BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0069.p (298 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1K4V9.1 A1K4V9_AZOSB Putative transcriptional regulator, LysR f... 416 e-114 B1JWY0.1 B1JWY0_BURCC Transcriptional regulator, LysR family EC=... 399 e-109 B2JWU3.1 B2JWU3_BURP8 Transcriptional regulator, LysR family 392 e-107 B1G864.1 B1G864_9BURK Transcriptional regulator, LysR family 389 e-106 D8NSU2.1 D8NSU2_RALSO Putative transcriptional regulator (LysR f... 387 e-105 >A1K4V9.1 A1K4V9_AZOSB Putative transcriptional regulator, LysR family Length = 308 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 200/291 (68%), Positives = 233/291 (80%) Query: 5 TAPDLAFFVVLAKLGSLSGTARELGLTPPAVTKRLMMLEQRLGVRLVNRTTRRFSLTSEG 64 A +LAFF++LA GS + AREL LTPPAV+KRL +EQRLGVRL+NR+TRR SLT EG Sbjct: 4 VASELAFFLLLADKGSFTAAARELNLTPPAVSKRLAQIEQRLGVRLLNRSTRRVSLTDEG 63 Query: 65 ESYLAQATQILDRIRDMEESVSSGRAAPKGLLRVNATPGFGRTRIAPLVSRFAHDHPDVE 124 E YL A +I+ I DME S+ S RAAPKGLLRVNAT GFGRT IAP+VS FA HP+VE Sbjct: 64 ELYLEHARRIVADIEDMEASLGSRRAAPKGLLRVNATLGFGRTTIAPIVSAFARQHPEVE 123 Query: 125 VELQLTDRPISLVEEAYDLAIRFGELPDTRLSARKLMSNKRFLCASPAYLKKAGEPLTPE 184 V+LQLTD PI LV +DLAIRFGELPD+RLSARKLMSN+RFLCASPAYL G P TP Sbjct: 124 VQLQLTDAPIDLVATGFDLAIRFGELPDSRLSARKLMSNRRFLCASPAYLDAHGTPQTPA 183 Query: 185 ELHRHRCILHRQNDDVYGTWRLEKGKKIELVKVRGAVSSNDGDVVMNWALEGHGIVQRSE 244 EL RH CILHRQNDD YG WRL +G+ +E VKVRG +SSNDGDVV+ WAL+GHGI+ RSE Sbjct: 184 ELARHACILHRQNDDAYGIWRLARGRHVETVKVRGTLSSNDGDVVLGWALDGHGILIRSE 243 Query: 245 WDAAKYLASGRLKEVMPGYALPSANLYVYYLSRRNLPAKVRSFVDFLVAEF 295 WD AKYL SGRL+ V+P Y LP+A+LY Y +RRN PA+VR+F+DFL+A F Sbjct: 244 WDLAKYLESGRLRAVLPDYTLPTADLYAVYPARRNQPARVRAFIDFLLARF 294 >B1JWY0.1 B1JWY0_BURCC Transcriptional regulator, LysR family EC=4.2.1.1 Length = 320 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 188/298 (63%), Positives = 233/298 (78%) Query: 1 VKIETAPDLAFFVVLAKLGSLSGTARELGLTPPAVTKRLMMLEQRLGVRLVNRTTRRFSL 60 + +TA D FF++LAKL SLSG AR L L+PPA TKRL ++EQRLGVRLVNRTTR SL Sbjct: 3 TETQTATDFEFFILLAKLRSLSGAARALDLSPPAATKRLGVIEQRLGVRLVNRTTRSVSL 62 Query: 61 TSEGESYLAQATQILDRIRDMEESVSSGRAAPKGLLRVNATPGFGRTRIAPLVSRFAHDH 120 T EGE YL