BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0029.p (315 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IX00.1 D8IX00_HERSS Ornithine cyclodeaminase protein EC=4.3.1.12 447 e-123 Q13XQ6.1 Q13XQ6_BURXL Ornithine cyclodeaminase EC=4.3.1.12 256 4e-66 D5NCM7.1 D5NCM7_9BURK Ornithine cyclodeaminase/mu-crystallin 255 6e-66 Q46UR5.1 Q46UR5_CUPPJ Ornithine cyclodeaminase EC=4.3.1.12 251 1e-64 B3RBA0.1 B3RBA0_CUPTR Ornithine cyclodeaminase/mu-crystallin, si... 250 2e-64 >D8IX00.1 D8IX00_HERSS Ornithine cyclodeaminase protein EC=4.3.1.12 Length = 306 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/315 (77%), Positives = 266/315 (84%), Gaps = 9/315 (2%) Query: 1 VKLITNQQVSELVTTADAVQAMREAFAARVRTSASNGVAQQARVRTSASNGVMLSMMGAV 60 +K ++NQQ+SEL+TT DA+ AMREA + + A Q RVRTSASNGVMLSMMGAV Sbjct: 1 MKFLSNQQISELLTTEDAIAAMREA------FAGAAEGAHQGRVRTSASNGVMLSMMGAV 54 Query: 61 IPDAGIAGAKVYTTIKGAFKFVITLFSTETGAPLATIEGDTMTGLRTAAATAVACDALAR 120 IP AGIAGAKVYTTIKG F+FVI LFSTETGAPL T+EGD MTGLRTAAATAVACDALAR Sbjct: 55 IPAAGIAGAKVYTTIKGQFRFVIQLFSTETGAPLCTMEGDAMTGLRTAAATAVACDALAR 114 Query: 121 KDVETLAVIGTGVQARSHIPALLQVRKFKEILIAGLSGQQELADEVTKTYGVPARVVEID 180 D LAVIGTGVQARSHIPALLQVR FKE+LIAG SGQQ LA+EVT+T GVPAR+V ID Sbjct: 115 PDAGVLAVIGTGVQARSHIPALLQVRPFKEVLIAGRSGQQALAEEVTRTLGVPARMVSID 174 Query: 181 DAARQADVLVTVTRASTPLFSGDLLKPGAFVAAVGASKATVRELDDVAIKRAAALVVEWK 240 +AA QADVLVTVTR++TPLF G+LL+PGAFVAAVGASKA VRELDD AI RAAAL VEWK Sbjct: 175 EAAAQADVLVTVTRSATPLFDGELLRPGAFVAAVGASKANVRELDDTAIGRAAALFVEWK 234 Query: 241 PQAQIEAGDLVQCAPGTFDWANVWELGQAVDGSIGYKRKEGKDDDIVIYKAIGIGLEDVA 300 PQAQ EAGDLVQCAPG FDWA V EL QAVDGS+ Y+R+ DDIVIYK IGIGLEDVA Sbjct: 235 PQAQQEAGDLVQCAPGVFDWAQVMELAQAVDGSMPYQRRP---DDIVIYKGIGIGLEDVA 291 Query: 301 LAGLAYRKAAAQNGW 315 LAGLAYRKA A+ GW Sbjct: 292 LAGLAYRKACARYGW 306 >Q13XQ6.1 Q13XQ6_BURXL Ornithine cyclodeaminase EC=4.3.1.12 Length = 320 Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 150/313 (47%), Positives = 201/313 (64%), Gaps = 11/313 (3%) Query: 4 ITNQQVSELVTTADAVQAMREAFAARVRTSASNGVAQQARVRTSASNGVMLSMMGAVIPD 63 +T+ Q+ EL+ DA+ A+ F R A+ A Q RVRT A +GV LS +GAV+P+ Sbjct: 4 LTDAQIDELINIDDAIPALERGF----RGLANGHAAVQQRVRTEA-DGVKLSTLGAVVPE 58 Query: 64 AGIAGAKVYTTIKGAFKFVITLFSTETGAPLATIEGDTMTGLRTAAATAVACDALARKDV 