BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0080.p         (96 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0I4.1 D8J0I4_HERSS Cobalt/zinc/cadmium resistance two compone...   188   2e-46
Q7WEU0.1 Q7WEU0_BORBR Response regulatory protein                     159   2e-37
D5WH14.1 D5WH14_BURSC Two component transcriptional regulator, w...   158   3e-37
Q13NX2.1 Q13NX2_BURXL Putative uncharacterized protein                158   3e-37
D5NHZ0.1 D5NHZ0_9BURK Two component heavy metal response transcr...   158   3e-37

>D8J0I4.1 D8J0I4_HERSS Cobalt/zinc/cadmium resistance two component response
           regulator protein
          Length = 223

 Score =  188 bits (477), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/96 (91%), Positives = 94/96 (97%)

Query: 1   VADLQLDHVRHKVTRQGVNIVLTNKEFLLLHLLIKRQGEALSRSVIASQVWDMNFDSDTN 60
           +ADLQLDHVRHKVTRQGVNI LTNKEF+LLHLLIKRQGEALSRSVIASQ+WDMNFDSDTN
Sbjct: 128 IADLQLDHVRHKVTRQGVNIALTNKEFMLLHLLIKRQGEALSRSVIASQIWDMNFDSDTN 187

Query: 61  VVDVAVKRLRAKIDAPFEKKLIHTVRSIGYMFSETP 96
           VVDVA+KRLRAKIDAPF+KKLIHTVRS+GYMFSE P
Sbjct: 188 VVDVAIKRLRAKIDAPFDKKLIHTVRSVGYMFSEEP 223


>Q7WEU0.1 Q7WEU0_BORBR Response regulatory protein
          Length = 223

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/96 (78%), Positives = 85/96 (88%)

Query: 1   VADLQLDHVRHKVTRQGVNIVLTNKEFLLLHLLIKRQGEALSRSVIASQVWDMNFDSDTN 60
           VADL+LD VR KVTR G +IVLTNKEF+LLHLLI+RQGEALSR++IAS+VWDMNFDSDTN
Sbjct: 128 VADLRLDPVRRKVTRGGASIVLTNKEFMLLHLLIRRQGEALSRTIIASEVWDMNFDSDTN 187

Query: 61  VVDVAVKRLRAKIDAPFEKKLIHTVRSIGYMFSETP 96
           VVDVA+KRLRAK+DAPF  KLI TVR IGY  +E P
Sbjct: 188 VVDVAIKRLRAKVDAPFPLKLIQTVRGIGYALAEQP 223


>D5WH14.1 D5WH14_BURSC Two component transcriptional regulator, winged helix
           family
          Length = 223

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/95 (77%), Positives = 88/95 (92%)

Query: 1   VADLQLDHVRHKVTRQGVNIVLTNKEFLLLHLLIKRQGEALSRSVIASQVWDMNFDSDTN 60
           VADL+LD +R +VTR+GV+I LTNKEF+LLHLL++R+GEALSRS IAS+VWDMNFDSDTN
Sbjct: 128 VADLKLDVLRRRVTREGVDIPLTNKEFMLLHLLVRREGEALSRSQIASEVWDMNFDSDTN 187

Query: 61  VVDVAVKRLRAKIDAPFEKKLIHTVRSIGYMFSET 95
           VVDVA+KRLRAK+D PFEKKLIHTVRSIGY F ++
Sbjct: 188 VVDVAIKRLRAKVDHPFEKKLIHTVRSIGYTFGDS 222


>Q13NX2.1 Q13NX2_BURXL Putative uncharacterized protein
          Length = 223

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/94 (78%), Positives = 86/94 (91%)

Query: 1   VADLQLDHVRHKVTRQGVNIVLTNKEFLLLHLLIKRQGEALSRSVIASQVWDMNFDSDTN 60
           +ADL+LD +R KVTR+GV I LTNKEF+LLHLL++RQGEALSR+ IAS+VWDMNFDSDTN
Sbjct: 128 IADLKLDVLRRKVTREGVEIPLTNKEFMLLHLLVRRQGEALSRTQIASEVWDMNFDSDTN 187

Query: 61  VVDVAVKRLRAKIDAPFEKKLIHTVRSIGYMFSE 94
           VVDVA+KRLRAK+D PFEKKLIHTVRSIGY F +
Sbjct: 188 VVDVAIKRLRAKVDHPFEKKLIHTVRSIGYTFGD 221


>D5NHZ0.1 D5NHZ0_9BURK Two component heavy metal response transcriptional
           regulator, winged helix family
          Length = 223

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 74/94 (78%), Positives = 86/94 (91%)

Query: 1   VADLQLDHVRHKVTRQGVNIVLTNKEFLLLHLLIKRQGEALSRSVIASQVWDMNFDSDTN 60
           +ADL+LD +R KVTR+GV I LTNKEF+LLHLL++RQGEALSR+ IAS+VWDMNFDSDTN
Sbjct: 128 IADLKLDVLRRKVTREGVEIPLTNKEFMLLHLLVRRQGEALSRTQIASEVWDMNFDSDTN 187

Query: 61  VVDVAVKRLRAKIDAPFEKKLIHTVRSIGYMFSE 94
           VVDVA+KRLRAK+D PFEKKLIHTVRSIGY F +
Sbjct: 188 VVDVAIKRLRAKVDHPFEKKLIHTVRSIGYTFGD 221