BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0019.p (439 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1WLF6.1 A1WLF6_VEREI Putative branched-chain amino acid transpo... 795 0.0 D8IWP2.1 D8IWP2_HERSS ABC-type amino acid transport system, peri... 794 0.0 Q1LRX2.1 Q1LRX2_RALME ABC-type transporter, periplasmic componen... 777 0.0 F1VYM8.1 F1VYM8_9BURK Leucine-, isoleucine-, valine-, threonine-... 775 0.0 Q0KEY1.1 Q0KEY1_CUPNH ABC-type transporter, periplasmic componen... 761 0.0 >A1WLF6.1 A1WLF6_VEREI Putative branched-chain amino acid transport system substrate-binding protein Length = 441 Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/440 (87%), Positives = 422/440 (95%), Gaps = 1/440 (0%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 MK+IK LAA +AASLL PA AMAQA+DQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY Sbjct: 1 MKSIKHPGLAAILAASLLLPAQSAMAQANDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTKGTAINSMATGISYALIDK 120 VN+KEGG++GVK+SWEECETEYNNAKGVECYERMK++NPVT+GTAIN+MATGISYALIDK Sbjct: 61 VNMKEGGIDGVKISWEECETEYNNAKGVECYERMKSRNPVTRGTAINTMATGISYALIDK 120 Query: 121 SVEDKVPLLMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLTTKNGGSLAGKKIVF 180 + EDKVPLLM+GYGRTDAVDGSVFPYAFPLVTTYQMQ SA+VKF+ ++NGGSLAGKKIVF Sbjct: 121 TAEDKVPLLMLGYGRTDAVDGSVFPYAFPLVTTYQMQASAVVKFIASRNGGSLAGKKIVF 180 Query: 181 LYHDSAYGKEPIVALEAEATLGKFKVVQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVAL+AEA+LGKF +V+IPVAHPGNEQGAQWL+IRQENPDYVIFWGWGV Sbjct: 181 LYHDSAYGKEPIVALQAEASLGKFTLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 Query: 241 MNQTALKAAQKVGFARDKIIGSWWAGSEEDTIPAGDAAKGYMSATWNVAGKGVPLIADIE 300 MNQTALKAAQKVG++R+K++GSWWAGSEEDTIPAGDAAKGYMSATWNV GK VPLIADIE Sbjct: 241 MNQTALKAAQKVGYSREKMVGSWWAGSEEDTIPAGDAAKGYMSATWNVTGKDVPLIADIE 300 Query: 301 KVVYGAGKGNLQDKAKIGSILYNRGVSAAIATVEAVRTAQGKFGK-KVMSGEDVRWGLEN 359 KVVYGAGKGN+QDK KIGS LYNRGVS A+AT+EAVRTAQGKFGK KVMSGE +RWGLEN Sbjct: 301 KVVYGAGKGNMQDKGKIGSALYNRGVSGALATIEAVRTAQGKFGKGKVMSGEHMRWGLEN 360 Query: 360 LNITNARLQQLGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 419 LNITNARLQQLGATGLLPEIKTSC+NHEGSGK+KIQQWDGSKWVLVSDWIEGNKNLIHPL Sbjct: 361 LNITNARLQQLGATGLLPEIKTSCENHEGSGKIKIQQWDGSKWVLVSDWIEGNKNLIHPL 420 Query: 420 FKASAAKYAKEKGITPACMK 439 FKASAA+YAKEKGITPACM+ Sbjct: 421 FKASAARYAKEKGITPACMQ 440 >D8IWP2.1 D8IWP2_HERSS ABC-type amino acid transport system, periplasmic component protein Length = 443 