BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0049.p         (102 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6T1D6.1 A6T1D6_JANMA Uncharacterized conserved protein                70   1e-10

>A6T1D6.1 A6T1D6_JANMA Uncharacterized conserved protein
          Length = 115

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/105 (45%), Positives = 58/105 (55%), Gaps = 20/105 (19%)

Query: 11  FLATLALTYSAWVALSLAMDRHYADINGXTAA--------------------FAVCVRDS 50
           F+A LAL+Y  W ALSL MDRHYADI+G                        +A+ ++  
Sbjct: 4   FIAALALSYGGWTALSLGMDRHYADIHGRGKEPQQRERNLYRMLGTLALLVTYAISIQLQ 63

Query: 51  GWGIGPVAWLGTMTVAALLLVLQLCYAPKSVPRTGKPALWLALLL 95
           GW +G V  LGTMTV ALLLVL L YAP+     GK A  LA+LL
Sbjct: 64  GWTVGSVLCLGTMTVGALLLVLLLTYAPQRTVLMGKVATGLAVLL 108