123 G+AGAKVY+TI G F F I LFST G+ LAT+E + +T LRTAA T VA ALAR+ Sbjct: 59 LGVAGAKVYSTIAGRFNFSIVLFSTVDGSLLATLEANAITRLRTAATTVVAVRALARQQA 118 Query: 124 ETLAVIGTGVQARSHIPALLQVRKFKEILIAGLSGQQELADEVT---KTYGVPARVVEID 180 T A+ GTGVQ R+H AL + + I GL G +ELA EV+ + GV A V + Sbjct: 119 TTAAIFGTGVQGRAHALALAAHTQLRSFRIVGLEGTEELAAEVSAAGASRGVEAVVSDAA 178 Query: 181 DAARQADVLVTVTRASTPLFSGDLLKPGAFVAAVGASKATVRELDDVAIKRAAALVVEWK 240 DA R ADV+VT TRA+ LF G + GA VAA+G+S RELDD I RA+ +VVE + Sbjct: 179 DAVRGADVIVTATRATGALFDGTTVAQGALVAAIGSSLPHTRELDDALIARASRIVVELR 238 Query: 241 PQAQIEAGDLVQCAPGTFDWANVWELGQAVDGSIGYKRKEGKDDDIVIYKAIGIGLEDVA 300 QA+ EAGDLV PGTF W + ELG + +G ++ +DDD+++YKA+GIGL+D+ Sbjct: 239 DQARQEAGDLVLAKPGTFSWEDTVELGNVL---VGSEKGRVRDDDVIVYKAVGIGLQDIV 295 Query: 301 LAGLAYRKAAAQN 313 LAG+A+ K ++N Sbjct: 296 LAGIAWEKHVSRN 308 >D5NCM7.1 D5NCM7_9BURK Ornithine cyclodeaminase/mu-crystallin Length = 318 Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 149/300 (49%), Positives = 194/300 (64%), Gaps = 13/300 (4%) Query: 4 ITNQQVSELVTTADAVQAMREAFAARVRTSASNGVAQQARVRTSASNGVMLSMMGAVIPD 63 +T+QQ+ L+ +A+ A+ AF A R A A Q RVRT A GV LS +GAV+P+ Sbjct: 4 LTDQQIDALIGFDEAIPALDTAFRAFARGDA----AVQRRVRTEA-GGVKLSTLGAVVPE 58 Query: 64 AGIAGAKVYTTIKGAFKFVITLFSTETGAPLATIEGDTMTGLRTAAATAVACDALARKDV 123 G+AGAKVY+TI G F F I LFST+ G PLAT+E + +T LRTAA T +A ALA+ Sbjct: 59 LGVAGAKVYSTIAGRFNFSIILFSTDDGRPLATLEANAITRLRTAATTVLALRALAKPGA 118 Query: 124 ETLAVIGTGVQARSHIPALLQVRKFKEILIAGLSGQQELADEVTKTY---GVPARVVEID 180 ++A+ GTGVQ R+H AL + I GL G ELA E+ +TY GV AR + Sbjct: 119 RSVALFGTGVQGRAHAHALAAFTSLGDFRIVGLEGTAELAAELNRTYAQRGVEARPASAE 178 Query: 181 DAARQADVLVTVTRASTPLFSGDLLKPGAFVAAVGASKATVRELDDVAIKRAAALVVEWK 240 DA ADV+VT TRA+ LF G LL PGA +AA+G+S RELDD + RA+ +VVE + Sbjct: 179 DALDGADVVVTATRATGALFDGHLLSPGATIAAIGSSLPHARELDDTTVSRASRIVVELR 238 Query: 241 PQAQIEAGDLVQCAPGTFDWANVWELGQAVDG-SIGYKRKEGKDDDIVIYKAIGIGLEDV 299 QA+ EAGDLVQ A GTF W +V ELG ++G ++G + D DIV+YKA+GIGL+DV Sbjct: 239 EQAREEAGDLVQSAAGTFAWDDVLELGAVLEGFAVGRR----DDSDIVLYKAVGIGLQDV 294 >Q46UR5.1 Q46UR5_CUPPJ Ornithine cyclodeaminase EC=4.3.1.12 Length = 310 Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 144/310 (46%), Positives = 190/310 (61%), Gaps = 8/310 (2%) Query: 1 VKLITNQQVSELVTTADAVQAMREAFAARVRTSASNGVAQQARVRTSASNGVMLSMMGAV 