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/440 (89%), Positives = 423/440 (96%), Gaps = 1/440 (0%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 +K+++QL+LA AASLL+ A PA+AQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY Sbjct: 4 IKHLRQLLLATACAASLLSAAAPALAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 63 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTKGTAINSMATGISYALIDK 120 +N+KEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVT GTAIN MATGISYALIDK Sbjct: 64 INIKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTHGTAINPMATGISYALIDK 123 Query: 121 SVEDKVPLLMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLTTKNGGSLAGKKIVF 180 + EDKVPL+M+GYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVK+L KN GSLAGKKIVF Sbjct: 124 TAEDKVPLVMIGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKYLAGKNNGSLAGKKIVF 183 Query: 181 LYHDSAYGKEPIVALEAEATLGKFKVVQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVAL+AEA++GKFK+V+IPVAHPGNEQGAQWL+IRQENPDYVIFWGWGV Sbjct: 184 LYHDSAYGKEPIVALQAEASIGKFKLVEIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 243 Query: 241 MNQTALKAAQKVGFARDKIIGSWWAGSEEDTIPAGDAAKGYMSATWNVAGKGVPLIADIE 300 MNQTALKAAQKVG+ARDKI+GSWWAGSEEDTIPAGDAAKGY+SATWNVAGK VP+IADI+ Sbjct: 244 MNQTALKAAQKVGYARDKIVGSWWAGSEEDTIPAGDAAKGYLSATWNVAGKDVPVIADID 303 Query: 301 KVVYGAGKGNLQDKAKIGSILYNRGVSAAIATVEAVRTAQGKFGK-KVMSGEDVRWGLEN 359 KVVYGAGKGN+QDK K+GSILYNRGVSAAIATVEAVRTAQGK+GK KVMSGE VRWG EN Sbjct: 304 KVVYGAGKGNMQDKNKLGSILYNRGVSAAIATVEAVRTAQGKYGKGKVMSGEQVRWGFEN 363 Query: 360 LNITNARLQQLGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 419 LNIT+ARL+ LGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL Sbjct: 364 LNITDARLKALGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 423 Query: 420 FKASAAKYAKEKGITPACMK 439 FKASAAKYAKEKGITPACMK Sbjct: 424 FKASAAKYAKEKGITPACMK 443 >Q1LRX2.1 Q1LRX2_RALME ABC-type transporter, periplasmic component: HAAT family Length = 445 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/440 (83%), Positives = 414/440 (94%), Gaps = 1/440 (0%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 +N+++ L +VAA++L PALPA+AQ +DQF+A+PSYRVGPYG NGQS+YGG+VDYLNY Sbjct: 5 FRNVQRAALVVSVAAAMLVPALPALAQTNDQFVALPSYRVGPYGANGQSFYGGFVDYLNY 64 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTKGTAINSMATGISYALIDK 120 VNLKEGGVNGVKL WEECETEYNNAKGVECYER+K K+ +KGTA ++M+TGISYAL+DK Sbjct: 65 VNLKEGGVNGVKLGWEECETEYNNAKGVECYERLKAKSSASKGTAYHTMSTGISYALVDK 