSWSPDGNR 247 Query: 269 LAVALTRDGLTQVYVINADGSGLRRLTNTAGIDTEPRFSPDGNYVYFTSDRSGGPQIYKV 328 LA+AL+RDGLTQ Y++NADG+GLRRLT+++GIDTEP+FS DG +YFTSDRSGGPQIYK+ Sbjct: 248 LAIALSRDGLTQSYIVNADGTGLRRLTSSSGIDTEPQFSADGQSIYFTSDRSGGPQIYKM 307 Query: 329 SPNGGDAQRVTFGGSYNISPRISPDGKTLAFISRREGKFQLYALDLTNGQEQRLSDTVKD 388 +GGDAQRVTF GSYNISPR+SPDGKTLA+ISRR+ FQLYA+DL NGQEQRLSD+ KD Sbjct: 308 PVSGGDAQRVTFKGSYNISPRVSPDGKTLAYISRRDSAFQLYAMDLANGQEQRLSDSAKD 367 Query: 389 ESPSFSPNGKYIMYATESGRRGSLAIVSTDGRIKQRLTTQVGDIREPTWGPFMK 442 ESPSFSPN KYIMYATESGRRGSLA+VS DGR+KQRLTTQ GDIREPTWGPF+K Sbjct: 368 ESPSFSPNSKYIMYATESGRRGSLAVVSVDGRVKQRLTTQAGDIREPTWGPFIK 421 >C3X4H1.1 C3X4H1_OXAFO Protein tolB Length = 429 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 273/409 (66%), Positives = 340/409 (83%) Query: 34 IAAASAAHAELRFEISGVGASQIPVAIAAFPGEEGAPQQITSIVKADLARSGVFKLIDNS 93 +A + A L +ISGVGA+QIPV IA F E APQ++T I++ADLAR+G+F+L+ Sbjct: 21 LAGKALAQEHLDIQISGVGATQIPVTIAGFANETVAPQKVTDIIRADLARTGLFRLVGTD 80 Query: 94 DSLSDASAINYGDWKNRGANALAVGSVQRLADGRFDVRYRLFDTIKAAQLSALSFGSQPQ 153 L +++ I+Y WK GA+AL VGSV++ ADG+ DVRYRLFD KA+QLSALS + Sbjct: 81 AILPESAFIDYPKWKANGADALVVGSVEKTADGKIDVRYRLFDLGKASQLSALSMVAPAP 140 Query: 154 LMRLTAHKIADDIYEKLTGIPGIFSTRIAYVTRSGKEYRLEVADADGEGVQVALRSNEPI 213 + R+TAHKIADDIYEKLTGI G+F+TRIAYV ++G EYRLE+AD+DGEG Q+ALRS EPI Sbjct: 141 MTRVTAHKIADDIYEKLTGIKGMFATRIAYVVKAGNEYRLEIADSDGEGRQLALRSKEPI 200 Query: 214 ISPSWSPDGGKVAYVSFEAKKPVIYIQNLVTRQRTLVANFKGSNSAPAWAPDGQRLAVAL 273 ISPSWSPDG KVAYVSFEAKKPV+Y+QNLVTR RT+VAN+KG+NSAP+W+PDG +LAVAL Sbjct: 201 ISPSWSPDGTKVAYVSFEAKKPVVYVQNLVTRARTVVANYKGNNSAPSWSPDGTKLAVAL 260 Query: 274 TRDGLTQVYVINADGSGLRRLTNTAGIDTEPRFSPDGNYVYFTSDRSGGPQIYKVSPNGG 333 +++G TQ+Y +NA+G LR+LT T I+TEP+FS DG ++YFTSDRSGGPQIYK+ NGG Sbjct: 261 SKNGYTQIYTVNANGGSLRQLTQTRSINTEPQFSADGKWIYFTSDRSGGPQIYKIGVNGG 320 Query: 334 DAQRVTFGGSYNISPRISPDGKTLAFISRREGKFQLYALDLTNGQEQRLSDTVKDESPSF 393 +AQRVTFG +YNISPR+SPDGK+LA+ISRR G FQLY +DL NGQE RLSDT +DESPSF Sbjct: 321 NAQRVTFGSNYNISPRVSPDGKSLAYISRRNGGFQLYLMDLENGQEMRLSDTARDESPSF 380 Query: 394 SPNGKYIMYATESGRRGSLAIVSTDGRIKQRLTTQVGDIREPTWGPFMK 442 SPNG++IMYAT SGRRG L++VS DGR++QRLT + D+REP+WGPFMK Sbjct: 381 SPNGQFIMYATGSGRRGVLSVVSVDGRVRQRLTMKAADVREPSWGPFMK 429