BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0014.p (248 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0M5.1 D8J0M5_HERSS Cys regulon transcription regulator protein 480 e-133 A6T0U3.1 A6T0U3_JANMA Cys regulon transcriptionnal regulator pro... 444 e-123 A4G7N4.1 A4G7N4_HERAR HTH-type transcriptional regulator cysB (C... 434 e-120 F1VWS5.1 F1VWS5_9BURK Regulatory protein CysB 432 e-119 B3R653.1 B3R653_CUPTR Transcriptional regulator of biosynthesis ... 370 e-100 >D8J0M5.1 D8J0M5_HERSS Cys regulon transcription regulator protein Length = 313 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 230/248 (92%), Positives = 242/248 (97%) Query: 1 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYPKVRLS 60 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARY+LPKVVQAFTQKYPKV LS Sbjct: 66 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQKYPKVHLS 125 Query: 61 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVMVVPPEHPLLKSKNLS 120 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHV+VVPP+HPLL+SK+L+ Sbjct: 126 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVVVVPPDHPLLQSKSLT 185 Query: 121 LEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGVGIIAG 180 LEEIA PLITYD+AFSGRSKIDHAFSLR LKPD+VLEAIDADVIKTYVELGMGVGIIAG Sbjct: 186 LEEIAANPLITYDSAFSGRSKIDHAFSLRQLKPDVVLEAIDADVIKTYVELGMGVGIIAG 245 Query: 181 MAFDADRDRGLRSLPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLIGQVME 240 +AFDA+RDRGLR++PAGHLFGTNVSRVALKQGAYLR YVYTFIELLAPTLNRKLI QVME Sbjct: 246 IAFDAERDRGLRAIPAGHLFGTNVSRVALKQGAYLRGYVYTFIELLAPTLNRKLIAQVME 305 Query: 241 GEKDMYEL 248 GEKDMYEL Sbjct: 306 GEKDMYEL 313 >A6T0U3.1 A6T0U3_JANMA Cys regulon transcriptionnal regulator protein Length = 313 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 206/248 (83%), Positives = 235/248 (94%) Query: 1 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYPKVRLS 60 VL+SVELIMQE+DGLKRIG EFAAHDSGSFTIATTHTQARYSLPKVVQAFTQK+PKVRLS Sbjct: 66 VLKSVELIMQEIDGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFPKVRLS 125 Query: 61 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVMVVPPEHPLLKSKNLS 120 LLQGNPKQ+ +MV DQAD+AIATE++AS EGL+SLPCYQWEH +VVP +HPLLKSK+++ Sbjct: 126 LLQGNPKQVADMVLMDQADLAIATESIASIEGLISLPCYQWEHQVVVPVDHPLLKSKSIT 185 Query: 121 LEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGVGIIAG 180 LEE+ YPLITYD+AF+GR+KIDHAF+LR+LKPDI+LEAIDADVIKTYVELGMG+GIIAG Sbjct: 186 LEELTAYPLITYDSAFAGRNKIDHAFALRNLKPDILLEAIDADVIKTYVELGMGIGIIAG 245 Query: 181 MAFDADRDRGLRSLPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLIGQVME 240 MAFDA+RD+ LR++PAGHLFGTNVSRVALKQGAYLRSYV+TFIELL PTLNRKL+ QV+ Sbjct: 246 MAFDAERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLVEQVLN 305 Query: 241 GEKDMYEL 248 GEKDMYEL Sbjct: 306 GEKDMYEL 313 >A4G7N4.1 A4G7N4_HERAR HTH-type transcriptional regulator cysB (Cys regulon transcriptional activator) Length = 313 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 201/248 (81%), Positives = 233/248 (93%) Query: 1 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYPKVRLS 60 VL+SVE IM E++GLKRIG