124 Query: 121 SVEDKVPLLMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLTTKNGGSLAGKKIVF 180 + DKVPL+MMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFL +KNGGSLAGKKIV+ Sbjct: 125 TAADKVPLVMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLASKNGGSLAGKKIVY 184 Query: 181 LYHDSAYGKEPIVALEAEATLGKFKVVQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 240 LYHDSAYGKEPIVALEAEA LGKF +V+IPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV Sbjct: 185 LYHDSAYGKEPIVALEAEAKLGKFNLVEIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 244 Query: 241 MNQTALKAAQKVGFARDKIIGSWWAGSEEDTIPAGDAAKGYMSATWNVAGKGVPLIADIE 300 MNQTALKAAQKVG++RDK+IGSWWAGSEEDT+PAG+AAKGYMSATWNVAGK VPLIADIE Sbjct: 245 MNQTALKAAQKVGYSRDKMIGSWWAGSEEDTVPAGEAAKGYMSATWNVAGKNVPLIADIE 304 Query: 301 KVVYGAGKGNLQDKAKIGSILYNRGVSAAIATVEAVRTAQGKFGK-KVMSGEDVRWGLEN 359 KVVYGAGKGN+QD+ K+GS+LYNRGVSAA+ TVEA+R AQ KFGK KVMSG+++RW EN Sbjct: 305 KVVYGAGKGNMQDRNKVGSVLYNRGVSAAVVTVEAIRGAQAKFGKGKVMSGDEMRWAFEN 364 Query: 360 LNITNARLQQLGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 419 LN+T+ARLQQ+GATGLLPEIKTSCDNHEGSGKVKIQQWDG+KWV+VSDWIEGNK+LIHPL Sbjct: 365 LNLTSARLQQVGATGLLPEIKTSCDNHEGSGKVKIQQWDGAKWVVVSDWIEGNKSLIHPL 424 Query: 420 FKASAAKYAKEKGITPACMK 439 FKA+AA+YAKEKGITPACMK Sbjct: 425 FKATAAQYAKEKGITPACMK 444 >F1VYM8.1 F1VYM8_9BURK Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein Length = 440 Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/440 (84%), Positives = 411/440 (93%), Gaps = 1/440 (0%) Query: 1 MKNIKQLVLAATVAASLLAPALPAMAQASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNY 60 M +K ++ AA A+LLAP A+AQA+DQFIAIPSYRVGPYG NGQS+YGGYVDYLNY Sbjct: 1 MTKLKNILFAAATVATLLAPMTQAVAQANDQFIAIPSYRVGPYGANGQSFYGGYVDYLNY 60 Query: 61 VNLKEGGVNGVKLSWEECETEYNNAKGVECYERMKNKNPVTKGTAINSMATGISYALIDK 120 +N+KEGGVNGVKLSWEECETEYNNAKGVECYER+KNKNP+TKGTA N MATGISYALIDK Sbjct: 61 INMKEGGVNGVKLSWEECETEYNNAKGVECYERLKNKNPITKGTAYNVMATGISYALIDK 120 Query: 121 SVEDKVPLLMMGYGRTDAVDGSVFPYAFPLVTTYQMQVSAIVKFLTTKNGGSLAGKKIVF 180 + EDKVPL+M+GYGRTDAVDGSVFPYAFPLVTTYQMQ SAIVK+LTTKNGGSLAGKKI F Sbjct: 121 TAEDKVPLMMVGYGRTDAVDGSVFPYAFPLVTTYQMQASAIVKYLTTKNGGSLAGKKIAF 180 Query: 181 LYHDSAYGKEPIVALEAEATLGKFKVVQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGV 240 LYHDSAYGKEPI ALEAE+ +GKF +VQIPVAHPGNEQGAQWL+IRQENPDYVIFWGWGV Sbjct: 181 LYHDSAYGKEPIGALEAESLIGKFALVQIPVAHPGNEQGAQWLRIRQENPDYVIFWGWGV 240 Query: 241 