BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0004.p         (123 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8J0N3.1 D8J0N3_HERSS Non-chaperonin molecular chaperone ATPase ...   212   1e-53
Q1GTT3.1 Q1GTT3_SPHAL Secretion chaperone CsaA                        197   3e-49
E0LFJ8.1 E0LFJ8_SPHCR Export-related chaperone CsaA                   190   7e-47
F1ZA17.1 F1ZA17_9SPHN Secretion chaperone CsaA protein                184   4e-45
A4YSF3.1 A4YSF3_BRASO Secretion chaperone CsaA protein                184   5e-45

>D8J0N3.1 D8J0N3_HERSS Non-chaperonin molecular chaperone ATPase protein
           EC=3.6.4.10
          Length = 123

 Score =  212 bits (540), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 102/123 (82%), Positives = 111/123 (90%)

Query: 1   MHLLHDPGAPAAAPITFDDFLKVDIRIGTIISAEAFPEARKPAYKLKIDLGPTIGIKQSS 60
           MHLLHDP AP AA I FD FLKVDIR+GTI+SAEAFPEARKPA+KLKID GP IG++QSS
Sbjct: 1   MHLLHDPAAPPAASIDFDSFLKVDIRVGTILSAEAFPEARKPAFKLKIDFGPAIGVRQSS 60

Query: 61  AQITALYRLDELVGKQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFAPDRATPNGG 120
           AQIT  Y LD+LVG+QVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLF+PD+A PNG 
Sbjct: 61  AQITTHYTLDQLVGRQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFSPDQAVPNGA 120

Query: 121 RLF 123
           RLF
Sbjct: 121 RLF 123


>Q1GTT3.1 Q1GTT3_SPHAL Secretion chaperone CsaA
          Length = 123

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 95/123 (77%), Positives = 107/123 (86%)

Query: 1   MHLLHDPGAPAAAPITFDDFLKVDIRIGTIISAEAFPEARKPAYKLKIDLGPTIGIKQSS 60
           MHL HD  APAA PI+FDDFL+VDIRIGTI+ A  FPEARKPA+KLKID GPTIG+K+SS
Sbjct: 1   MHLNHDTDAPAADPISFDDFLRVDIRIGTIVEAAPFPEARKPAFKLKIDFGPTIGVKKSS 60

Query: 61  AQITALYRLDELVGKQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFAPDRATPNGG 120
           AQI   Y L+ELVG+QVAAVVNFPPRQIGKF+SEVLTLGF DA+G V+LFAPDR+ PNG 
Sbjct: 61  AQIVERYMLEELVGRQVAAVVNFPPRQIGKFLSEVLTLGFADAEGAVILFAPDRSVPNGS 120

Query: 121 RLF 123
           RLF
Sbjct: 121 RLF 123


>E0LFJ8.1 E0LFJ8_SPHCR Export-related chaperone CsaA
          Length = 123

 Score =  190 bits (482), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/123 (75%), Positives = 105/123 (85%)

Query: 1   MHLLHDPGAPAAAPITFDDFLKVDIRIGTIISAEAFPEARKPAYKLKIDLGPTIGIKQSS 60
           MHL HDP +PA  PI+FDDFLKVDIR+GTI+SAEA+PEARKPAYKL ID GP IG K+SS
Sbjct: 1   MHLDHDPASPAGDPISFDDFLKVDIRVGTILSAEAYPEARKPAYKLLIDFGPGIGRKKSS 60

Query: 61  AQITALYRLDELVGKQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFAPDRATPNGG 120
           AQIT  Y L++L G+QVAAVVNFPPRQIGKF+SEVLTLGF D  G V+LFAPDRA P+G 
Sbjct: 61  AQITVNYALEDLPGRQVAAVVNFPPRQIGKFLSEVLTLGFADEAGAVMLFAPDRAVPDGS 120

Query: 121 RLF 123
           RLF
Sbjct: 121 RLF 123


>F1ZA17.1 F1ZA17_9SPHN Secretion chaperone CsaA protein
          Length = 123

 Score =  184 bits (467), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 100/123 (81%)

Query: 1   MHLLHDPGAPAAAPITFDDFLKVDIRIGTIISAEAFPEARKPAYKLKIDLGPTIGIKQSS 60
           MHL HDP A  AAPI FDDFL VDIRIGTI++AE +PEARKP+ KL+ID GP IG K+SS
Sbjct: 1   MHLDHDPSASPAAPIGFDDFLAVDIRIGTIVAAEPYPEARKPSVKLRIDFGPGIGEKKSS 60

Query: 61  AQITALYRLDELVGKQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFAPDRATPNGG 120
           AQI  LY   ELVG+QVAAVVNFPPRQIGKFMSEVLT+GF D  G VVLFAPDR  PNG 
Sbjct: 61  AQIAVLYEPAELVGRQVAAVVNFPPRQIGKFMSEVLTVGFADEDGRVVLFAPDRPVPNGS 120

Query: 121 RLF 123
           RLF
Sbjct: 121 RLF 123


>A4YSF3.1 A4YSF3_BRASO Secretion chaperone CsaA protein
          Length = 123

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 100/123 (81%)

Query: 1   MHLLHDPGAPAAAPITFDDFLKVDIRIGTIISAEAFPEARKPAYKLKIDLGPTIGIKQSS 60
           MH  H+P APAAA I+FD FL VDIR+GTI++AE +PEARKP+ KL ID GP IG ++SS
Sbjct: 1   MHFAHEPTAPAAAQISFDQFLAVDIRVGTIVAAEPYPEARKPSLKLTIDFGPAIGTRRSS 60

Query: 61  AQITALYRLDELVGKQVAAVVNFPPRQIGKFMSEVLTLGFPDAQGEVVLFAPDRATPNGG 120
           AQI ALY    LVG+QVAAVVNFPPRQIGKFMSEVLTLGFPD  G VVLF PD+A PNG 
Sbjct: 61  AQIAALYDPATLVGRQVAAVVNFPPRQIGKFMSEVLTLGFPDEAGNVVLFKPDKAVPNGA 120

Query: 121 RLF 123
           RLF
Sbjct: 121 RLF 123