BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0058.p (291 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0K0.1 D8J0K0_HERSS ABC-type branched-chain amino acid transpo... 401 e-110 A4TZF5.1 A4TZF5_9PROT Urea/short-chain binding protein of ABC tr... 335 5e-90 A0SZ73.2 A0SZ73_9BURK Putative ABC transport protein (Fragment) 319 3e-85 E8U068.1 E8U068_ALIDB Branched-chain amino acid ABC transporter ... 318 9e-85 E5UEZ0.1 E5UEZ0_ALCXX ABC transporter 296 3e-78 >D8J0K0.1 D8J0K0_HERSS ABC-type branched-chain amino acid transport system,periplasmic component protein Length = 410 Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust. Identities = 202/207 (97%), Positives = 205/207 (99%) Query: 1 VTRAREWLDRDKVEAIADLTNSSVALAVQKLIKEKGGIAMYSGPATGALTTAECASNGFH 60 VTRAREWLDRDKVEAIADLTNSSVALAVQKLIK+KGGIAMYSGPATGALTTAECA NGFH Sbjct: 92 VTRAREWLDRDKVEAIADLTNSSVALAVQKLIKDKGGIAMYSGPATGALTTAECAPNGFH 151 Query: 61 WMFDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVLGSVRHPL 120 WMFDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTV+GSVRHPL Sbjct: 152 WMFDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVVGSVRHPL 211 Query: 121 NASDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVGGKDQRLVALLVFLSDVHA 180 NASDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVGGKDQRLVALLVFLSDVHA Sbjct: 212 NASDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVGGKDQRLVALLVFLSDVHA 271 Query: 181 LGLDAAQGLVYTDGFYWDYDEQTRGFS 207 LGL+AAQGLVYTDGFYWDYDEQTR FS Sbjct: 272 LGLEAAQGLVYTDGFYWDYDEQTRAFS 298 >A4TZF5.1 A4TZF5_9PROT Urea/short-chain binding protein of ABC transporter Length = 407 Score = 335 bits (859), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 161/204 (78%), Positives = 178/204 (87%) Query: 4 AREWLDRDKVEAIADLTNSSVALAVQKLIKEKGGIAMYSGPATGALTTAECASNGFHWMF 63 AR+WL++DKV+A+ DLTNSSV+LAVQKLIKEKGGIAMYSGPAT LT +CA+NGFHWMF Sbjct: 91 ARQWLEQDKVDAMVDLTNSSVSLAVQKLIKEKGGIAMYSGPATTRLTNDDCAANGFHWMF 150 Query: 64 DTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVLGSVRHPLNAS 123 DTYSQAA AAALTKLG K+WYF+TVDYAFGHSLEKDA D V ANGGTVLG+VRHPLN S Sbjct: 151 DTYSQAAVGAAALTKLGLKNWYFITVDYAFGHSLEKDAGDQVTANGGTVLGAVRHPLNNS 210 Query: 124 DFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVGGKDQRLVALLVFLSDVHALGL 183 DFSSFLLQAQ SKAQVIGLA+GG D VNAIKQA+ F +GGKDQ+L ALLVFLSDVHALGL Sbjct: 211 DFSSFLLQAQGSKAQVIGLANGGQDTVNAIKQAKEFGIGGKDQKLAALLVFLSDVHALGL 270 Query: 184 DAAQGLVYTDGFYWDYDEQTRGFS 207 AQGL Y DGFYWD D+ TR + Sbjct: 271 PTAQGLSYADGFYWDADDDTRALA 294 >A0SZ73.2 A0SZ73_9BURK Putative ABC transport protein (Fragment) Length = 309 Score = 319 bits (817), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 