BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0107.p         (147 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8INS0.1 D8INS0_HERSS Transcriptional repressor NrdR                  258   2e-67
A4G7M3.1 NRDR_HERAR Transcriptional repressor NrdR                    249   7e-65
A6T0T5.1 NRDR_JANMA Transcriptional repressor NrdR                    248   2e-64
E5UD49.1 E5UD49_ALCXX Transcriptional repressor NrdR                  209   1e-52
Q2KV16.1 NRDR_BORA1 Transcriptional repressor NrdR                    204   3e-51

>D8INS0.1 D8INS0_HERSS Transcriptional repressor NrdR
          Length = 159

 Score =  258 bits (660), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 127/147 (86%), Positives = 138/147 (93%), Gaps = 1/147 (0%)

Query: 1   LDTRISEEGDAIRRRRRCANCDKRFTTYERIELTMPVIVKKNGSRSEFDPSKLRASLMLA 60
           LDTR+SE+G +IRRRRRC NCDKRFTTYERIELT+PVIVKKNGSR+EFDP+KLR SLMLA
Sbjct: 14  LDTRLSEDGHSIRRRRRCGNCDKRFTTYERIELTLPVIVKKNGSRTEFDPAKLRGSLMLA 73

Query: 61  LRKRPVSAEAVDAAIQSIQEKLLSSGAREVVSGQVGELVMRELKRLDKIAYIRFASVYKS 120
           LRKRPVSAEAVD AIQSIQ+KLL SG REV+SGQ+GELVMRELKRLDKIAYIRFASVYKS
Sbjct: 74  LRKRPVSAEAVDMAIQSIQDKLLQSGEREVMSGQIGELVMRELKRLDKIAYIRFASVYKS 133

Query: 121 FEDVTEFQDAIAEVGQERKAAAKKRND 147
           FEDV EFQDAIAEVGQERK  AK+R+D
Sbjct: 134 FEDVAEFQDAIAEVGQERK-GAKRRDD 159


>A4G7M3.1 NRDR_HERAR Transcriptional repressor NrdR
          Length = 156

 Score =  249 bits (637), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 122/143 (85%), Positives = 133/143 (93%)

Query: 1   LDTRISEEGDAIRRRRRCANCDKRFTTYERIELTMPVIVKKNGSRSEFDPSKLRASLMLA 60
           LDTRISEEGD+IRRRRRC +CDKRFTTYERIEL MPVIVKKNGSR++FDP KL+ASL LA
Sbjct: 14  LDTRISEEGDSIRRRRRCVSCDKRFTTYERIELAMPVIVKKNGSRTDFDPKKLQASLQLA 73

Query: 61  LRKRPVSAEAVDAAIQSIQEKLLSSGAREVVSGQVGELVMRELKRLDKIAYIRFASVYKS 120
           LRKRPVSAEAVDAAI  I++KLLSSG REVVSGQ+GELVMREL+RLDKIAYIRFASVYKS
Sbjct: 74  LRKRPVSAEAVDAAIHRIEQKLLSSGEREVVSGQIGELVMRELQRLDKIAYIRFASVYKS 133

Query: 121 FEDVTEFQDAIAEVGQERKAAAK 143
           FEDV EFQDAIAEVG+ERK  +K
Sbjct: 134 FEDVAEFQDAIAEVGRERKPPSK 156


>A6T0T5.1 NRDR_JANMA Transcriptional repressor NrdR
          Length = 155

 Score =  248 bits (633), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 132/141 (93%)

Query: 1   LDTRISEEGDAIRRRRRCANCDKRFTTYERIELTMPVIVKKNGSRSEFDPSKLRASLMLA 60
           LDTR+SEEGD+IRRRRRC +CDKRFTTYERIELTMPV+VKKNGSR++FDP KL+ SL LA
Sbjct: 14  LDTRVSEEGDSIRRRRRCTSCDKRFTTYERIELTMPVVVKKNGSRTDFDPKKLQGSLQLA 73

Query: 61  LRKRPVSAEAVDAAIQSIQEKLLSSGAREVVSGQVGELVMRELKRLDKIAYIRFASVYKS 120
           LRKRPVSAEAVDAAI  I++KLLSSG REV+SGQ+GELVMREL+RLDKIAYIRFASVYKS
Sbjct: 74  LRKRPVSAEAVDAAIHRIEQKLLSSGEREVISGQIGELVMRELQRLDKIAYIRFASVYKS 133

Query: 121 FEDVTEFQDAIAEVGQERKAA 141
           FEDV EFQDAIAEVG+ERK A
Sbjct: 134 FEDVAEFQDAIAEVGRERKPA 154


>E5UD49.1 E5UD49_ALCXX Transcriptional repressor NrdR
          Length = 159

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 97/134 (72%), Positives = 119/134 (88%)

Query: 1   LDTRISEEGDAIRRRRRCANCDKRFTTYERIELTMPVIVKKNGSRSEFDPSKLRASLMLA 60
           +D+R+SEEGDAIRRRRRC +CDKRFTTYER+EL MP +VK+NGSRS++DP+KLRASL LA
Sbjct: 14  VDSRVSEEGDAIRRRRRCQSCDKRFTTYERVELAMPSVVKRNGSRSDYDPAKLRASLSLA 73

Query: 61  LRKRPVSAEAVDAAIQSIQEKLLSSGAREVVSGQVGELVMRELKRLDKIAYIRFASVYKS 120
           LRKRPVS E VDAA+  I+E+LL+SG REV SG +GELVM EL++LDK+AY+RFASVYKS
Sbjct: 74  LRKRPVSTEDVDAAVARIEEQLLASGLREVASGHIGELVMNELRKLDKVAYVRFASVYKS 133

Query: 121 FEDVTEFQDAIAEV 134
           FED+ EF +AI E+
Sbjct: 134 FEDIGEFVEAIREM 147


>Q2KV16.1 NRDR_BORA1 Transcriptional repressor NrdR
          Length = 160

 Score =  204 bits (519), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 98/147 (66%), Positives = 119/147 (80%)

Query: 1   LDTRISEEGDAIRRRRRCANCDKRFTTYERIELTMPVIVKKNGSRSEFDPSKLRASLMLA 60
           +D+R+SEEGD IRRRRRC +CDKRFTTYER+EL MP +VK++GSRSE+D +KLR SL LA
Sbjct: 14  VDSRVSEEGDTIRRRRRCLSCDKRFTTYERVELAMPTVVKRDGSRSEYDAAKLRGSLALA 73

Query: 61  LRKRPVSAEAVDAAIQSIQEKLLSSGAREVVSGQVGELVMRELKRLDKIAYIRFASVYKS 120
           LRKRPVS E VD A+  I++ LL+SGAREV S  +GELVM ELKRLDK+AY+RFASVYKS
Sbjct: 74  LRKRPVSTEEVDGAVARIEDTLLASGAREVASEHIGELVMNELKRLDKVAYVRFASVYKS 133

Query: 121 FEDVTEFQDAIAEVGQERKAAAKKRND 147
           FED+ EF +AI E+   R  A K R +
Sbjct: 134 FEDIGEFVEAIREMQGPRLGAGKLRKE 160