BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0071.p         (171 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IR30.1 D8IR30_HERSS Recombination protein recR                      318   1e-85
A4G3Z0.2 RECR_HERAR Recombination protein recR                        307   3e-82
A6T0H1.1 RECR_JANMA Recombination protein recR                        306   8e-82
F1W0G8.1 F1W0G8_9BURK Recombination protein RecR                      296   7e-79
C3XBH7.1 C3XBH7_OXAFO Recombination protein recR                      278   2e-73

>D8IR30.1 D8IR30_HERSS Recombination protein recR
          Length = 198

 Score =  318 bits (816), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 151/171 (88%), Positives = 163/171 (95%)

Query: 1   MAYHLLQHDRDGALQLSRALAQAAETIRHCALCNTFTEQVICDTCQDGGRDTTTLCVVET 60
           MAYHLLQHDRD A  LS++LA+A +TIRHCALCNTFTEQV+C+TCQD  RD T LCVVE+
Sbjct: 28  MAYHLLQHDRDAAADLSQSLAKALDTIRHCALCNTFTEQVVCETCQDSQRDHTQLCVVES 87

Query: 61  PSDQLMIEQTLTFKGLYFVLMGRLSPLDGVGPKDIHIEKLITRATDGVVAEVVLATNFTN 120
           PSDQ+MIEQTLTFKGLYFVLMGRLSPLDG+GP+DIH+EKLITRATDGVV+EVVLATNFTN
Sbjct: 88  PSDQVMIEQTLTFKGLYFVLMGRLSPLDGIGPRDIHLEKLITRATDGVVSEVVLATNFTN 147

Query: 121 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 171
           EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT
Sbjct: 148 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 198


>A4G3Z0.2 RECR_HERAR Recombination protein recR
          Length = 198

 Score =  307 bits (787), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 156/171 (91%)

Query: 1   MAYHLLQHDRDGALQLSRALAQAAETIRHCALCNTFTEQVICDTCQDGGRDTTTLCVVET 60
           MAYHL+QHDRDGA  L RAL+QA E ++HCA+CNTFTE  +C+TC D  R+   LCVVET
Sbjct: 28  MAYHLMQHDRDGAAMLGRALSQAVERVQHCAMCNTFTESAVCETCLDAERNAALLCVVET 87

Query: 61  PSDQLMIEQTLTFKGLYFVLMGRLSPLDGVGPKDIHIEKLITRATDGVVAEVVLATNFTN 120
           P DQLMIEQTLTFKGLYFVLMGRLSPLDG+GPKDIH+EKLI+RATDG+V EVVLATNFTN
Sbjct: 88  PGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLISRATDGIVQEVVLATNFTN 147

Query: 121 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 171
           EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT
Sbjct: 148 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 198


>A6T0H1.1 RECR_JANMA Recombination protein recR
          Length = 198

 Score =  306 bits (783), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 144/171 (84%), Positives = 156/171 (91%)

Query: 1   MAYHLLQHDRDGALQLSRALAQAAETIRHCALCNTFTEQVICDTCQDGGRDTTTLCVVET 60
           MAYHL+QHDRDGA  L RAL+QA E ++HCA+CNTFTE  +C+TC D  R+   LCVVET
Sbjct: 28  MAYHLMQHDRDGAAMLGRALSQAVEKVQHCAMCNTFTEHEVCETCLDAERNPALLCVVET 87

Query: 61  PSDQLMIEQTLTFKGLYFVLMGRLSPLDGVGPKDIHIEKLITRATDGVVAEVVLATNFTN 120
           P DQLMIEQTLTFKGLYFVLMGRLSPLDG+GPKDIH+EKLI+RATDG+V EVVLATNFTN
Sbjct: 88  PGDQLMIEQTLTFKGLYFVLMGRLSPLDGIGPKDIHLEKLISRATDGIVQEVVLATNFTN 147

Query: 121 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 171
           EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT
Sbjct: 148 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 198


>F1W0G8.1 F1W0G8_9BURK Recombination protein RecR
          Length = 198

 Score =  296 bits (758), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 139/171 (81%), Positives = 155/171 (90%)

Query: 1   MAYHLLQHDRDGALQLSRALAQAAETIRHCALCNTFTEQVICDTCQDGGRDTTTLCVVET 60
           +AYHL+QHDRDGA QL RAL QA + ++HC+ CNTFTE ++C+TC D  RD T LCVVET
Sbjct: 28  IAYHLMQHDRDGAEQLGRALLQAVDRVQHCSRCNTFTEHLVCETCLDPERDATLLCVVET 87

Query: 61  PSDQLMIEQTLTFKGLYFVLMGRLSPLDGVGPKDIHIEKLITRATDGVVAEVVLATNFTN 120
           P DQLMIEQTLT+KG YFVLMGRLSPLDG+GPKDIH++KLI RA+DG+VAEVVLATNFTN
Sbjct: 88  PGDQLMIEQTLTYKGFYFVLMGRLSPLDGIGPKDIHLDKLILRASDGIVAEVVLATNFTN 147

Query: 121 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 171
           EGEATAHYISET+KARGL VSRLARGVPVGGELEYVDAGTIARAMLDRRTT
Sbjct: 148 EGEATAHYISETMKARGLSVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 198


>C3XBH7.1 C3XBH7_OXAFO Recombination protein recR
          Length = 198

 Score =  278 bits (711), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 128/171 (74%), Positives = 144/171 (84%)

Query: 1   MAYHLLQHDRDGALQLSRALAQAAETIRHCALCNTFTEQVICDTCQDGGRDTTTLCVVET 60
           MAYHLLQHDRDGA QLS ALA A  ++RHC  CNTFTE  +C+ C D  RD + LC+ ET
Sbjct: 28  MAYHLLQHDRDGAQQLSVALANAISSVRHCERCNTFTESEVCEMCSDQERDASLLCITET 87

Query: 61  PSDQLMIEQTLTFKGLYFVLMGRLSPLDGVGPKDIHIEKLITRATDGVVAEVVLATNFTN 120
           P+DQ+MIEQTLTFKG YFVLMG LSPLDG+GPK+IH +KLI RATDG+V EVVLAT+F N
Sbjct: 88  PADQMMIEQTLTFKGYYFVLMGSLSPLDGIGPKEIHFDKLIKRATDGIVKEVVLATSFNN 147

Query: 121 EGEATAHYISETLKARGLKVSRLARGVPVGGELEYVDAGTIARAMLDRRTT 171
           EGEATAHYISE LK RG++VSRLARGVPVG ELEYVD GTIARA LDRR+T
Sbjct: 148 EGEATAHYISEMLKVRGIRVSRLARGVPVGAELEYVDVGTIARAFLDRRST 198