BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0043.p (327 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value F1W1S9.1 F1W1S9_9BURK Oligopeptide transport ATP-binding protein... 374 e-102 C0ZB25.1 C0ZB25_BREBN ABC transporter ATP-binding protein 369 e-100 D7D382.1 D7D382_GEOSC Oligopeptide/dipeptide ABC transporter, AT... 363 2e-98 E0RJ66.1 E0RJ66_PAEP6 Oligopeptide transport ATP-binding protein... 360 1e-97 B4BRS1.1 B4BRS1_9BACI Oligopeptide/dipeptide ABC transporter, AT... 357 1e-96 >F1W1S9.1 F1W1S9_9BURK Oligopeptide transport ATP-binding protein oppD Length = 228 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/232 (79%), Positives = 197/232 (84%), Gaps = 4/232 (1%) Query: 96 MIFQEPMTSLNPLHRIGHQLREMLKVHGNLSRKDIDAQVIAMLQRVGLPRAEQLVDDYPH 155 MIFQEPMTSLNPLHRIG QL EML++H L RK I Q IAML+RVGLPRAEQL+DDYPH Sbjct: 1 MIFQEPMTSLNPLHRIGDQLGEMLRMHTTLDRKQITEQSIAMLKRVGLPRAEQLIDDYPH 60 Query: 156 SLSGGMRQRVMIAMALLCNPGLLICDEPTTALDVTIQAQILDLMRALKREHGTAILMITH 215 SLSGGMRQRVMIAMALLC+PG+LICDEPTTALDVTIQAQILDLMR LK + GTAILMITH Sbjct: 61 SLSGGMRQRVMIAMALLCHPGVLICDEPTTALDVTIQAQILDLMRDLKEQQGTAILMITH 120 Query: 216 DLGVVAEMCDRVVVMYAGQVVEQSSVRDLFDAPAHPYTQALMRARPALDAVPGEPLEAIP 275 DLGVVAEMC+RVVVMYAGQVVE+SSVRDLFDAPAHPYT ALM+ARP L A PG+PL AIP Sbjct: 121 DLGVVAEMCERVVVMYAGQVVEESSVRDLFDAPAHPYTTALMQARPTLAATPGQPLRAIP 180 Query: 276 GAVPLPGSVESGCRFAARCPKVQERCRRDAPTLDAVDDRAGDGHLARCWYPN 327 G VP PGSV+SGCRFAARCPK +CR P L V GHLARCWYP Sbjct: 181 GMVPPPGSVDSGCRFAARCPKADTQCRAQMPDLIEV----AAGHLARCWYPG 228 >C0ZB25.1 C0ZB25_BREBN ABC transporter ATP-binding protein Length = 322 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/324 (55%), Positives = 233/324 (71%), Gaps = 9/324 (2%) Query: 1 MLEVNNLKVEFVRNGKRVAPVDGVSFSVGANETVGLLGESGCGKSVTALSILRLFPMASK 60 +L++ NL+ F + ++ VDGV+ +V E VG++GESGCGKSVT+LS+++L P Sbjct: 5 VLQIENLQTHFFTDRGQIPAVDGVTITVQKGEVVGIVGESGCGKSVTSLSVMKLVPNPPG 64 Query: 61 AQLSGSVQYNDGVRVSNMLEADDATLRSMRGKEIAMIFQEPMTSLNPLHRIGHQLREMLK 120 + GS+++ + +++ D+ +R +RG EIAMIFQEPMTSLNP+ IG Q+ E ++ Sbjct: 65 RIVGGSIKF----KGEDLVSVDEKRMRDIRGNEIAMIFQEPMTSLNPVFTIGDQIGESVR 120 Query: 121 VHGNLSRKDIDAQVIAMLQRVGLPRAEQLVDDYPHSLSGGMRQRVMIAMALLCNPGLLIC 180 +H S+KD A+ I ML++VG+PRA+ +VD+YPH LSGGMRQRVMIAMA+ CNP LLI Sbjct: 121 