BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0075.p (407 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IR33.1 D8IR33_HERSS DNA polymerase III (Subunits tau and gamma... 704 0.0 A4G3Y8.1 A4G3Y8_HERAR DNA polymerase III subunit tau EC=2.7.7.7 699 0.0 A6T0H3.1 A6T0H3_JANMA DNA polymerase III gamma and tau subunit E... 699 0.0 Q1LLG8.1 Q1LLG8_RALME DNA polymerase III tau/gamma subunit EC=2.... 628 e-178 D8N404.1 D8N404_RALSO DNA polymerase III subunits gamma and tau ... 614 e-173 >D8IR33.1 D8IR33_HERSS DNA polymerase III (Subunits tau and gamma) protein EC=2.7.7.7 Length = 712 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/370 (91%), Positives = 352/370 (95%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 SLNC GPDG GGITA PCGVC+ACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQA+YAP Sbjct: 61 SLNCVGPDGAGGITAAPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFN+MLKTLEEPPEH+KFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHIKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHII HLDNIL QE IEF+APALRLLAQGA GSMRDALSLTDQAIAYAAGKVTLE Sbjct: 181 KQMPPGHIIGHLDNILNQEGIEFDAPALRLLAQGASGSMRDALSLTDQAIAYAAGKVTLE 240 Query: 241 AVQGMLGALDQSYLIRVLDALAAQDGSGLLAVADEMATRSLSYNAALQDLATLLHQIALA 300 AVQGMLGALDQSYLIR+LDALA QDG+ LL VAD+MATRSLSYNAALQDL TLLHQIALA Sbjct: 241 AVQGMLGALDQSYLIRILDALAVQDGAALLGVADDMATRSLSYNAALQDLGTLLHQIALA 300 Query: 301 QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPAALA+DLP REDI+RL+ QFS E QLFYQI VHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QAVPAALADDLPNREDILRLSGQFSPEHVQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRPVAANA 370 LAFRPV+A+A Sbjct: 361 LAFRPVSASA 370 >A4G3Y8.1 A4G3Y8_HERAR DNA polymerase III subunit tau EC=2.7.7.7 Length = 682 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/365 (91%), Positives = 351/365 (96%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHALE +RLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALENKRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 S NC GPDGNG ITA PCGVC+ACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP Sbjct: 61 SFNCIGPDGNGDITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI++HLD+ILGQE IEFE PALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE Sbjct: 181 KQMPPGHIVAHLDDILGQEQIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 Query: 241 AVQGMLGALDQSYLIRVLDALAAQDGSGLLAVADEMATRSLSYNAALQDLATLLHQIALA 300 AVQGMLGALDQS+LIR+LDALA +DG+GLLAVADEMATRSLSYNAALQDL +LLH+IALA Sbjct: 241 AVQGMLGALDQSFLIRLLDALAQKDGAGLLAVADEMATRSLSYNAALQDLGSLLHRIALA 300 Query: 301 QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM 360 QTVPAAL +DLP+R+D++RLA+ F AEE QLFYQI VHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QTVPAALPDDLPERDDVLRLAALFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRP 365 LAFRP Sbjct: 361 LAFRP 365 >A6T0H3.1 A6T0H3_JANMA DNA polymerase III gamma and tau subunit EC=2.7.7.7 Length = 673 Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/365 (91%), Positives = 350/365 (95%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARKYRP+SFDTLVGQEHVVRALTHAL+ QRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKYRPKSFDTLVGQEHVVRALTHALDNQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 S NC GPDGNGGIT+ PCGVC+ACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP Sbjct: 61 SFNCVGPDGNGGITSTPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+SHLDNILGQENIEFE PALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTL+ Sbjct: 181 KQMPPGHIVSHLDNILGQENIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLD 240 Query: 241 AVQGMLGALDQSYLIRVLDALAAQDGSGLLAVADEMATRSLSYNAALQDLATLLHQIALA 300 AVQGMLGALDQS+LIR+LDALA +DG+GLLAVADEMATRSLSYNAALQDL TLLH++ALA Sbjct: 241 AVQGMLGALDQSFLIRLLDALAEKDGAGLLAVADEMATRSLSYNAALQDLCTLLHRVALA 300 Query: 301 QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM 360 QTVPAA+ EDLP+ D++RLA F AEE QLFYQI VHGRNELGLAPDEYAGFSMTLLRM Sbjct: 301 QTVPAAVPEDLPEYADVMRLAGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM 360 Query: 361 LAFRP 365 LAFRP Sbjct: 361 LAFRP 365 >Q1LLG8.1 Q1LLG8_RALME DNA polymerase III tau/gamma subunit EC=2.7.7.7 Length = 795 Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust. Identities = 295/372 (79%), Positives = 333/372 (89%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 1 MSYQVLARKWRPRDFTTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 Query: 61 SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 +LNC GPDGNGGITAQPCG C AC ID+GRFVDYIEMDAASNRGVDEMAQLL++A+YAP Sbjct: 61 ALNCTGPDGNGGITAQPCGQCKACTEIDSGRFVDYIEMDAASNRGVDEMAQLLDKAIYAP 120 Query: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFN+MLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL Sbjct: 121 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 Query: 181 KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+SHLD+IL QE I + ALRLLAQ AHGSMRDALSLTDQAIAY+AG+V+ E Sbjct: 181 KQMPPGHIVSHLDHILAQEGISHDGSALRLLAQAAHGSMRDALSLTDQAIAYSAGQVSEE 240 Query: 241 AVQGMLGALDQSYLIRVLDALAAQDGSGLLAVADEMATRSLSYNAALQDLATLLHQIALA 300 AV+GMLGA+DQSYL+++LDALAA+DG+ +L +AD MA RSLS+ ALQDL +LLH++ALA Sbjct: 241 AVRGMLGAIDQSYLVQLLDALAAEDGATMLGIADSMADRSLSFAGALQDLGSLLHKVALA 300 Query: 301 QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPA++ ++ P+ ED+ RLA QF A+E QLFYQI GR+EL LAPDEYAGF+MTLLRM Sbjct: 301 QAVPASVQDEWPEAEDVRRLARQFDAQETQLFYQIANLGRSELALAPDEYAGFTMTLLRM 360 Query: 361 LAFRPVAANAAA 372 LAFRP A A++ Sbjct: 361 LAFRPSTAPASS 372 >D8N404.1 D8N404_RALSO DNA polymerase III subunits gamma and tau EC=2.7.7.7 Length = 763 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 293/365 (80%), Positives = 324/365 (88%) Query: 1 MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 60 MSYQVLARK+RPR F TLVGQEHVV+ALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK Sbjct: 32 MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK 91 Query: 61 SLNCQGPDGNGGITAQPCGVCDACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP 120 SLNC G DG GGITAQPCGVC AC IDAGRFVDYIEMDAASNRGVDEMAQLL++AVYAP Sbjct: 92 SLNCIGTDGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP 151 Query: 121 SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 180 + RFKVYMIDEVHMLTNHAFN+MLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL Sbjct: 152 TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL 211 Query: 181 KQMPPGHIISHLDNILGQENIEFEAPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE 240 KQMPPGHI+SHLD ILG+E I E ALRLLA A GSMRDALSLTDQAIAY+AG+V+ Sbjct: 212 KQMPPGHIVSHLDRILGEEGIAHEPNALRLLASAAQGSMRDALSLTDQAIAYSAGEVSEA 271 Query: 241 AVQGMLGALDQSYLIRVLDALAAQDGSGLLAVADEMATRSLSYNAALQDLATLLHQIALA 300 AV+GMLGA+DQSYL+RVLDALA ++G+ L+ +ADEMA RSLS++ ALQDLA+LL +IALA Sbjct: 272 AVRGMLGAIDQSYLVRVLDALADENGAALIEIADEMAGRSLSFSGALQDLASLLQKIALA 331 Query: 301 QTVPAALAEDLPQREDIVRLASQFSAEEAQLFYQIVVHGRNELGLAPDEYAGFSMTLLRM 360 Q VPAA+ +D P+ +DI RLA +F A+ QLFYQ GRNEL LAPDEYAGF+MTLLRM Sbjct: 332 QVVPAAVQDDWPEADDIRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRM 391 Query: 361 LAFRP 365 LAF+P Sbjct: 392 LAFQP 396