BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0006.p         (257 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J220.1 D8J220_HERSS ABC-type transport system, permease compon...   463   e-128
A4VKJ8.1 A4VKJ8_PSEU5 Taurine ABC transporter, permease protein       405   e-111
F2N3J1.1 F2N3J1_PSEST Taurine ABC transporter, permease protein       405   e-111
E3HJ02.1 E3HJ02_ACHXA Binding-protein-dependent transport system...   401   e-110
Q7VXN8.1 Q7VXN8_BORPE Putative permease of ABC transporter            400   e-110

>D8J220.1 D8J220_HERSS ABC-type transport system, permease component protein
          Length = 257

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/257 (91%), Positives = 245/257 (95%)

Query: 1   MSSQRRVTGYRKKFAMVLAIAFILLMWQIAAWSLPDFLMPGVPTVLARLWNEVQTPAFRI 60
           MSSQRRVTG RKK AMVLAI FILLMWQIAAWSLP FLMPGVP+V ARLW EVQ+  FR+
Sbjct: 1   MSSQRRVTGIRKKLAMVLAIVFILLMWQIAAWSLPSFLMPGVPSVAARLWEEVQSSNFRL 60

Query: 61  ALWGSLTRLGGGYGAALLLGIGFGLIGAVLFFFREVLKSAIIILQSIPSIAWVPLFLILM 120
           AL+GSL RLG GYG+AL+LGIGFGL+GAVLFFFREVLKSAI+ILQSIPSIAWVPLFLILM
Sbjct: 61  ALFGSLYRLGMGYGSALVLGIGFGLVGAVLFFFREVLKSAIVILQSIPSIAWVPLFLILM 120

Query: 121 GFGNLPIIVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLGMLRRVYLPAVMPE 180
           GFGNLPI+VVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRL MLRRVYLPAVMPE
Sbjct: 121 GFGNLPIVVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLSMLRRVYLPAVMPE 180

Query: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRTLAYSGETADMVGVMTNILTIAILAALID 240
           LITGAQLAFGNAWRALISAEML+GFGKGLGRTLAYSGETADMVGVM NILTIAILAALID
Sbjct: 181 LITGAQLAFGNAWRALISAEMLVGFGKGLGRTLAYSGETADMVGVMANILTIAILAALID 240

Query: 241 QVILENLKHRLLRYQYV 257
           QVILENLKHRLL+YQYV
Sbjct: 241 QVILENLKHRLLKYQYV 257


>A4VKJ8.1 A4VKJ8_PSEU5 Taurine ABC transporter, permease protein
          Length = 257

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/257 (79%), Positives = 226/257 (87%)

Query: 1   MSSQRRVTGYRKKFAMVLAIAFILLMWQIAAWSLPDFLMPGVPTVLARLWNEVQTPAFRI 60
           MS  RR+TG +K  A+VLAI FILL+WQ AAWSLP FLMPG+PTV+ RL   +Q P FR 
Sbjct: 1   MSQARRLTGPKKYLAVVLAILFILLIWQAAAWSLPAFLMPGIPTVVERLITTIQQPEFRD 60

Query: 61  ALWGSLTRLGGGYGAALLLGIGFGLIGAVLFFFREVLKSAIIILQSIPSIAWVPLFLILM 120
            L+GS++RLG GYG ALL GIGFGL+G VLFFFRE+L+SAI+ILQSIPSIAWVPLFLI+M
Sbjct: 61  GLYGSMSRLGSGYGFALLFGIGFGLVGGVLFFFREILRSAIVILQSIPSIAWVPLFLIVM 120

Query: 121 GFGNLPIIVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLGMLRRVYLPAVMPE 180
           GFGNLPIIVVVA+AAFFP ALSVMNATESVQ VHVSAARVMGASR  +LRRVYLPAVMPE
Sbjct: 121 GFGNLPIIVVVALAAFFPMALSVMNATESVQPVHVSAARVMGASRWQLLRRVYLPAVMPE 180

Query: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRTLAYSGETADMVGVMTNILTIAILAALID 240
           LITGAQLAFGNAWRALISAEMLIGFG+GLGR+LAYSGE ADMVGVM NIL IAILA LID
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGQGLGRSLAYSGEIADMVGVMMNILVIAILATLID 240

Query: 241 QVILENLKHRLLRYQYV 257
           QV+LE  K R+LRYQYV
Sbjct: 241 QVVLEKFKQRMLRYQYV 257


>F2N3J1.1 F2N3J1_PSEST Taurine ABC transporter, permease protein
          Length = 257

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 205/257 (79%), Positives = 226/257 (87%)

Query: 1   MSSQRRVTGYRKKFAMVLAIAFILLMWQIAAWSLPDFLMPGVPTVLARLWNEVQTPAFRI 60
           MS  RR+TG +K  A+VLAI FILL+WQ AAWSLP FLMPG+PTV+ RL   +Q P FR 
Sbjct: 1   MSQARRLTGPKKYLAVVLAILFILLIWQAAAWSLPAFLMPGIPTVVERLITTIQQPEFRD 60