A+QI+ ++R+MEE +S G+ P+GLLR+NAT GFGRT IAPLVS FA + Sbjct: 63 TPEGEIYLRYASQIVGQVREMEEELSGGKGDPQGLLRINATLGFGRTTIAPLVSEFAKRY 122 Query: 121 PDVEVELQLTDRPISLVEEAYDLAIRFGELPDTRLSARKLMSNKRFLCASPAYLKKAGEP 180 P VEV+ ++TDRP+ LVE A+D+AIRFGELPD+RLSAR++MSN+RFLCASP YL+K G P Sbjct: 123 PSVEVQFEVTDRPVDLVEGAFDMAIRFGELPDSRLSARRIMSNRRFLCASPKYLEKYGSP 182 Query: 181 LTPEELHRHRCILHRQNDDVYGTWRLEKGKKIELVKVRGAVSSNDGDVVMNWALEGHGIV 240 E+L HRCI+HRQNDD YG WR IE +KV+GA+SSNDGD+V+ WALEGHG++ Sbjct: 183 ERVEDLAAHRCIIHRQNDDAYGVWRYIVNDHIETIKVKGALSSNDGDIVLRWALEGHGVL 242 Query: 241 QRSEWDAAKYLASGRLKEVMPGYALPSANLYVYYLSRRNLPAKVRSFVDFLVAEFKGP 298 RSEWD AKYL SGRL V+P LPSA+LYVYY ++N A+ R+F+DFLV F+ P Sbjct: 243 IRSEWDLAKYLQSGRLNLVLPNTVLPSADLYVYYPRQKNQTARARAFIDFLVNRFQAP 300 >B2JWU3.1 B2JWU3_BURP8 Transcriptional regulator, LysR family Length = 318 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/295 (61%), Positives = 233/295 (78%) Query: 4 ETAPDLAFFVVLAKLGSLSGTARELGLTPPAVTKRLMMLEQRLGVRLVNRTTRRFSLTSE 63 ++A D FF++LAKL S+SG AR L LTPPA TKRL ++E+RLG RLVNRTTR SLT E Sbjct: 4 DSASDFEFFILLAKLKSMSGAARALDLTPPAATKRLGIIERRLGARLVNRTTRSVSLTPE 63 Query: 64 GESYLAQATQILDRIRDMEESVSSGRAAPKGLLRVNATPGFGRTRIAPLVSRFAHDHPDV 123 GE+YL ATQI+ ++R+MEE++S P+GLLR+NAT GFGRT IAPLVS FA P+V Sbjct: 64 GETYLRYATQIVGQVREMEEAISGAGRDPQGLLRINATLGFGRTTIAPLVSDFAKRFPNV 123 Query: 124 EVELQLTDRPISLVEEAYDLAIRFGELPDTRLSARKLMSNKRFLCASPAYLKKAGEPLTP 183 EV+ ++TDRP+ L+E A+D+AIRFGELPD+RLSAR++MSN+RFLCASP YL++ G P Sbjct: 124 EVQFEVTDRPVDLIEGAFDMAIRFGELPDSRLSARRIMSNRRFLCASPKYLERFGTPERV 183 Query: 184 EELHRHRCILHRQNDDVYGTWRLEKGKKIELVKVRGAVSSNDGDVVMNWALEGHGIVQRS 243 ++L +HRCI+HRQNDD YG WR IE +KV+GA+SSNDGD+V+ WAL+GHGI+ RS Sbjct: 184 DDLQQHRCIIHRQNDDAYGVWRYIVNDHIEAIKVKGALSSNDGDIVLRWALDGHGILIRS 243 Query: 244 EWDAAKYLASGRLKEVMPGYALPSANLYVYYLSRRNLPAKVRSFVDFLVAEFKGP 298 EWD AKY+ SGRLK V+P LPSA+L+VYY +RN A+ R+F+DFLV F+ P Sbjct: 244 EWDLAKYVQSGRLKLVLPNTVLPSADLFVYYPRQRNQTARARAFIDFLVDRFQAP 298 >B1G864.1 B1G864_9BURK Transcriptional regulator, LysR family Length = 320 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 182/295 (61%), Positives = 231/295 (78%) Query: 4 ETAPDLAFFVVLAKLGSLSGTARELGLTPPAVTKRLMMLEQRLGVRLVNRTTRRFSLTSE 