BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0063.p         (128 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J1Q1.1 D8J1Q1_HERSS LacI family transcription regulator protein     168   3e-40
A2SEE1.1 A2SEE1_METPP Transcriptional regulator, LacI family          160   8e-38
Q127G5.1 Q127G5_POLSJ Transcriptional regulator, LacI family          159   1e-37
A1VLB9.1 A1VLB9_POLNA Transcriptional regulator, LacI family          149   1e-34
Q12GE2.1 Q12GE2_POLSJ Transcriptional regulator, LacI family          137   7e-31

>D8J1Q1.1 D8J1Q1_HERSS LacI family transcription regulator protein
          Length = 365

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 98/123 (79%)

Query: 5   GRTEVPQCMVPAPTTLGSGRTGLADLLGQDGAIDGVFCSSDILAMGVMIEAQVRGIAIPS 64
           GR  +P   V APTTLG GR GLA+LL     +D +FCSSD+LA+GVMIEAQ RGIAIP 
Sbjct: 242 GRAPLPMHHVTAPTTLGQGRQGLAELLQAQPDLDAIFCSSDLLALGVMIEAQSRGIAIPE 301

Query: 65  QLALMGFGDLSFSRDLHPQLTTVRIDGTGIGKAAARFIIERAEGREVPERVHDIGFTIIE 124
           QLA++GFGDL FSRDL P+LTTVRIDGTGIG+ AARFII+RA G EV ERV D+GF+II 
Sbjct: 302 QLAVVGFGDLEFSRDLQPRLTTVRIDGTGIGQRAARFIIDRAAGIEVAERVVDVGFSIIA 361

Query: 125 RQS 127
           R S
Sbjct: 362 RDS 364


>A2SEE1.1 A2SEE1_METPP Transcriptional regulator, LacI family
          Length = 347

 Score =  160 bits (404), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 76/120 (63%), Positives = 97/120 (80%)

Query: 8   EVPQCMVPAPTTLGSGRTGLADLLGQDGAIDGVFCSSDILAMGVMIEAQVRGIAIPSQLA 67
           E+P   VPAPTTLGSGR+GLA LL +   +D VFCSSD+LA+GV++EA  RGIA+P QLA
Sbjct: 227 EIPALRVPAPTTLGSGRSGLARLLAERPEVDAVFCSSDMLALGVLVEAAARGIAVPQQLA 286

Query: 68  LMGFGDLSFSRDLHPQLTTVRIDGTGIGKAAARFIIERAEGREVPERVHDIGFTIIERQS 127
           ++GFGDL F+ D  P L+TVRIDGTGIG+ AARFI++RA+GR V E++ D+GF +IER S
Sbjct: 287 VVGFGDLGFAADTQPALSTVRIDGTGIGQRAARFIVDRADGRTVGEKIVDVGFRVIERGS 346


>Q127G5.1 Q127G5_POLSJ Transcriptional regulator, LacI family
          Length = 347

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/123 (65%), Positives = 96/123 (78%)

Query: 5   GRTEVPQCMVPAPTTLGSGRTGLADLLGQDGAIDGVFCSSDILAMGVMIEAQVRGIAIPS 64
           G  EV    VPAPTT  SGR+ LA+L+   G ID VFCSSD+LA+GV+++AQ  GIA+P 
Sbjct: 224 GLPEVRMVTVPAPTTAKSGRSALAELMRDAGDIDAVFCSSDLLALGVLMQAQASGIAVPG 283

Query: 65  QLALMGFGDLSFSRDLHPQLTTVRIDGTGIGKAAARFIIERAEGREVPERVHDIGFTIIE 124
           QLA++GFGDL F+ DL+P LTTVRIDGT IG+ AARFI+ERAEGR V  RV DIGFTI+E
Sbjct: 284 QLAIVGFGDLEFAADLNPALTTVRIDGTAIGRQAARFIVERAEGRPVEPRVVDIGFTIVE 343

Query: 125 RQS 127
           R S
Sbjct: 344 RGS 346


>A1VLB9.1 A1VLB9_POLNA Transcriptional regulator, LacI family
          Length = 332

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 89/118 (75%)

Query: 10  PQCMVPAPTTLGSGRTGLADLLGQDGAIDGVFCSSDILAMGVMIEAQVRGIAIPSQLALM 69
           P  +VPAPTTLGSGR GLA +L      D VFCSSD+LA+GV+IEAQ RG+A+P QL ++
Sbjct: 214 PTHLVPAPTTLGSGRAGLAAVLAAHPHTDAVFCSSDMLALGVLIEAQARGLAVPRQLGVV 273

Query: 70  GFGDLSFSRDLHPQLTTVRIDGTGIGKAAARFIIERAEGREVPERVHDIGFTIIERQS 127
           G GDL  +  L P LTTVRIDGT IG+ AA++I+ERAEGR V E + DIGF IIER S
Sbjct: 274 GLGDLDLAASLQPALTTVRIDGTRIGRTAAQYIVERAEGRSVSEPIVDIGFEIIERAS 331


>Q12GE2.1 Q12GE2_POLSJ Transcriptional regulator, LacI family
          Length = 343

 Score =  137 bits (344), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/120 (54%), Positives = 83/120 (69%)

Query: 8   EVPQCMVPAPTTLGSGRTGLADLLGQDGAIDGVFCSSDILAMGVMIEAQVRGIAIPSQLA 67
           EVP  +VPAP+ L  GR  LA+LL QD  ++ V+CSSD LA GV++EAQ RG+ +P  LA
Sbjct: 216 EVPTAVVPAPSNLALGRRALAELLQQDPKLEAVYCSSDQLAQGVLVEAQARGLRVPEDLA 275

Query: 68  LMGFGDLSFSRDLHPQLTTVRIDGTGIGKAAARFIIERAEGREVPERVHDIGFTIIERQS 127
           + GFGD  F+  L P LTTV +DG  IG+ AAR I+ R  G  + ERV D+GF I+ERQS
Sbjct: 276 VCGFGDADFAAHLQPSLTTVHVDGAAIGRLAARLIVARCRGEPIAERVIDVGFRIVERQS 335