BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0036.p         (47 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E6V082.1 E6V082_VARPD Threonine dehydratase                            86   2e-15
C5CX08.1 C5CX08_VARPS Threonine dehydratase                            84   6e-15
A1VIF8.1 A1VIF8_POLNA L-threonine ammonia-lyase EC=4.3.1.19            84   7e-15
D8ITU1.1 D8ITU1_HERSS Threonine dehydratase protein EC=4.3.1.19        82   2e-14
A1TIG6.1 A1TIG6_ACIAC L-threonine ammonia-lyase EC=4.3.1.19            72   4e-11

>E6V082.1 E6V082_VARPD Threonine dehydratase
          Length = 402

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 43/47 (91%)

Query: 1   VHHQRAFTMLAAQNVDIELVLQTRGREHLALVLNALRQAGFEAEEQH 47
           VHHQRAFTMLAAQNVDIELVLQTRGR HLA VL AL+ AGFEAEEQH
Sbjct: 356 VHHQRAFTMLAAQNVDIELVLQTRGRAHLASVLTALKDAGFEAEEQH 402


>C5CX08.1 C5CX08_VARPS Threonine dehydratase
          Length = 409

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/47 (89%), Positives = 42/47 (89%)

Query: 1   VHHQRAFTMLAAQNVDIELVLQTRGREHLALVLNALRQAGFEAEEQH 47
           VHHQRAFTMLAAQNVDIELVLQTRGR HLA VL AL  AGFEAEEQH
Sbjct: 363 VHHQRAFTMLAAQNVDIELVLQTRGRAHLASVLGALHDAGFEAEEQH 409


>A1VIF8.1 A1VIF8_POLNA L-threonine ammonia-lyase EC=4.3.1.19
          Length = 400

 Score = 84.0 bits (206), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 43/47 (91%)

Query: 1   VHHQRAFTMLAAQNVDIELVLQTRGREHLALVLNALRQAGFEAEEQH 47
           VHHQRAFTMLAAQNV+IELVLQTRGR H+A VL ALR AGFEAEEQH
Sbjct: 354 VHHQRAFTMLAAQNVEIELVLQTRGRPHIAQVLQALRTAGFEAEEQH 400


>D8ITU1.1 D8ITU1_HERSS Threonine dehydratase protein EC=4.3.1.19
          Length = 401

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 42/47 (89%)

Query: 1   VHHQRAFTMLAAQNVDIELVLQTRGREHLALVLNALRQAGFEAEEQH 47
           VHHQRAFT+LAAQNVDIELVLQTRGR HLA VL ALR AGFEAEE H
Sbjct: 355 VHHQRAFTLLAAQNVDIELVLQTRGRPHLAQVLQALRAAGFEAEELH 401


>A1TIG6.1 A1TIG6_ACIAC L-threonine ammonia-lyase EC=4.3.1.19
          Length = 402

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query: 1   VHHQRAFTMLAAQNVDIELVLQTRGREHLALVLNALRQAGFEAE 44
           VHHQRAFTMLAAQNV+IELVLQTRGREH+  VL  LRQA  EAE
Sbjct: 357 VHHQRAFTMLAAQNVEIELVLQTRGREHVQQVLACLRQASMEAE 400