60 ++ IT+ + V+ DA Q M AFA+ R A A Q R+RT A GV LS +GAV Sbjct: 1 MQHITDAMIDAHVSPEDARQVMEAAFASFGRGDA----AMQERIRTEA-GGVKLSTLGAV 55 Query: 61 IPDAGIAGAKVYTTIKGAFKFVITLFSTETGAPLATIEGDTMTGLRTAAATAVACDALAR 120 IP G AGAKVYTTI G F FVI +FSTE G PLA+ + +T LRTAA T +A L R Sbjct: 56 IPQQGFAGAKVYTTINGQFSFVILIFSTEDGRPLASFDAGAITRLRTAACTTLAAQRLVR 115 Query: 121 KDVETLAVIGTGVQARSHIPALLQVRKFKEILIAGLSGQQELADEVTKTYGVPARVVEID 180 TLA+ G G Q H L + IL++ + ++ G+P V E D Sbjct: 116 PGARTLALFGAGTQGVQHARQLSATLGLQRILVSDPHADAGMPARLSAQCGIPVVVSEPD 175 Query: 181 DAARQADVLVTVTRASTPLFSGDLLKPGAFVAAVGASKATVRELDDVAIKRAAALVVEWK 240 A +AD++VT +RA+TPLF+G L+PGAFVAA+G+S RELDD A++RAAA+VVEW+ Sbjct: 176 AAVAEADIVVTASRATTPLFAGASLRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWR 235 Query: 241 PQAQIEAGDLVQCAPGTFDWANVWELGQAVDGSIGYKRKEGKDDDIVIYKAIGIGLEDVA 300 PQ+ EAGD+V P + ELG V G + ++ +DDDIVIYK++G+GLEDVA Sbjct: 236 PQSTREAGDIVLADPQALPTEKIVELGDVVLGKVSPRQ---RDDDIVIYKSVGVGLEDVA 292 Query: 301 LAGLAYRKAA 310 LAG A+ + A Sbjct: 293 LAGFAWSRIA 302 >B3RBA0.1 B3RBA0_CUPTR Ornithine cyclodeaminase/mu-crystallin, similar to arcB EC=4.3.1.12 Length = 303 Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/300 (46%), Positives = 189/300 (63%), Gaps = 8/300 (2%) Query: 13 VTTADAVQAMREAFAARVRTSASNGVAQQARVRTSASNGVMLSMMGAVIPDAGIAGAKVY 72 VT A++ M AF++ R A A QAR+RT A GV LS +GAVIP G+AGAKVY Sbjct: 6 VTPEAALEVMASAFSSFGRGDA----AMQARIRTEA-GGVKLSTLGAVIPTQGVAGAKVY 60 Query: 73 TTIKGAFKFVITLFSTETGAPLATIEGDTMTGLRTAAATAVACDALARKDVETLAVIGTG 132 TTI G F FVI +FST+ G PLA+ + +T LRTAA T +A LAR TLA+ G G Sbjct: 61 TTINGQFSFVILIFSTDDGRPLASFDAGAITRLRTAACTTLAAQRLARAGARTLALFGAG 120 Query: 133 VQARSHIPALLQVRKFKEILIAGLSGQQELADEVTKTYGVPARVVEIDDAARQADVLVTV 192 Q H L + IL++ + + ++ G+P + E D A +AD++VT Sbjct: 121 TQGAQHARQLSAALGLERILVSDPHADAAMPERLSAQCGIPVALAEPDAAVAEADIIVTA 180 Query: 193 TRASTPLFSGDLLKPGAFVAAVGASKATVRELDDVAIKRAAALVVEWKPQAQIEAGDLVQ 252 +RA+TPLFSG ++PGAFVAA+G+S RELDD A++RAAA+VVEW+PQ+ EAGD+V Sbjct: 181 SRATTPLFSGAAIRPGAFVAAIGSSLPHTRELDDTALRRAAAVVVEWRPQSTREAGDIVL 240 Query: 253 CAPGTFDWANVWELGQAVDGSIGYKRKEGKDDDIVIYKAIGIGLEDVALAGLAYRKAAAQ 312 PG + EL V G + ++ +DDDIVIYK++G+GLEDVALAG A+ + A + Sbjct: 241 AGPGALPPEKIVELADVVIGKVSPRQ---RDDDIVIYKSVGVGLEDVALAGYAWSRIAGE 297