BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0056.p (305 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IQ87.1 D8IQ87_HERSS ABC-type amino acid transport/signal trans... 389 e-106 Q476A5.1 Q476A5_CUPPJ Extracellular solute-binding protein, fami... 308 8e-82 Q1LRJ8.1 Q1LRJ8_RALME Glutamate and aspartate transporter subuni... 306 3e-81 B2JRT0.1 B2JRT0_BURP8 Extracellular solute-binding protein family 3 303 3e-80 B5WSC8.1 B5WSC8_9BURK Extracellular solute-binding protein family 3 300 2e-79 >D8IQ87.1 D8IQ87_HERSS ABC-type amino acid transport/signal transduction system, periplasmic component protein Length = 305 Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust. Identities = 187/223 (83%), Positives = 200/223 (89%), Gaps = 5/223 (2%) Query: 8 LLALLSTLACASAVHAADAGLGPTLQKIKDGNVIAIGHRTSSIPFSYYDENQKVVGYSQD 67 +LA+L ACA AD+ LGPTLQKIKD N+IAIGHRTSSIPFSYYDENQ+V+GYSQD Sbjct: 17 MLAVLPQQACA-----ADSALGPTLQKIKDANLIAIGHRTSSIPFSYYDENQQVIGYSQD 71 Query: 68 LCNKAIDAVKAKLNLPNLEVRMIPVTSQNRTPLLQNGTIDLECGVTSNLKDRWQQVSFNT 127 LCNK IDAVK K+ LEVRM+PVTSQNRTPLLQNGTIDLECGVTSNLK RWQQVSF T Sbjct: 72 LCNKVIDAVKTKIGAAKLEVRMVPVTSQNRTPLLQNGTIDLECGVTSNLKSRWQQVSFAT 131 Query: 128 TFFVASSRILTRKDSGIKDFPDLAGKAVVTNAGTTSERLLRTLNERRKMNMQIQSAKDYG 187 FFVASSRILT++DSGIKDFPDLAGKAVVTNAGTTSE+LLR LNE RKM MQIQSAKDYG Sbjct: 132 NFFVASSRILTKRDSGIKDFPDLAGKAVVTNAGTTSEQLLRNLNEHRKMGMQIQSAKDYG 191 Query: 188 EAFLILQSGRVAAYVMDDILLAGARTTAQKPNDWLLTGTPFGA 230 EAFLILQSGRVAAYVMDD+LLAGARTTAQKPNDW+LTG PFGA Sbjct: 192 EAFLILQSGRVAAYVMDDVLLAGARTTAQKPNDWVLTGNPFGA 234 >Q476A5.1 Q476A5_CUPPJ Extracellular solute-binding protein, family 3 Length = 302 Score = 308 bits (788), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 144/219 (65%), Positives = 178/219 (81%), Gaps = 1/219 (0%) Query: 9 LALLSTLACASAVHAADAGLGPTLQKIKDGNVIAIGHRTSSIPFSYYDENQKVVGYSQDL 68 LAL ++L A HA D PTL KIK I+IGHRTSSIPFSYYD NQKV+G+SQDL Sbjct: 11 LALAASLPAGLA-HAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDSNQKVIGFSQDL 69 Query: 69 CNKAIDAVKAKLNLPNLEVRMIPVTSQNRTPLLQNGTIDLECGVTSNLKDRWQQVSFNTT 128 C++ ++ VK + N PNL+VRM+PVTSQNR L+QNGT+DLECGVT+NLK R QQV+F+TT Sbjct: 70 CDRVVNEVKKQTNQPNLQVRMVPVTSQNRISLVQNGTVDLECGVTTNLKSRQQQVAFSTT 129 Query: 129 FFVASSRILTRKDSGIKDFPDLAGKAVVTNAGTTSERLLRTLNERRKMNMQIQSAKDYGE 188 FFVA +R+L +K S + DF DL+GKAVVTNAGTTSER+LR LN+ +K N+ IQSAKDYGE Sbjct: 130 FFVAGTRLLVKKGSPVHDFSDLSGKAVVTNAGTTSERILRRLNDEKKANITIQSAKDYGE 189 Query: 189 AFLILQSGRVAAYVMDDILLAGARTTAQKPNDWLLTGTP 227 +FLILQSGRVAA++MDD+LL+GART A P +W++ GTP Sbjct: 190 SFLILQSGRVAAFMMDDVLLSGARTLAPNPAEWVVVGTP 228 >Q1LRJ8.1 Q1LRJ8_RALME Glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily Length = 302 Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/228 (63%), Positives = 180/228 (78%), Gaps = 1/228 (0%) Query: 