BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0012.p (257 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0M6.1 D8J0M6_HERSS Permease transmembrane protein 422 e-116 B0LFT2.1 B0LFT2_9BACT Permease 368 e-100 A6T0U4.1 A6T0U4_JANMA Uncharacterized conserved protein 356 2e-96 A4G7N5.1 A4G7N5_HERAR Putative permease 355 3e-96 F1VWS4.1 F1VWS4_9BURK Putative uncharacterized protein 346 1e-93 >D8J0M6.1 D8J0M6_HERSS Permease transmembrane protein Length = 257 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/257 (89%), Positives = 244/257 (94%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 MTVSYVVSGFAVG+LVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGT A Sbjct: 1 MTVSYVVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTLA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HRFKGTVRWD+VRRL YGALPAA++TTLLLKHFGAVSDGI+L IRYSIA+SVFLTVIALL Sbjct: 61 HRFKGTVRWDVVRRLSYGALPAALITTLLLKHFGAVSDGIALTIRYSIAVSVFLTVIALL 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F+S++Q WLNAHP+RQLQG LA ATI AGA+LG LVTISSIGAGAVGATLLVLLYPRLS Sbjct: 121 FRSRMQAWLNAHPQRQLQGATLANATIAAGALLGTLVTISSIGAGAVGATLLVLLYPRLS 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI+W LL LLLGSVPGITIGSLAARAVPEKFL Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSINWELLATLLLGSVPGITIGSLAARAVPEKFL 240 Query: 241 RGLLAITLTSVALKLIW 257 RGLLAITLTSVA+KLIW Sbjct: 241 RGLLAITLTSVAVKLIW 257 >B0LFT2.1 B0LFT2_9BACT Permease Length = 257 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/257 (73%), Positives = 218/257 (84%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M ++Y+VSGFAVG+LVG+TGVGGGSLMTPLLTL+FG+ PSVAVGTDLAFAS TK+AG F Sbjct: 1 MLITYIVSGFAVGLLVGMTGVGGGSLMTPLLTLIFGVPPSVAVGTDLAFASITKSAGAFT 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR +GTVRWDIV+ LC GALPAA+ T L LK +GA+ I IRYSIA SV LTV+AL+ Sbjct: 61 HRLRGTVRWDIVKLLCIGALPAAVATALALKQYGALDASIGQFIRYSIAGSVLLTVVALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 FK K+ WLNAHPERQLQG L AT+ AG LG LVTISSIGAGA+GATLLV+LYPRLS Sbjct: 121 FKGKMLAWLNAHPERQLQGRALDAATVFAGLGLGVLVTISSIGAGAIGATLLVMLYPRLS 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 AEVAGTDIAYAVPLTAIAAFGHWWLGSI+W+LL LL+GS+PGIT+GS A++VPEKFL Sbjct: 181 AAEVAGTDIAYAVPLTAIAAFGHWWLGSINWTLLAMLLVGSLPGITLGSWIAKSVPEKFL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA+TLT VA KLI+ Sbjct: 241 RVLLAMTLTGVAAKLIY 257 >A6T0U4.1 A6T0U4_JANMA Uncharacterized conserved protein Length = 257 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 191/257 (74%), Positives = 226/257 (87%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M+V+Y+VSGFAVG+LVGLTGVGGGSLMTPLLTLLFG+ P+VAVGTDLAFAS TK AGTFA Sbjct: 1 MSVTYIVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGVSPTVAVGTDLAFASTTKIAGTFA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR+KG V W+IV++LC GALPAA++TTL+LK+ G + I VIRYSIA SV LTVIAL+ Sbjct: 61 HRYKGNVHWNIVKQLCIGALPAAVLTTLVLKYLGGLDKEIGQVIRYSIAGSVMLTVIALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F+++LQ+W++AHP RQ G KL ATI++GA+LG LVTISSIGAGA+GAT+LVLLYPRL+ Sbjct: 121 FRTRLQNWMSAHPNRQFHGKKLVTATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLT 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI W LL LLLGSVPGIT+GSLA+RA+PEK L Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSIHWELLAMLLLGSVPGITLGSLASRAIPEKVL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA TLT+VA KL++ Sbjct: 241 RVLLATTLTTVAFKLVY 257 >A4G7N5.1 A4G7N5_HERAR Putative permease Length = 257 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 191/257 (74%), Positives = 225/257 (87%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M+VSY+VSGFAVG+LVGLTGVGGGSLMTPLLTLLFG+ P+VAVGTDLAFASATK AGTFA Sbjct: 1 MSVSYIVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGVSPTVAVGTDLAFASATKVAGTFA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR++G V W IV+ LC GALPAA++TTL LK+FG + I +IRYSIA SV LTVIAL+ Sbjct: 61 HRYRGNVHWHIVKHLCLGALPAAVLTTLTLKYFGVLDQEIGQIIRYSIAGSVMLTVIALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F++++Q W+NAHP RQ+QG KL ATI++GA+LG LVTISSIGAGA+GAT+LVLLYPRL+ Sbjct: 121 FRTRMQHWMNAHPGRQIQGEKLVVATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLT 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI+W LL LLLGSVPGIT+GSL AR +PEK L Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSINWELLAMLLLGSVPGITLGSLVARTIPEKVL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA LT+VA+KL++ Sbjct: 241 RVLLASVLTTVAVKLVY 257 >F1VWS4.1 F1VWS4_9BURK Putative uncharacterized protein Length = 246 Score = 346 bits (888), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/231 (74%), Positives = 202/231 (87%) Query: 27 MTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFAHRFKGTVRWDIVRRLCYGALPAAIVT 86 MTPLLTLLFGI P+VAVGTDLAFASATK AGTFAHRF+G V W+IVRRLC GALPAA+ Sbjct: 16 MTPLLTLLFGISPTVAVGTDLAFASATKVAGTFAHRFRGNVHWEIVRRLCLGALPAAVAA 75 Query: 87 TLLLKHFGAVSDGISLVIRYSIAISVFLTVIALLFKSKLQDWLNAHPERQLQGLKLARAT 146 TL+LK+FG + + I +IRYSIA SV LTVIA+LF++++Q W+ AHP+ QL+G + A AT Sbjct: 76 TLVLKYFGGLDESIGQIIRYSIAGSVMLTVIAILFRTRMQRWMAAHPQYQLEGSRQANAT 135 Query: 147 ILAGAVLGALVTISSIGAGAVGATLLVLLYPRLSPAEVAGTDIAYAVPLTAIAAFGHWWL 206 I+AG VLG LVTISSIGAGAVGATLLVLLYP+L PAE+AGTDIAYAVPLTAIAA GHWW+ Sbjct: 136 IMAGVVLGTLVTISSIGAGAVGATLLVLLYPKLKPAEIAGTDIAYAVPLTAIAALGHWWI 195 Query: 207 GSIDWSLLGALLLGSVPGITIGSLAARAVPEKFLRGLLAITLTSVALKLIW 257 GSI+W+LL LL+GSVPGITIGSLAARAVP+K LRGLLA+TLT VA KL++ Sbjct: 196 GSINWALLIMLLIGSVPGITIGSLAARAVPDKLLRGLLAVTLTGVAFKLVF 246