BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0046.p         (132 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IU83.1 D8IU83_HERSS Peptide methionine sulfoxide reductase Msr...   245   1e-63
F1VUV2.1 F1VUV2_9BURK Peptide methionine sulfoxide reductase MsrB     241   2e-62
A6SY90.1 A6SY90_JANMA Peptide methionine sulfoxide reductase Msr...   236   8e-61
A4G5V5.1 MSRB_HERAR Peptide methionine sulfoxide reductase MsrB ...   230   5e-59
D7DIZ6.1 D7DIZ6_METS0 Peptide methionine sulfoxide reductase Msr...   228   3e-58

>D8IU83.1 D8IU83_HERSS Peptide methionine sulfoxide reductase MsrB
           EC=1.8.4.12
          Length = 131

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 122/131 (93%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT +V+KT+A+WR QLD +EYQVTR AATERAFTG++WDHHEAG YTCVCC+TPLF SD 
Sbjct: 1   MTKRVEKTEAQWREQLDPLEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF+ +DPANVRE VD+S+GMIRTEI+CNVCDAHLGHVFPDGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>F1VUV2.1 F1VUV2_9BURK Peptide methionine sulfoxide reductase MsrB
          Length = 143

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/131 (83%), Positives = 119/131 (90%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT KV KTDAEWRA LD M+Y+VTRHAATERAFTG++WDHHE GIYTCVCCNTPLFASDT
Sbjct: 4   MTNKVTKTDAEWRAALDPMDYEVTRHAATERAFTGRYWDHHEHGIYTCVCCNTPLFASDT 63

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF AL+P NV+E+VD+SHGM RTEI+C VCDAHLGHVFPDGP PTGLRYC
Sbjct: 64  KFDSGCGWPSYFTALNPDNVKELVDRSHGMARTEIICAVCDAHLGHVFPDGPKPTGLRYC 123

Query: 121 INSASLRFDPA 131
           INSASL F PA
Sbjct: 124 INSASLSFAPA 134


>A6SY90.1 A6SY90_JANMA Peptide methionine sulfoxide reductase MsrB 2
           EC=1.8.4.12
          Length = 135

 Score =  236 bits (602), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 118/131 (90%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           M  KV KTDAEWRA LD  EY VTRHAATE  FTG++WDHHE GIYTCVCCNTPLFASDT
Sbjct: 1   MIDKVIKTDAEWRAMLDDEEYDVTRHAATEAPFTGRYWDHHEFGIYTCVCCNTPLFASDT 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYFK L+PANV+E +D+++GMIRTE++CNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFKPLNPANVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>A4G5V5.1 MSRB_HERAR Peptide methionine sulfoxide reductase MsrB EC=1.8.4.12
          Length = 137

 Score =  230 bits (587), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 115/129 (89%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT KV KTDAEWRA LD  EY VTRHAATE  F+G++WDHHE GIYTCVCCNTPLFASD 
Sbjct: 1   MTEKVIKTDAEWRAMLDDEEYDVTRHAATEAPFSGRYWDHHEHGIYTCVCCNTPLFASDA 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF AL+P NV+E +D+++GMIRTE++CNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFTALNPDNVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFD 129
           INSASLRFD
Sbjct: 121 INSASLRFD 129


>D7DIZ6.1 D7DIZ6_METS0 Peptide methionine sulfoxide reductase MsrB
           EC=1.8.4.12
          Length = 130

 Score =  228 bits (580), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 99/127 (77%), Positives = 116/127 (91%)

Query: 4   KVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDTKFD 63
           K+ KT++EW+ QL  ++Y+VTRHAATER FTG++ DH+EAGIYTCVCCNTPLF SDTKFD
Sbjct: 3   KIIKTESEWQNQLTPLQYEVTRHAATERPFTGQYADHNEAGIYTCVCCNTPLFESDTKFD 62

Query: 64  SGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYCINS 123
           +GCGWPSYFKAL+P NVRE+ D +HGMIRTE++CNVCDAHLGHVFPDGPPPTGLRYCINS
Sbjct: 63  AGCGWPSYFKALNPENVRELKDSTHGMIRTEVICNVCDAHLGHVFPDGPPPTGLRYCINS 122

Query: 124 ASLRFDP 130
           ASL F+P
Sbjct: 123 ASLSFEP 129