BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0096.p (227 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6T1G9.1 A6T1G9_JANMA OmpA family protein 190 1e-46 A4G867.1 A4G867_HERAR Putative outer membrane protein OmpA 189 4e-46 Q82S16.1 Q82S16_NITEU Bacterial outer membrane protein 113 2e-23 Q2Y6Z1.1 Q2Y6Z1_NITMU OmpA/MotB 111 8e-23 Q0AD70.1 Q0AD70_NITEC OmpA/MotB domain protein 109 3e-22 >A6T1G9.1 A6T1G9_JANMA OmpA family protein Length = 222 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 97/221 (43%), Positives = 136/221 (61%), Gaps = 5/221 (2%) Query: 8 LFGLLLGATTLSAYAQGNTNIAATPTAAYGQDNQGSVARSQYGLCWRTGYWTPSDSLTGC 67 + GLLLGA+ S+Y T+I P AY QD++G V RS +GLCWR+G WTP D++ GC Sbjct: 6 VLGLLLGAS--SSYVAAQTDIQVPPNNAYAQDSRGVVTRSAFGLCWRSGTWTPGDAVAGC 63 Query: 68 DGELAPLITNPIAPALVSNPAAITVNAAVSANGTNCDFSITLNESQTFGSGKTTLNKAAQ 127 DG L I NP AP + S+ AA++AN +CDF+I L QTFG + LN+AA+ Sbjct: 64 DGALVSPIPNPTAPEVASHLDGKVAPAAIAAN--SCDFTIALESDQTFGLNQAVLNRAAK 121 Query: 128 QRIQAQVVEKLPTC-GIDAIVVTGHADRLGSRKHNEEIALKRAEAVAAFLKSKSVAAPIQ 186 RI V+ KL C G + +TG+ D LG+ + N+ ++ KRA AVA +LK K V ++ Sbjct: 122 SRIDRDVLPKLTACNGASGMTITGYTDLLGNARSNQALSEKRAAAVADYLKKKGVTVNMK 181 Query: 187 IVGAGSNEPVAQCGQNLPARKLTACLSPDRRVVIHVQGHEK 227 + G G+++PV C L KL ACL+P+RRV+I + K Sbjct: 182 VTGVGASQPVKDCDSKLNRTKLVACLAPNRRVLIEMHNLPK 222 >A4G867.1 A4G867_HERAR Putative outer membrane protein OmpA Length = 225 Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 137/218 (62%), Gaps = 2/218 (0%) Query: 11 LLLGATTLSAYAQGNTNIAATPTAAYGQDNQGSVARSQYGLCWRTGYWTPSDSLTGCDGE 70 LL+G A AQ +T+I A +Y QD +G++ RS YGLCWR+G+WTP D++ GCDG Sbjct: 9 LLVGVAPSYAAAQSSTDIQAPSNHSYNQDGRGTITRSDYGLCWRSGFWTPDDAVAGCDGA 68 Query: 71 LAPLITNPIAPALVSNPAAITVNAAVSANGTNCDFSITLNESQTFGSGKTTLNKAAQQRI 130 LA I NP AP + ++ + ++A C+ ++ L QTF K LNKAA+Q+I Sbjct: 69 LASPIPNPTAPEMANSLEKERQSMPLAAKPL-CNVTLALASDQTFAFNKAVLNKAAKQQI 127 Query: 131 QAQVVEKLPTC-GIDAIVVTGHADRLGSRKHNEEIALKRAEAVAAFLKSKSVAAPIQIVG 189 +V+ L C GID I +TGH D LG+ + N+ ++ KRA +VA +LK+K V+ + ++G Sbjct: 128 DQKVLPILAECKGIDGITITGHTDHLGASRSNQILSEKRAASVAGYLKTKGVSTKMNVLG 187 Query: 190 AGSNEPVAQCGQNLPARKLTACLSPDRRVVIHVQGHEK 227 AG + V C + LP KL ACL+P+RRV+I V GH + Sbjct: 188 AGETQGVKLCDEKLPHGKLIACLAPNRRVLIEVHGHPR 225 >Q82S16.1 Q82S16_NITEU Bacterial outer membrane protein Length = 231 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/224 (32%), Positives = 103/224 (45%), Gaps = 19/224 (8%) Query: 5 FPGLFGLLLGATTLSAYAQGNTNIAATPTA-AYGQDNQGSVARSQYGLCWRTGYWTPSDS 63 PGL L GA + + + ++A A AY D++G VAR+ GLCWRTGYWTP+ + Sbjct: 17 LPGL--LASGAVMANTHEEERQGLSAVDKAEAYAVDDRGVVARNSTGLCWRTGYWTPAKA 74 Query: 64 LTGCDGELAPLITNPIAPALVSNPAAITVNAAVSANGTNCDFSITLNESQTFGSGKTTLN 123 + CD P LV P + ++ + F K L Sbjct: 75 IYECD------------PDLVKQPEQVVEAPPPVVPVVTEPEKVSFSADALFDFDKAVLK 122 Query: 124 KAAQQRIQAQVVEKLPTCGIDAIVVTGHADRLGSRKHNEEIALKRAEAVAAFLKSKSVAA 183 A +Q + L D I+ G+ DR+GS +N+ +++KRAEAV ++L SK + + Sbjct: 123 PAGKQALD-DFAANLEGVNYDLIIAVGYTDRIGSEAYNKNLSIKRAEAVKSYLVSKGIGS 181 Query: 184 P-IQIVGAGSNEPVA--QCGQNLPARKLTACLSPDRRVVIHVQG 224 I G G PV C R L CL+PDRRV I V G Sbjct: 182 DRIFTDGKGEANPVTGDSCHGTKATRALIDCLAPDRRVEIEVAG 225 >Q2Y6Z1.1 Q2Y6Z1_NITMU OmpA/MotB Length = 225 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 101/218 (46%), Gaps = 11/218 (5%) Query: 11 LLLGATTLSAYAQGNTNIAATPTAAYGQDNQGSVARSQYGLCWRTGYWTPSDSLTGCDGE 70 LLLGA L G P A Y D+ G V R G CWRTGYWTP+ + CD + Sbjct: 9 LLLGAAVLPVLFSGVAMAQEIPEA-YAVDSVGEVVRDSSGDCWRTGYWTPAMATYECDPD 67 Query: 71 LAPLITNPIAPALVSNPAAITVNAAVSANGTNCDFSITLNESQTFGSGKTTLNKAAQQRI 130 L P + A + I+L+ Q F K L +Q + Sbjct: 68 LLPKPEKKVEAPAPEPTPAPAPAPVYTEPE-----KISLSADQLFDFDKANLRPEGKQTL 122 Query: 131 QAQVVEKLPTCGIDAIVVTGHADRLGSRKHNEEIALKRAEAVAAFL-KSKSVAAP-IQIV 188 +V KL D IV G+ADRLGS +N++++++RAE+V A+L K + A I I Sbjct: 123 D-DLVAKLGGVKYDTIVAIGYADRLGSDAYNKKLSMRRAESVKAYLVNEKGIPADRIFID 181 Query: 189 GAGSNEPVA--QCGQNLPARKLTACLSPDRRVVIHVQG 224 G G PV C N + L ACL PDRRV + V G Sbjct: 182 GKGEANPVTGDTCKGNKKTKALIACLQPDRRVEVEVAG 219 >Q0AD70.1 Q0AD70_NITEC OmpA/MotB domain protein Length = 231 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/199 (33%), Positives = 90/199 (45%), Gaps = 16/199 (8%) Query: 29 AATPTAAYGQDNQGSVARSQYGLCWRTGYWTPSDSLTGCDGELAPLITNPIAPALVSNPA 88 AA AY D+ G VAR+ GLCWRTGYWTP+ ++ CD P LV P Sbjct: 40 AADKAEAYAVDDNGVVARNSTGLCWRTGYWTPAKAIYECD------------PDLVKQPE 87 Query: 89 AITVNAAVSANGTNCDFSITLNESQTFGSGKTTLNKAAQQRIQAQVVEKLPTCGIDAIVV 148 + ++ + F K L A Q + L D I+ Sbjct: 88 QVVEAPPPVVPVVTEPEKVSFSADALFDFDKAVLKPAGMQALD-DFSRNLEGVNYDLIIA 146 Query: 149 TGHADRLGSRKHNEEIALKRAEAVAAFLKSKSVAAP-IQIVGAGSNEPVA--QCGQNLPA 205 G+ DR+GS +N++++++RAEAV +L SK + A I G G PV C Sbjct: 147 VGYTDRIGSEAYNKKLSVRRAEAVKNYLVSKGIGADRIFTDGKGKANPVTGDSCQGTKAT 206 Query: 206 RKLTACLSPDRRVVIHVQG 224 R L CL+PDRRV I V G Sbjct: 207 RTLINCLAPDRRVEIEVAG 225