63 + A D FF++LAKL SLSG AR L L+PPA TKRL ++EQRLGVRLVNRTTR SLT E Sbjct: 6 QPATDFEFFILLAKLRSLSGAARALDLSPPAATKRLGVIEQRLGVRLVNRTTRSVSLTPE 65 Query: 64 GESYLAQATQILDRIRDMEESVSSGRAAPKGLLRVNATPGFGRTRIAPLVSRFAHDHPDV 123 GE+YL A+QI+ ++R+MEE++S + P+GLLR+NAT GFGRT IAPLVS FA P V Sbjct: 66 GETYLRYASQIVGQVREMEEAISGAKRDPQGLLRINATLGFGRTTIAPLVSEFAKRFPAV 125 Query: 124 EVELQLTDRPISLVEEAYDLAIRFGELPDTRLSARKLMSNKRFLCASPAYLKKAGEPLTP 183 EV+ ++TDRP+ LVE A+D+AIRFGELPD+RLSAR++MSN+RFLCASP YL+K G P Sbjct: 126 EVQFEVTDRPVDLVEGAFDMAIRFGELPDSRLSARRIMSNRRFLCASPKYLEKYGTPERV 185 Query: 184 EELHRHRCILHRQNDDVYGTWRLEKGKKIELVKVRGAVSSNDGDVVMNWALEGHGIVQRS 243 ++L HRCI+HRQNDD YG WR IE +KV+GA+SSNDGD+V+ WAL+GHGI+ RS Sbjct: 186 DDLAEHRCIIHRQNDDAYGVWRYIVNDHIEAIKVKGALSSNDGDIVLRWALDGHGILIRS 245 Query: 244 EWDAAKYLASGRLKEVMPGYALPSANLYVYYLSRRNLPAKVRSFVDFLVAEFKGP 298 EWD AKY+ SGRL V+P LPSA+L+VYY ++N + R+F+DFLV+ F+ P Sbjct: 246 EWDLAKYVQSGRLNLVLPNTVLPSADLFVYYPRQKNQTVRARAFIDFLVSRFQAP 300 >D8NSU2.1 D8NSU2_RALSO Putative transcriptional regulator (LysR family) Length = 310 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 186/296 (62%), Positives = 228/296 (77%) Query: 1 VKIETAPDLAFFVVLAKLGSLSGTARELGLTPPAVTKRLMMLEQRLGVRLVNRTTRRFSL 60 +K E A +L FF ++A+ GSL+ AREL LTPPA TKRL +E RLGVRLVNRTTR SL Sbjct: 1 MKTEIASELEFFTLIARHGSLAAAARELDLTPPAATKRLSQMESRLGVRLVNRTTRSISL 60 Query: 61 TSEGESYLAQATQILDRIRDMEESVSSGRAAPKGLLRVNATPGFGRTRIAPLVSRFAHDH 120 T+EGE+YLA A +IL +R+ME V+S + P+GLLRVNAT GFGRT IAPLVS FA + Sbjct: 61 TNEGETYLAYAQRILADLREMESVVASSGSEPRGLLRVNATLGFGRTTIAPLVSEFAKRY 120 Query: 121 PDVEVELQLTDRPISLVEEAYDLAIRFGELPDTRLSARKLMSNKRFLCASPAYLKKAGEP 180 VEV+L++TDRPI LVE DLAIRFG LPD RLSAR++MSN+RFLCASP YL+K G P Sbjct: 121 AQVEVQLEVTDRPIDLVESGVDLAIRFGTLPDKRLSARRIMSNRRFLCASPVYLEKFGTP 180 Query: 181 LTPEELHRHRCILHRQNDDVYGTWRLEKGKKIELVKVRGAVSSNDGDVVMNWALEGHGIV 240 + +LH HRCI+HRQNDD + WR E E VKV GA+SSNDGD+V+ WAL+GHGI+ Sbjct: 181 KSLSDLHHHRCIIHRQNDDTHAIWRFEHDGHHESVKVAGALSSNDGDIVLGWALDGHGIL 240 Query: 241 QRSEWDAAKYLASGRLKEVMPGYALPSANLYVYYLSRRNLPAKVRSFVDFLVAEFK 296 RSEWD AKYL SGRL+ V+P + LPSA+L+VYY RRN A+ R+F+DFLV +F+ Sbjct: 241 IRSEWDLAKYLESGRLRVVLPQFKLPSADLFVYYPQRRNQTARARAFIDFLVEKFQ 296