BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0046.p         (85 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VXB6.1 F1VXB6_9BURK Branched-chain amino acid transport protein     142   1e-32
A8F6A1.1 A8F6A1_THELT Inner-membrane translocator                      92   3e-17
E3HI01.1 E3HI01_ACHXA Inner-membrane translocator 40                   91   5e-17
E5UBV4.1 E5UBV4_ALCXX Putative uncharacterized protein                 91   5e-17
Q4FMW3.1 Q4FMW3_PELUB Branched-chain amino acid transport protein      90   1e-16

>F1VXB6.1 F1VXB6_9BURK Branched-chain amino acid transport protein
          Length = 287

 Score =  142 bits (358), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/81 (90%), Positives = 78/81 (96%)

Query: 5   LLSTFFPIFPEVGANFILIAFVVVNLGGFGSVVGALIAGVLVGVIEVMGGLFLGPQYKMA 64
           LLSTFFPIFP+VGANFILIAFVVVNLGGFGS+VGAL+AG+LVGVIEVMGG  LGPQYK+A
Sbjct: 207 LLSTFFPIFPDVGANFILIAFVVVNLGGFGSIVGALVAGILVGVIEVMGGFLLGPQYKLA 266

Query: 65  IVLVLFLTVLMFRPQGLMGKA 85
           IVLVLFL VLMFRPQGLMGKA
Sbjct: 267 IVLVLFLAVLMFRPQGLMGKA 287


>A8F6A1.1 A8F6A1_THELT Inner-membrane translocator
          Length = 284

 Score = 91.7 bits (226), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 45/83 (54%), Positives = 62/83 (74%)

Query: 1   VAGALLSTFFPIFPEVGANFILIAFVVVNLGGFGSVVGALIAGVLVGVIEVMGGLFLGPQ 60
           VAG LLS  FP++PE GA + L+AFV+V LGGFG++ GA  AG+L+G+ E +GG + G Q
Sbjct: 201 VAGTLLSGIFPVYPESGAMYGLLAFVIVALGGFGNIWGAFYAGILIGLAEALGGFYFGTQ 260

Query: 61  YKMAIVLVLFLTVLMFRPQGLMG 83
           +K AI  +++L VL FRP+GL G
Sbjct: 261 FKYAIAFLIYLLVLQFRPKGLFG 283


>E3HI01.1 E3HI01_ACHXA Inner-membrane translocator 40
          Length = 283

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/83 (56%), Positives = 61/83 (73%)

Query: 2   AGALLSTFFPIFPEVGANFILIAFVVVNLGGFGSVVGALIAGVLVGVIEVMGGLFLGPQY 61
           AGALL+TFF +FP VG  F L+AFV V +GGFGS+ GA IAG+L+G+IE M G F+ P  
Sbjct: 200 AGALLTTFFYVFPSVGTVFGLLAFVAVCMGGFGSLPGAFIAGILIGIIEAMTGYFVAPAL 259

Query: 62  KMAIVLVLFLTVLMFRPQGLMGK 84
           K   V +LF+ VL +RP+GL G+
Sbjct: 260 KTVSVFILFILVLWYRPRGLFGR 282


>E5UBV4.1 E5UBV4_ALCXX Putative uncharacterized protein
          Length = 283

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 62/84 (73%)

Query: 1   VAGALLSTFFPIFPEVGANFILIAFVVVNLGGFGSVVGALIAGVLVGVIEVMGGLFLGPQ 60
           +AGALL+TFF +FP VG  F L+AFV V +GGFGS+ GA IAG+L+G+IE M G F+ P 
Sbjct: 199 LAGALLTTFFYVFPSVGTVFGLLAFVAVCMGGFGSLPGAFIAGILIGIIEAMTGYFVAPA 258

Query: 61  YKMAIVLVLFLTVLMFRPQGLMGK 84
            K   V +LF+ VL +RP+GL G+
Sbjct: 259 LKTVSVFILFILVLWYRPRGLFGR 282


>Q4FMW3.1 Q4FMW3_PELUB Branched-chain amino acid transport protein
          Length = 279

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 63/84 (75%)

Query: 1   VAGALLSTFFPIFPEVGANFILIAFVVVNLGGFGSVVGALIAGVLVGVIEVMGGLFLGPQ 60
           VAG +++ +F IF +VG NF L AFV V LGGFGS++G L AG+++G++E +GGL + P 
Sbjct: 195 VAGGMMANYFFIFTDVGINFALFAFVAVALGGFGSIIGCLYAGIIIGLVESLGGLLIDPS 254

Query: 61  YKMAIVLVLFLTVLMFRPQGLMGK 84
           +K+  V  ++L V++FRPQGL G+
Sbjct: 255 FKLLYVFAIYLLVVIFRPQGLFGR 278