MNQTALKAAQKVGFARDKIIGSWWAGSEEDTIPAGDAAKGYMSATWNVAGKGVPLIADIE 300 MNQTA+KAAQKVG++R+K+IGSWWAGSEEDT+PAG+AAKGYMSATWNV+GK VP+I DIE Sbjct: 241 MNQTAMKAAQKVGYSREKMIGSWWAGSEEDTVPAGEAAKGYMSATWNVSGKNVPVITDIE 300 Query: 301 KVVYGAGKGNLQDKAKIGSILYNRGVSAAIATVEAVRTAQGKFGK-KVMSGEDVRWGLEN 359 KVVY AGKGN+QD+AK+G+ILYNRGVS AIATVEA+RTAQGK+GK KV+SGE +RWGLEN Sbjct: 301 KVVYAAGKGNMQDQAKVGTILYNRGVSVAIATVEAIRTAQGKYGKGKVISGEQMRWGLEN 360 Query: 360 LNITNARLQQLGATGLLPEIKTSCDNHEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPL 419 LNITNARL LGATGLLPEIKTSCDNHEGSGKVKIQQWDG+KWVL+SDWIEGNK LIHPL Sbjct: 361 LNITNARLGTLGATGLLPEIKTSCDNHEGSGKVKIQQWDGAKWVLISDWIEGNKALIHPL 420 Query: 420 FKASAAKYAKEKGITPACMK 439 FKA+AAKYAKEK ITPACMK Sbjct: 421 FKANAAKYAKEKNITPACMK 440 >Q0KEY1.1 Q0KEY1_CUPNH ABC-type transporter, periplasmic component: HAAT family Length = 445 Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/414 (86%), Positives = 393/414 (94%), Gaps = 1/414 (0%) Query: 27 QASDQFIAIPSYRVGPYGTNGQSYYGGYVDYLNYVNLKEGGVNGVKLSWEECETEYNNAK 86 Q+++QF+A+PSYRVGPYG NGQS+YGG++DYLNYVNLKEGGVNGVKLSWEECETEYNNAK Sbjct: 31 QSNEQFVALPSYRVGPYGANGQSWYGGFIDYLNYVNLKEGGVNGVKLSWEECETEYNNAK 90 Query: 87 GVECYERMKNKNPVTKGTAINSMATGISYALIDKSVEDKVPLLMMGYGRTDAVDGSVFPY 146 GVECYER+K+KN TKGTA ++M+TGISYAL+DK+ DKVPL+MMGYGRTDAVDGSVFPY Sbjct: 91 GVECYERLKSKNATTKGTAYHAMSTGISYALVDKTAADKVPLVMMGYGRTDAVDGSVFPY 150 Query: 147 AFPLVTTYQMQVSAIVKFLTTKNGGSLAGKKIVFLYHDSAYGKEPIVALEAEATLGKFKV 206 AFPLVTTYQMQVSAIVK+L +KNGGSLAGKKIV+LYHDSAYGKEPIVAL+AEA LGKF + Sbjct: 151 AFPLVTTYQMQVSAIVKYLASKNGGSLAGKKIVYLYHDSAYGKEPIVALQAEAKLGKFNL 210 Query: 207 VQIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGVMNQTALKAAQKVGFARDKIIGSWWAG 266 V+IPVAHPGNEQGAQWLKIRQENPDYVIFWGWGVMNQTALKAAQKVGFARDKIIGSWWAG Sbjct: 211 VEIPVAHPGNEQGAQWLKIRQENPDYVIFWGWGVMNQTALKAAQKVGFARDKIIGSWWAG 270 Query: 267 SEEDTIPAGDAAKGYMSATWNVAGKGVPLIADIEKVVYGAGKGNLQDKAKIGSILYNRGV 326 SEEDT+PAGDA+KGYMSATWNVAG+ VPLIADIEKVVYGAGKGN+QDK K+GS+LYNRGV Sbjct: 271 SEEDTVPAGDASKGYMSATWNVAGRNVPLIADIEKVVYGAGKGNMQDKNKVGSVLYNRGV 330 Query: 327 SAAIATVEAVRTAQGKFGK-KVMSGEDVRWGLENLNITNARLQQLGATGLLPEIKTSCDN 385 SAA+ TVEAVR AQ KFGK K M+GE +RW ENLN+TNARLQQLGATGLLPEIKTSCDN Sbjct: 331 SAAVVTVEAVRVAQAKFGKGKPMTGEQMRWAFENLNLTNARLQQLGATGLLPEIKTSCDN 390 Query: 386 HEGSGKVKIQQWDGSKWVLVSDWIEGNKNLIHPLFKASAAKYAKEKGITPACMK 439 HEGSGKVKIQQWDG+KWV+VSDWIEGNK LIHPLFKA+AA+YAKEKGITPAC K Sbjct: 391 HEGSGKVKIQQWDGTKWVVVSDWIEGNKGLIHPLFKATAAQYAKEKGITPACSK 444