BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0022.p         (104 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q5P2R0.1 Q5P2R0_AROAE Probable transmembrane ABC transporter pro...   131   4e-29
C4KCF6.1 C4KCF6_THASP Transport system permease protein               128   2e-28
F1W3T2.1 F1W3T2_9BURK ABC-type Fe3+-siderophore transport system...   127   5e-28
Q478H3.1 Q478H3_DECAR Transport system permease protein               126   1e-27
Q0A4S6.1 Q0A4S6_ALHEH Transport system permease protein               125   2e-27

>Q5P2R0.1 Q5P2R0_AROAE Probable transmembrane ABC transporter protein,
           permease
          Length = 326

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 84/101 (83%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V RLR      ASL TAAAVTL G++GFVGL+VPH +R ++GNDQRVLLPAA LAG
Sbjct: 224 LGVRVERLRYLLYVLASLLTAAAVTLIGSVGFVGLIVPHLVRFVIGNDQRVLLPAAMLAG 283

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G  LTLAD AARTV+APMQLPVGV+TALIGVP+FL+LL+R 
Sbjct: 284 GTLLTLADTAARTVIAPMQLPVGVLTALIGVPVFLFLLSRH 324


>C4KCF6.1 C4KCF6_THASP Transport system permease protein
          Length = 343

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/101 (73%), Positives = 85/101 (84%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V  LRVA    ASL TA AVTL G++GFVGLVVPH +RL +GNDQRVL+PAAALAG
Sbjct: 238 LGVRVGHLRVALYVLASLLTATAVTLVGSVGFVGLVVPHLVRLALGNDQRVLIPAAALAG 297

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G  LTLAD AARTV+AP QLPVGV+TALIGVP+FL+LL+R+
Sbjct: 298 GTLLTLADTAARTVMAPQQLPVGVLTALIGVPVFLFLLSRN 338


>F1W3T2.1 F1W3T2_9BURK ABC-type Fe3+-siderophore transport system permease
           component
          Length = 322

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/104 (76%), Positives = 88/104 (84%)

Query: 1   LLGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALA 60
           LLGVPV+RLR  TL  AS+ATAAAV +AGTIGFVGLVVPH LRLL GNDQR+LLPA AL 
Sbjct: 219 LLGVPVLRLRALTLLVASVATAAAVAVAGTIGFVGLVVPHALRLLFGNDQRLLLPACALG 278

Query: 61  GGAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSRA 104
           GG  L LADL ART+VAP QLPVGVITAL+GVP+FL+LL R RA
Sbjct: 279 GGIALVLADLLARTIVAPTQLPVGVITALVGVPVFLFLLQRGRA 322


>Q478H3.1 Q478H3_DECAR Transport system permease protein
          Length = 325

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 83/101 (82%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V RLR A    ASLATAA+VT AG+IGFVGLVVPH +RL  GNDQR+LLPA+ LAG
Sbjct: 223 LGVAVGRLRYAIYLLASLATAASVTTAGSIGFVGLVVPHLVRLATGNDQRLLLPASVLAG 282

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G+ L LAD  ART++AP QLPVGV+TALIGVP+FL+LL+R 
Sbjct: 283 GSLLVLADTLARTLIAPQQLPVGVLTALIGVPVFLFLLSRQ 323


>Q0A4S6.1 Q0A4S6_ALHEH Transport system permease protein
          Length = 322

 Score =  125 bits (314), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 84/102 (82%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V  L      AASL TA AVT+AG++GFVGL+VPH LRL++GNDQR++LPA+ALAG
Sbjct: 221 LGVRVRPLEWTVYLAASLLTATAVTVAGSVGFVGLIVPHMLRLVLGNDQRIILPASALAG 280

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSR 103
           G  LTLAD  ART++AP QLPVGVITA++GVP+FL+LL RSR
Sbjct: 281 GILLTLADTLARTLIAPEQLPVGVITAMLGVPVFLYLLHRSR 322