Query: 61  ALWGSLTRLGGGYGAALLLGIGFGLIGAVLFFFREVLKSAIIILQSIPSIAWVPLFLILM 120
            L+GS++RLG GYG ALL GIGFGL+G VLFFFRE+L+SAI+ILQSIPSIAWVPLFLI+M
Sbjct: 61  GLYGSMSRLGSGYGFALLFGIGFGLVGGVLFFFREILRSAIVILQSIPSIAWVPLFLIVM 120

Query: 121 GFGNLPIIVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLGMLRRVYLPAVMPE 180
           GFGNLPIIVVVA+AAFFP ALSVMNATESVQ VHVSAARVMGASR  +LRRVYLPAVMPE
Sbjct: 121 GFGNLPIIVVVALAAFFPMALSVMNATESVQPVHVSAARVMGASRWQLLRRVYLPAVMPE 180

Query: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRTLAYSGETADMVGVMTNILTIAILAALID 240
           LITGAQLAFGNAWRALISAEMLIGFG+GLGR+LAYSGE ADMVGVM NIL IAILA LID
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGQGLGRSLAYSGEIADMVGVMMNILVIAILATLID 240

Query: 241 QVILENLKHRLLRYQYV 257
           QV+LE  K R+LRYQYV
Sbjct: 241 QVVLEKFKQRMLRYQYV 257


>E3HJ02.1 E3HJ02_ACHXA Binding-protein-dependent transport system inner
           membrane component family protein 39
          Length = 257

 Score =  401 bits (1030), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/257 (78%), Positives = 228/257 (88%)

Query: 1   MSSQRRVTGYRKKFAMVLAIAFILLMWQIAAWSLPDFLMPGVPTVLARLWNEVQTPAFRI 60
           MS+  RVTG RK FA VL + FIL +WQ+AA++LPDFLMPGVP V+ RL+ ++   +F  
Sbjct: 1   MSASTRVTGARKHFAGVLGVLFILALWQLAAFALPDFLMPGVPAVVERLFEDLGKQSFHQ 60

Query: 61  ALWGSLTRLGGGYGAALLLGIGFGLIGAVLFFFREVLKSAIIILQSIPSIAWVPLFLILM 120
           +L G+L RLG GYG AL  GIGFGL+ AVLFFFREVL+SAI+ILQSIPSIAWVPLFLI+M
Sbjct: 61  SLLGTLGRLGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVM 120

Query: 121 GFGNLPIIVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLGMLRRVYLPAVMPE 180
           GFGN PIIVVVA++AFFPAALSVMNATESVQ+VHVSAARVMGA+R G+++RVYLPAVMPE
Sbjct: 121 GFGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLVKRVYLPAVMPE 180

Query: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRTLAYSGETADMVGVMTNILTIAILAALID 240
           LITGAQLAFGNAWRALISAEMLIGFGKGLGR+LAYSGE ADM GVMTNIL IA+LAALID
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALID 240

Query: 241 QVILENLKHRLLRYQYV 257
           Q +LENLKHRLLRYQYV
Sbjct: 241 QFVLENLKHRLLRYQYV 257


>Q7VXN8.1 Q7VXN8_BORPE Putative permease of ABC transporter
          Length = 257

 Score =  400 bits (1029), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/257 (78%), Positives = 224/257 (87%)

Query: 1   MSSQRRVTGYRKKFAMVLAIAFILLMWQIAAWSLPDFLMPGVPTVLARLWNEVQTPAFRI 60
           MSS  RVTG RK  A VL + FIL +WQ AAW LPDFLMPGVPTV  RL  ++   +F  
Sbjct: 1   MSSSTRVTGARKHLAGVLGVLFILALWQAAAWVLPDFLMPGVPTVAQRLVEDLGQASFHQ 60

Query: 61  ALWGSLTRLGGGYGAALLLGIGFGLIGAVLFFFREVLKSAIIILQSIPSIAWVPLFLILM 120
           +L G+L RLG GYG AL  GIGFGL+ AVLFFFREVL+SAI+ILQSIPSIAWVPLFLI+M
Sbjct: 61  SLLGTLGRLGAGYGLALAAGIGFGLVAAVLFFFREVLRSAIVILQSIPSIAWVPLFLIVM 120

Query: 121 GFGNLPIIVVVAIAAFFPAALSVMNATESVQQVHVSAARVMGASRLGMLRRVYLPAVMPE 180
           GFGN PIIVVVA++AFFPAALSVMNATESVQ+VHVSAARVMGA+R G+++RVYLPAVMPE
Sbjct: 121 GFGNTPIIVVVALSAFFPAALSVMNATESVQRVHVSAARVMGATRWGLIKRVYLPAVMPE 180

Query: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRTLAYSGETADMVGVMTNILTIAILAALID 240
           LITGAQLAFGNAWRALISAEMLIGFGKGLGR+LAYSGE ADM GVMTNIL IA+LAALID
Sbjct: 181 LITGAQLAFGNAWRALISAEMLIGFGKGLGRSLAYSGEIADMTGVMTNILVIAVLAALID 240

Query: 241 QVILENLKHRLLRYQYV 257
           Q +LENLKHRLLRYQYV
Sbjct: 241 QFVLENLKHRLLRYQYV 257