155/182 (85%), Positives = 169/182 (92%), Gaps = 1/182 (0%) Query: 2 TRAREWLDRDKVEAIADLTNSSVALAVQKLIKEKGGIAMYSGPATGALTTAECASNGFHW 61 ++AREW+DRDKV+AIADLTNSSVAL+VQKL+KEKGGIAM+SGPATG LT +C+ NGFHW Sbjct: 128 SKAREWIDRDKVDAIADLTNSSVALSVQKLMKEKGGIAMFSGPATGRLTNEDCSPNGFHW 187 Query: 62 MFDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVLGSVRHPLN 121 MFDTYSQAAG AAALTKLG KSWYFVTVDYAFGHSLEKDASDVVK NGGTVLG+VRHPLN Sbjct: 188 MFDTYSQAAGTAAALTKLGQKSWYFVTVDYAFGHSLEKDASDVVKRNGGTVLGAVRHPLN 247 Query: 122 ASDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVG-GKDQRLVALLVFLSDVHA 180 ASDFSSFL+QAQ SKAQVIGLA+GG DVV+AIKQAR F +G GKDQRL ALLVFLSDVHA Sbjct: 248 ASDFSSFLVQAQGSKAQVIGLANGGADVVSAIKQAREFRIGSGKDQRLAALLVFLSDVHA 307 Query: 181 LG 182 LG Sbjct: 308 LG 309 >E8U068.1 E8U068_ALIDB Branched-chain amino acid ABC transporter periplasmic protein Length = 405 Score = 318 bits (814), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 160/208 (76%), Positives = 185/208 (88%), Gaps = 2/208 (0%) Query: 2 TRAREWLDRDKVEAIADLTNSSVALAVQKLIKEKGGIAMYSGPATGALTTAECASNGFHW 61 T+AREWLDRDKV+A+ADLTNS+ ALAVQKLIKEKGGIAMYSGPAT LT +CA NGFHW Sbjct: 85 TKAREWLDRDKVDALADLTNSAGALAVQKLIKEKGGIAMYSGPATTRLTDEDCAENGFHW 144 Query: 62 MFDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVLGSVRHPLN 121 MFDTYS A+GAAAALT+ G+KSW+FVTVDYAFGHSLEKDASD+VKANGGTVLGSVRHPLN Sbjct: 145 MFDTYSSASGAAAALTRNGDKSWFFVTVDYAFGHSLEKDASDMVKANGGTVLGSVRHPLN 204 Query: 122 ASDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVG-GKD-QRLVALLVFLSDVH 179 ASDFSSF+LQAQ SKAQVIGLA+G D VNAIK AR F +G GK Q++ +LL+FL+DVH Sbjct: 205 ASDFSSFILQAQNSKAQVIGLANGAQDTVNAIKAAREFGIGTGKSGQKVASLLMFLTDVH 264 Query: 180 ALGLDAAQGLVYTDGFYWDYDEQTRGFS 207 +LGL AQGL++++GFYWD D++TR FS Sbjct: 265 SLGLKQAQGLMFSEGFYWDMDDKTRAFS 292 >E5UEZ0.1 E5UEZ0_ALCXX ABC transporter Length = 405 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/205 (68%), Positives = 165/205 (80%) Query: 3 RAREWLDRDKVEAIADLTNSSVALAVQKLIKEKGGIAMYSGPATGALTTAECASNGFHWM 62 +AREW DRD V AIADLTNS+VALAVQ + +EK + M+SGPAT ALT EC+ GFHWM Sbjct: 88 KAREWFDRDGVTAIADLTNSAVALAVQGIAREKNKVVMFSGPATTALTNKECSPVGFHWM 147 Query: 63 FDTYSQAAGAAAALTKLGNKSWYFVTVDYAFGHSLEKDASDVVKANGGTVLGSVRHPLNA 122 FDTYSQ+AG A A + G KSWYF+TVDYAFGHSLE D + VKA GGTV GSVRHPLNA Sbjct: 148 FDTYSQSAGGAKATVRAGGKSWYFITVDYAFGHSLEADTAKAVKALGGTVAGSVRHPLNA 207 Query: 123 SDFSSFLLQAQASKAQVIGLADGGTDVVNAIKQARSFAVGGKDQRLVALLVFLSDVHALG 182 DF+S+LLQAQ+SKAQV+ LA+GG D VNA+KQAR F + QRLV+LL+FLSD+ ALG Sbjct: 208 PDFASYLLQAQSSKAQVVALANGGQDTVNAVKQAREFGIVAGGQRLVSLLIFLSDLRALG 267 Query: 183 LDAAQGLVYTDGFYWDYDEQTRGFS 207 L++AQGL Y DGFYWDYD+ TR +S Sbjct: 268 LESAQGLSYVDGFYWDYDDATRQWS 292