BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0074.p         (160 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0I9.1 D8J0I9_HERSS Cytochrome bd-type quinol oxidase, subunit...   241   2e-62
B1JYR4.1 B1JYR4_BURCC Cytochrome bd ubiquinol oxidase subunit I       181   4e-44
A2VVA8.1 A2VVA8_9BURK Cytochrome bd-type quinol oxidase, subunit 1    181   4e-44
Q1BTF1.1 Q1BTF1_BURCA Cytochrome bd quinol oxidase subunit 1 apo...   180   5e-44
A0KAP0.1 A0KAP0_BURCH Cytochrome bd quinol oxidase subunit 1 apo...   180   5e-44

>D8J0I9.1 D8J0I9_HERSS Cytochrome bd-type quinol oxidase, subunit 1, protein
           EC=1.10.3.-
          Length = 541

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 119/149 (79%), Positives = 129/149 (86%)

Query: 1   VAPLFWSFRGMVALGMLFLFIFSASFYFLVRKQLAPQRWLLRLAVFSIPLPWIAAELGWI 60
           VAPLFWSFRGMVALG LFLFIFSASF+FL +KQLAPQRWLLRLAV SIPLPWIAAELGWI
Sbjct: 386 VAPLFWSFRGMVALGFLFLFIFSASFWFLAKKQLAPQRWLLRLAVISIPLPWIAAELGWI 445

Query: 61  VAEYGRQPWTIAGILPTRLSASTLQASSLYFSLAGFVLFYTFLLVVEMMLMIKYAKRGPS 120
           VAEYGRQPWTIAGILPT LSAS+LQ  SLYFSLAGF+LFYTFLLVVEM+LM+KYA+ GPS
Sbjct: 446 VAEYGRQPWTIAGILPTHLSASSLQPGSLYFSLAGFILFYTFLLVVEMILMVKYARLGPS 505

Query: 121 SLHTGKYHWELLEKTKKPAVAAKPPVPPQ 149
           SLHTG+Y+WE   K   P     PP+ P 
Sbjct: 506 SLHTGQYYWENKGKESGPGDVLPPPLNPS 534


>B1JYR4.1 B1JYR4_BURCC Cytochrome bd ubiquinol oxidase subunit I
          Length = 526

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 110/142 (77%), Gaps = 2/142 (1%)

Query: 1   VAPLFWSFRGMVALGMLFLFIFSASFYFLVRKQL--APQRWLLRLAVFSIPLPWIAAELG 58
           VAP+F+SFR MV LG LF+  F A+F+F  R+QL    +RW LR AV++IPLPWIA E G
Sbjct: 385 VAPVFFSFRIMVFLGFLFVATFVAAFWFCARRQLLQDNRRWFLRYAVWAIPLPWIAIEFG 444

Query: 59  WIVAEYGRQPWTIAGILPTRLSASTLQASSLYFSLAGFVLFYTFLLVVEMMLMIKYAKRG 118
           WIVAE GRQPWTIAG+LPT LSAS+LQ S LY SLAGF+LFYT L V+E+ LM KYA+ G
Sbjct: 445 WIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVIEIKLMFKYARLG 504

Query: 119 PSSLHTGKYHWELLEKTKKPAV 140
           PSSLHTG+YH EL    ++ AV
Sbjct: 505 PSSLHTGRYHHELAAAGERAAV 526


>A2VVA8.1 A2VVA8_9BURK Cytochrome bd-type quinol oxidase, subunit 1
          Length = 526

 Score =  181 bits (458), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 110/142 (77%), Gaps = 2/142 (1%)

Query: 1   VAPLFWSFRGMVALGMLFLFIFSASFYFLVRKQL--APQRWLLRLAVFSIPLPWIAAELG 58
           VAP+F+SFR MV LG LF+  F A+F+F  R+QL    +RW LR AV++IPLPWIA E G
Sbjct: 385 VAPVFFSFRIMVFLGFLFVATFVAAFWFCARRQLLQDNRRWFLRYAVWAIPLPWIAIEFG 444

Query: 59  WIVAEYGRQPWTIAGILPTRLSASTLQASSLYFSLAGFVLFYTFLLVVEMMLMIKYAKRG 118
           WIVAE GRQPWTIAG+LPT LSAS+LQ S LY SLAGF+LFYT L V+E+ LM KYA+ G
Sbjct: 445 WIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVIEIKLMFKYARLG 504

Query: 119 PSSLHTGKYHWELLEKTKKPAV 140
           PSSLHTG+YH EL    ++ AV
Sbjct: 505 PSSLHTGRYHHELAAAGERAAV 526


>Q1BTF1.1 Q1BTF1_BURCA Cytochrome bd quinol oxidase subunit 1 apoprotein
           EC=1.10.3.-
          Length = 526

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 110/142 (77%), Gaps = 2/142 (1%)

Query: 1   VAPLFWSFRGMVALGMLFLFIFSASFYFLVRKQL--APQRWLLRLAVFSIPLPWIAAELG 58
           VAP+F+SFR MV LG LF+  F A+F+F  R+QL    +RW LR AV++IPLPWIA E G
Sbjct: 385 VAPVFFSFRIMVFLGFLFVATFIAAFWFCARRQLLQDNRRWFLRYAVWAIPLPWIAIEFG 444

Query: 59  WIVAEYGRQPWTIAGILPTRLSASTLQASSLYFSLAGFVLFYTFLLVVEMMLMIKYAKRG 118
           WIVAE GRQPWTIAG+LPT LSAS+LQ S LY SLAGF+LFYT L V+E+ LM KYA+ G
Sbjct: 445 WIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVIEIKLMFKYARLG 504

Query: 119 PSSLHTGKYHWELLEKTKKPAV 140
           PSSLHTG+YH EL    ++ AV
Sbjct: 505 PSSLHTGRYHHELAAAGERAAV 526


>A0KAP0.1 A0KAP0_BURCH Cytochrome bd quinol oxidase subunit 1 apoprotein
           EC=1.10.3.-
          Length = 526

 Score =  180 bits (457), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 110/142 (77%), Gaps = 2/142 (1%)

Query: 1   VAPLFWSFRGMVALGMLFLFIFSASFYFLVRKQL--APQRWLLRLAVFSIPLPWIAAELG 58
           VAP+F+SFR MV LG LF+  F A+F+F  R+QL    +RW LR AV++IPLPWIA E G
Sbjct: 385 VAPVFFSFRIMVFLGFLFVATFIAAFWFCARRQLLQDNRRWFLRYAVWAIPLPWIAIEFG 444

Query: 59  WIVAEYGRQPWTIAGILPTRLSASTLQASSLYFSLAGFVLFYTFLLVVEMMLMIKYAKRG 118
           WIVAE GRQPWTIAG+LPT LSAS+LQ S LY SLAGF+LFYT L V+E+ LM KYA+ G
Sbjct: 445 WIVAELGRQPWTIAGVLPTHLSASSLQPSDLYLSLAGFILFYTALFVIEIKLMFKYARLG 504

Query: 119 PSSLHTGKYHWELLEKTKKPAV 140
           PSSLHTG+YH EL    ++ AV
Sbjct: 505 PSSLHTGRYHHELAAAGERAAV 526