BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0043.p         (236 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

F1VXB4.1 F1VXB4_9BURK Branched-chain amino acid transport ATP-bi...   197   1e-48
A8HRQ0.1 A8HRQ0_AZOC5 Amino acid ABC transporter ATP-binding pro...   118   8e-25
A7NLJ1.1 A7NLJ1_ROSCS ABC transporter related                         113   2e-23
D4GRN9.1 D4GRN9_HALVD ABC-type transport system ATP-binding prot...   113   3e-23
A5D539.1 A5D539_PELTS ABC-type branched-chain amino acid transpo...   112   5e-23

>F1VXB4.1 F1VXB4_9BURK Branched-chain amino acid transport ATP-binding
           protein livG
          Length = 237

 Score =  197 bits (500), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/118 (78%), Positives = 103/118 (87%)

Query: 31  PNGAGKTTMFNCIAGYSPPTTGDIWLEDLKISGMSPEQCARIGIGRTFQVARTFTSMTAL 90
           PNGAGKTTMFNCIAGY PPT+G+I+L D KISG+SPEQCA  GI RTFQVARTFTSM+A 
Sbjct: 37  PNGAGKTTMFNCIAGYFPPTSGEIYLNDEKISGLSPEQCALAGIARTFQVARTFTSMSAQ 96

Query: 91  ENVMVGAFLNERGVGPARRTAQELLDFVNLGRFADKPAGSMTISEQRRLAVARARAVG 148
           ENVMVGAFL  + VG AR+ A +LL+FVNLG+F DKPAGSMTISEQRRLAVARA AVG
Sbjct: 97  ENVMVGAFLKNKHVGAARQVANDLLEFVNLGKFKDKPAGSMTISEQRRLAVARALAVG 154


>A8HRQ0.1 A8HRQ0_AZOC5 Amino acid ABC transporter ATP-binding protein
          Length = 243

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 80/117 (68%), Gaps = 2/117 (1%)

Query: 31  PNGAGKTTMFNCIAGYSPPTTGDIWLEDLKISGMS-PEQCARIGIGRTFQVARTFTSMTA 89
           PNGAGK+T+FN IAG  PPT G +W +   ++ +S PE+CAR GIGRTFQV ++F SMT 
Sbjct: 40  PNGAGKSTLFNVIAGLRPPTEGSVWFDGQDVTRLSAPERCAR-GIGRTFQVVKSFDSMTV 98

Query: 90  LENVMVGAFLNERGVGPARRTAQELLDFVNLGRFADKPAGSMTISEQRRLAVARARA 146
            +NV+VGA +       AR+ A+E+L+F  LG  A+  A  +T  E+RRL VARA A
Sbjct: 99  ADNVIVGALVRTSSTKEARKKAEEVLEFAGLGHRAEVFANELTPPEKRRLEVARALA 155


>A7NLJ1.1 A7NLJ1_ROSCS ABC transporter related
          Length = 242

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 80/119 (67%), Gaps = 2/119 (1%)

Query: 31  PNGAGKTTMFNCIAGYSPPTTGDIWLEDLKISGMSPEQCARIGIGRTFQVARTFTSMTAL 90
           PNG+GK+T+F+ I+G+ PP  G +  E   I+G      AR+GI RTFQ+ R FT MT +
Sbjct: 35  PNGSGKSTLFSVISGFHPPDEGAVIFEGRTITGFPSHAVARLGIARTFQIVRPFTGMTVI 94

Query: 91  ENVMVGAFL--NERGVGPARRTAQELLDFVNLGRFADKPAGSMTISEQRRLAVARARAV 147
           ENV VGA     ER V  A R A+EL++FV L + AD PA ++T++E++RL +ARA ++
Sbjct: 95  ENVRVGALYGRGERSVATADRRARELVEFVGLRQRADVPARNLTLAEKKRLEIARALSI 153


>D4GRN9.1 D4GRN9_HALVD ABC-type transport system ATP-binding protein
           (Probable substrate branched-chain amino acids)
          Length = 263

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/114 (48%), Positives = 75/114 (65%)

Query: 31  PNGAGKTTMFNCIAGYSPPTTGDIWLEDLKISGMSPEQCARIGIGRTFQVARTFTSMTAL 90
           PNGAGKTT+FNCI+G  PPT+G + L+   ISG+   + AR G+ RTFQ+ R    +T +
Sbjct: 59  PNGAGKTTLFNCISGAFPPTSGTVRLDGEVISGLPAHKIARAGLARTFQITRPLEELTVV 118

Query: 91  ENVMVGAFLNERGVGPARRTAQELLDFVNLGRFADKPAGSMTISEQRRLAVARA 144
           EN MVGA ++ R    AR  A E L+FV L   A++ AG +T+  Q+RL +ARA
Sbjct: 119 ENAMVGAHIHTRRRSEAREIAMENLEFVGLADKAEEEAGELTVGAQKRLELARA 172


>A5D539.1 A5D539_PELTS ABC-type branched-chain amino acid transport systems,
           ATPase component
          Length = 239

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 76/118 (64%)

Query: 31  PNGAGKTTMFNCIAGYSPPTTGDIWLEDLKISGMSPEQCARIGIGRTFQVARTFTSMTAL 90
           PNG+GKTT+FN I+ + P T G+I+ +  +I  +   +   IGIGRTFQV +    MT L
Sbjct: 37  PNGSGKTTVFNLISRFFPLTAGEIYFKGKRIDQLPAHKICEIGIGRTFQVVKPLRRMTVL 96

Query: 91  ENVMVGAFLNERGVGPARRTAQELLDFVNLGRFADKPAGSMTISEQRRLAVARARAVG 148
           ENVM GAFL    +G AR  A+E++DF  L R+ ++ A S+ I  ++RL +ARA A G
Sbjct: 97  ENVMAGAFLRTNSMGRARHRAEEIIDFCGLTRYKEREAKSLPIPLRKRLEIARALATG 154