LHTKASKKDARARAIEMLKKVGIPRADAIVDEYPHQLSGGMRQRVMIAMAMACNPALLIA 180 Query: 181 DEPTTALDVTIQAQILDLMRALKREHGTAILMITHDLGVVAEMCDRVVVMYAGQVVEQSS 240 DEPTTALDVTIQAQILDLMR L RE T+IL+ITHDLGVVAEMC RVVVMYAG V+EQ Sbjct: 181 DEPTTALDVTIQAQILDLMRQLNREADTSILLITHDLGVVAEMCHRVVVMYAGNVIEQGD 240 Query: 241 VRDLFDAPAHPYTQALMRARPALDAVPGEPLEAIPGAVPLPGSVESGCRFAARCPKVQER 300 VR + P HPYT L+ + P L+ E L +IPG VP+PGS+ GCRFA RC KV +R Sbjct: 241 VRTILKNPKHPYTIGLLNSLPKLEG-SQERLYSIPGNVPIPGSLTVGCRFAPRCDKVSDR 299 Query: 301 CRRDAPTLDAVDDRAGDGHLARCW 324 CR + P L V GD HL+RCW Sbjct: 300 CRSEMPELKVV----GDNHLSRCW 319 >D7D382.1 D7D382_GEOSC Oligopeptide/dipeptide ABC transporter, ATPase subunit Length = 341 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/324 (54%), Positives = 231/324 (71%), Gaps = 8/324 (2%) Query: 1 MLEVNNLKVEFVRNGKRVAPVDGVSFSVGANETVGLLGESGCGKSVTALSILRLFPMASK 60 +LEV L+ F + + VDGV FS+ E +G++GESGCGKSVT+LSI+ L P Sbjct: 6 LLEVRGLRTSFFTDDGEIPAVDGVDFSIREGEVLGIVGESGCGKSVTSLSIMGLLPKGIG 65 Query: 61 AQLSGSVQYNDGVRVSNMLEADDATLRSMRGKEIAMIFQEPMTSLNPLHRIGHQLREMLK 120 + G + + N++EA + ++ +RG EIAMIFQEPMTSLNPL IG+QL E ++ Sbjct: 66 KVVGGEIWFKG----ENLIEASERRMKQIRGNEIAMIFQEPMTSLNPLFTIGNQLVEAIR 121 Query: 121 VHGNLSRKDIDAQVIAMLQRVGLPRAEQLVDDYPHSLSGGMRQRVMIAMALLCNPGLLIC 180 +H + +K+ A+ + ML+ VGLPRAEQ++D+YPH LSGGMRQRVMIAMA++C P LLI Sbjct: 122 LHTKIGKKEARARAVEMLKLVGLPRAEQMLDEYPHQLSGGMRQRVMIAMAMVCRPALLIA 181 Query: 181 DEPTTALDVTIQAQILDLMRALKREHGTAILMITHDLGVVAEMCDRVVVMYAGQVVEQSS 240 DEPTTALDVTIQAQIL LM+ L + GTA++MITHDLGVVAE+CDRV+VMYAGQ+VE+ S Sbjct: 182 DEPTTALDVTIQAQILALMKELNQTFGTAVMMITHDLGVVAELCDRVIVMYAGQIVEEGS 241 Query: 241 VRDLFDAPAHPYTQALMRARPALDAVPGEPLEAIPGAVPLPGSVESGCRFAARCPKVQER 300 VRD+F P HPYT L+R+ P + E L +IPG VP PG+V GCRFAARC V +R Sbjct: 242 VRDIFRNPKHPYTAGLIRSIPDIRG-KKERLYSIPGQVPKPGTVRCGCRFAARCEWVVDR 300 Query: 301 CRRDAPTLDAVDDRAGDGHLARCW 324 CR + P L ++ GH ARC+ Sbjct: 301 CRHEDPLLYETSEQ---GHRARCF 321 >E0RJ66.1 E0RJ66_PAEP6 Oligopeptide transport ATP-binding protein appD Length = 338 Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 179/324 (55%), Positives = 229/324 (70%), Gaps = 9/324 (2%) Query: 1 MLEVNNLKVEFVRNGKRVAPVDGVSFSVGANETVGLLGESGCGKSVTALSILRLFPMASK 60 +LEV NL+ EF + VDGV SVG ET+G++GESGCGKS+T+LSI++L P Sbjct: 13 LLEVTNLRTEFKTAAGTIRAVDGVDLSVGKGETLGIVGESGCGKSITSLSIMQLLPKGLG 