EFAAHDSGSFTIATTHTQARYSLPKVVQAFTQK+PKVRLS Sbjct: 66 VLKSVEAIMLEIEGLKRIGNEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKFPKVRLS 125 Query: 61 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVMVVPPEHPLLKSKNLS 120 LLQGNPKQI EMV DQAD+AIATEA+A+ +GL+SLPCYQWEH +V+P +HPLLKSK+++ Sbjct: 126 LLQGNPKQIAEMVLMDQADLAIATEAIANMDGLISLPCYQWEHQIVLPLDHPLLKSKSIT 185 Query: 121 LEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGVGIIAG 180 LEE+A YP+ITYD+AF+GR+KIDHAF+LR+LKPDI+LEAIDADVIKTYVELGMG+GIIAG Sbjct: 186 LEELAAYPIITYDSAFAGRNKIDHAFNLRNLKPDILLEAIDADVIKTYVELGMGIGIIAG 245 Query: 181 MAFDADRDRGLRSLPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLIGQVME 240 MAFD +RD+ LR++PAGHLFGTNVSRVALKQGAYLRSYV+TFIELL PTLNRKL+ QV+ Sbjct: 246 MAFDTERDKNLRAIPAGHLFGTNVSRVALKQGAYLRSYVFTFIELLTPTLNRKLVEQVLS 305 Query: 241 GEKDMYEL 248 G+KDMYEL Sbjct: 306 GDKDMYEL 313 >F1VWS5.1 F1VWS5_9BURK Regulatory protein CysB Length = 313 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 200/248 (80%), Positives = 231/248 (93%) Query: 1 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYPKVRLS 60 VL++VE+IMQE+D LK IGKEFAAHDSGSFTIATTHTQARY+LPKVVQAFTQ++PKVRLS Sbjct: 66 VLKAVEVIMQEIDSLKSIGKEFAAHDSGSFTIATTHTQARYALPKVVQAFTQRFPKVRLS 125 Query: 61 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVMVVPPEHPLLKSKNLS 120 LLQGNPKQ+ ++V + ADIA+ATE++ + GLVS+PCYQWEHV+VVPPEHPLLKSK+L+ Sbjct: 126 LLQGNPKQVADLVLSGHADIALATESITTVAGLVSIPCYQWEHVVVVPPEHPLLKSKSLT 185 Query: 121 LEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGVGIIAG 180 L+EIA YPLITYD+AF+GR+KIDHAF LR+LKPD++LEAIDADVIKTYVELG+GVGIIAG Sbjct: 186 LDEIAAYPLITYDSAFTGRAKIDHAFQLRNLKPDVLLEAIDADVIKTYVELGLGVGIIAG 245 Query: 181 MAFDADRDRGLRSLPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLIGQVME 240 MA+DADRD+ LR + AGHLFGTNVSRVALKQGAYLRSYVYTFIELL PTLNRKLI QVM Sbjct: 246 MAYDADRDKNLRMISAGHLFGTNVSRVALKQGAYLRSYVYTFIELLTPTLNRKLIEQVMS 305 Query: 241 GEKDMYEL 248 GEK+MYEL Sbjct: 306 GEKEMYEL 313 >B3R653.1 B3R653_CUPTR Transcriptional regulator of biosynthesis of L-cysteine and regulator of sulfur assimilation (LysR family) Length = 313 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 168/248 (67%), Positives = 212/248 (85%) Query: 1 VLRSVELIMQEVDGLKRIGKEFAAHDSGSFTIATTHTQARYSLPKVVQAFTQKYPKVRLS 60 +L SVE I+QEV+ LKR+G ++AA D G+FTIATTHTQARY+LP+V+ FT++YPKVRLS Sbjct: 66 ILSSVEKILQEVESLKRVGMDYAAQDQGNFTIATTHTQARYALPRVISEFTKRYPKVRLS 125 Query: 61 LLQGNPKQITEMVRNDQADIAIATEALASGEGLVSLPCYQWEHVMVVPPEHPLLKSKNLS 120 + QGNP QI +M+ +DQADI IATE ++S + LVSLP YQW H+++ PPEHPLL K+L+ Sbjct: 126 IQQGNPAQIADMLLHDQADIGIATEGISSDKNLVSLPGYQWTHMVITPPEHPLLDKKHLA 185 Query: 121 LEEIAGYPLITYDAAFSGRSKIDHAFSLRDLKPDIVLEAIDADVIKTYVELGMGVGIIAG 180 LE++ GYPLITYDA F+GR+KID AF+LR L PDIVLEAIDADVIKTYVE+G+GVGI+AG Sbjct: 186 LEDLMGYPLITYDANFAGRTKIDKAFALRHLAPDIVLEAIDADVIKTYVEIGLGVGIVAG 245 Query: 181 MAFDADRDRGLRSLPAGHLFGTNVSRVALKQGAYLRSYVYTFIELLAPTLNRKLIGQVME 240 +A+DA+RDR LR + AGHLFG+NV+ +A+KQGAYLRS+VYTFIEL +PTLNRKL+ Q M Sbjct: 246 VAYDAERDRNLRGIAAGHLFGSNVTHLAVKQGAYLRSFVYTFIELFSPTLNRKLVEQAMS 305 Query: 241 GEKDMYEL 248 GE + YEL Sbjct: 306 GEHEAYEL 313