1 MKRFTHPLLALLSTLAC-ASAVHAADAGLGPTLQKIKDGNVIAIGHRTSSIPFSYYDENQ 59 M +F A+L ++ A + A D PTL KIK I+IGHRTSSIPFSYYD NQ Sbjct: 1 MNQFFMTRAAVLMAVSLGAGSALAVDVAASPTLSKIKSSGTISIGHRTSSIPFSYYDANQ 60 Query: 60 KVVGYSQDLCNKAIDAVKAKLNLPNLEVRMIPVTSQNRTPLLQNGTIDLECGVTSNLKDR 119 KV+G+SQD+C++ IDAVK + PNL+VRM+PVTSQNR L+QNGT+DLECGVT+NLK R Sbjct: 61 KVIGFSQDICDRVIDAVKKETGTPNLQVRMVPVTSQNRQSLVQNGTVDLECGVTTNLKSR 120 Query: 120 WQQVSFNTTFFVASSRILTRKDSGIKDFPDLAGKAVVTNAGTTSERLLRTLNERRKMNMQ 179 QQV+F+TTFFVA +R+L +K S + DF DL+GKAVVTNAGTTSER+LR LN+ + N+ Sbjct: 121 QQQVAFSTTFFVAGTRLLVKKGSPVHDFGDLSGKAVVTNAGTTSERILRKLNDEKGANIT 180 Query: 180 IQSAKDYGEAFLILQSGRVAAYVMDDILLAGARTTAQKPNDWLLTGTP 227 IQSAKDYGE+FLILQSGRVAA++MDD+LL+G+RT A PNDW++ GTP Sbjct: 181 IQSAKDYGESFLILQSGRVAAFMMDDVLLSGSRTLAPNPNDWVVVGTP 228 >B2JRT0.1 B2JRT0_BURP8 Extracellular solute-binding protein family 3 Length = 302 Score = 303 bits (775), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 145/228 (63%), Positives = 173/228 (75%), Gaps = 1/228 (0%) Query: 1 MKRFTHPLLALLSTLACASAVHAADA-GLGPTLQKIKDGNVIAIGHRTSSIPFSYYDENQ 59 M R T LAL C + A A PTL KI+ N+IAIGHR +S+PFSY D N Sbjct: 1 MNRLTSLALALCVAAPCLTTTTGAAAQETQPTLAKIEAANLIAIGHRETSVPFSYVDSNN 60 Query: 60 KVVGYSQDLCNKAIDAVKAKLNLPNLEVRMIPVTSQNRTPLLQNGTIDLECGVTSNLKDR 119 +V+G+SQDLCN+ IDAVK K + PNL+VR IPVTSQNR L+QNGT+DLECGVT+NL R Sbjct: 61 QVIGFSQDLCNRIIDAVKVKTHKPNLQVRFIPVTSQNRISLVQNGTVDLECGVTTNLTSR 120 Query: 120 WQQVSFNTTFFVASSRILTRKDSGIKDFPDLAGKAVVTNAGTTSERLLRTLNERRKMNMQ 179 QV+F TFFVA++R+LTRKDSGIKDFPDLAGK VVTN GTTSER+LR +NE +KMNMQ Sbjct: 121 QNQVAFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEEKKMNMQ 180 Query: 180 IQSAKDYGEAFLILQSGRVAAYVMDDILLAGARTTAQKPNDWLLTGTP 227 I SAKDYGE + L++GR AAY+MDD+LLAG RT KP DW++ GTP Sbjct: 181 IISAKDYGEGRMTLETGRAAAYMMDDVLLAGTRTLTAKPADWVIVGTP 228 >B5WSC8.1 B5WSC8_9BURK Extracellular solute-binding protein family 3 Length = 300 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 147/228 (64%), Positives = 173/228 (75%), Gaps = 3/228 (1%) Query: 1 MKRFTHPLLALLSTLACAS-AVHAADAGLGPTLQKIKDGNVIAIGHRTSSIPFSYYDENQ 59 MK +A+L AS A DA TL KI+ VIAIGHR +S+PFSY D N Sbjct: 1 MKVMNWSTVAVLVAATSASPGAFAQDAT--STLAKIQQSGVIAIGHRETSVPFSYVDSNN 58 Query: 60 KVVGYSQDLCNKAIDAVKAKLNLPNLEVRMIPVTSQNRTPLLQNGTIDLECGVTSNLKDR 119 +V+G+SQDLCNK IDAVK K P+L+VR IPVTSQNR PL+QNGT+DLECGVT+NL R Sbjct: 59 QVIGFSQDLCNKVIDAVKVKTKRPDLKVRFIPVTSQNRIPLVQNGTVDLECGVTTNLAAR 118 Query: 120 WQQVSFNTTFFVASSRILTRKDSGIKDFPDLAGKAVVTNAGTTSERLLRTLNERRKMNMQ 179 QV+F TFFVA++R+LTRKDSGIKDFPDLAGK VVTN GTTSER+LR +NE +KMNMQ Sbjct: 119 QSQVTFGDTFFVATTRLLTRKDSGIKDFPDLAGKTVVTNQGTTSERILRKMNEDKKMNMQ 178 Query: 180 IQSAKDYGEAFLILQSGRVAAYVMDDILLAGARTTAQKPNDWLLTGTP 227 I SAKDYGE L L+SGR AY+MDD+LLAG RT KP+DW++TGTP Sbjct: 179 IISAKDYGEGRLTLESGRAVAYMMDDVLLAGTRTLTAKPSDWIITGTP 226