72 Query: 61 AQLSGSVQYNDGVRVSNMLEADDATLRSMRGKEIAMIFQEPMTSLNPLHRIGHQLREMLK 120 +G V++N N+L+ + +RS+RG E+AMIFQEPMTSLNP+ +IG Q+ E + Sbjct: 73 KIAAGEVRFNG----ENILDFSERKMRSIRGNEMAMIFQEPMTSLNPVFKIGKQIAESAR 128 Query: 121 VHGNLSRKDIDAQVIAMLQRVGLPRAEQLVDDYPHSLSGGMRQRVMIAMALLCNPGLLIC 180 H +S+ + ML +VG+PR E++V YPH LSGGMRQRVMIAMA++CNP LLI Sbjct: 129 YHHGVSKHKAKDMAVEMLTKVGIPRPEKVVGSYPHELSGGMRQRVMIAMAMICNPKLLIA 188 Query: 181 DEPTTALDVTIQAQILDLMRALKREHGTAILMITHDLGVVAEMCDRVVVMYAGQVVEQSS 240 DEPTTALDVTIQAQILDLMR L++ GT+ILMITHDLGVVAEMCDRVV+MYAGQVVE++ Sbjct: 189 DEPTTALDVTIQAQILDLMRELQKSEGTSILMITHDLGVVAEMCDRVVIMYAGQVVEETD 248 Query: 241 VRDLFDAPAHPYTQALMRARPALDAVPGEPLEAIPGAVPLPGSVESGCRFAARCPKVQER 300 V+ LF P HPYTQ+L+ + P L++ E L +IPG VP P + GCRFA RC +E Sbjct: 249 VKTLFKDPKHPYTQSLLASLPQLNS-DQERLASIPGQVPNPLDMPKGCRFAPRCQFAKEI 307 Query: 301 CRRDAPTLDAVDDRAGDGHLARCW 324 CR +AP L V+ GH +RC Sbjct: 308 CRAEAPELTEVE----PGHKSRCL 327 >B4BRS1.1 B4BRS1_9BACI Oligopeptide/dipeptide ABC transporter, ATPase subunit Length = 332 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 171/326 (52%), Positives = 228/326 (69%), Gaps = 9/326 (2%) Query: 1 MLEVNNLKVEFVRNGKRVAPVDGVSFSVGANETVGLLGESGCGKSVTALSILRLFPMASK 60 +L++ NL+ F +G + VDGV+ ++ ETVG++GESG GKSVT+LS++RL Sbjct: 5 ILDIQNLQTSFFSDGIEIKAVDGVNITIYKGETVGVVGESGSGKSVTSLSVMRLLKDTPG 64 Query: 61 AQLSGSVQYNDGVRVSNMLEADDATLRSMRGKEIAMIFQEPMTSLNPLHRIGHQLREMLK 120 + G++ + N+LE + +RS+RG EIAMIFQEPMTSLNP+++IG QL E ++ Sbjct: 65 RVVGGTILFEG----KNLLELSEREMRSIRGNEIAMIFQEPMTSLNPVYKIGKQLEESIR 120 Query: 121 VHGNLSRKDIDAQVIAMLQRVGLPRAEQLVDDYPHSLSGGMRQRVMIAMALLCNPGLLIC 180 +H ++ + ML+ VGLPRAE+++++YP LSGGMRQRVMIAMA+ C P LLI Sbjct: 121 LHLGYDKRQAREHAVNMLKLVGLPRAEEIINEYPFQLSGGMRQRVMIAMAMACRPKLLIA 180 Query: 181 DEPTTALDVTIQAQILDLMRALKREHGTAILMITHDLGVVAEMCDRVVVMYAGQVVEQSS 240 DEPTTALDVTIQAQILDLMR LK GT+I++ITHDLGVVAEMCDRVVVMYAG+VVE++ Sbjct: 181 DEPTTALDVTIQAQILDLMRKLKEASGTSIMLITHDLGVVAEMCDRVVVMYAGRVVEEAD 240 Query: 241 VRDLFDAPAHPYTQALMRARPALDAVPGEPLEAIPGAVPLPGSVESGCRFAARCPKVQER 300 V LF+ P HPYTQ L+ + P L E LE+IPG VP P + GC+FA RC +R Sbjct: 241 VHTLFEKPMHPYTQGLLNSIPKLGK-KVEKLESIPGNVPTPNEMPKGCKFANRCKLSTKR 299 Query: 301 CRRDAPTLDAVDDRAGDGHLARCWYP 326 C + P+L+ +D + H RCW+P Sbjct: 300 CWEEEPSLEKLD----ENHTVRCWFP 321