BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0002.p (377 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0N5.1 D8J0N5_HERSS Permease transmembrane protein 556 e-156 A4G7P3.1 A4G7P3_HERAR Putative permease 475 e-132 A6T0V2.1 A6T0V2_JANMA Uncharacterized conserved protein 466 e-129 C3X6U6.1 C3X6U6_OXAFO Permease YjgP/YjgQ family protein 439 e-121 F1VZI6.1 F1VZI6_9BURK Putative Membrane protein; putative permease 413 e-113 >D8J0N5.1 D8J0N5_HERSS Permease transmembrane protein Length = 376 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 283/378 (74%), Positives = 321/378 (84%), Gaps = 5/378 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 MRV+QRY T+EI RSV FALAAFLALFAFFEMMGQLE VGRNGY+LQ AV YV+MGLPGN Sbjct: 1 MRVIQRYFTSEITRSVLFALAAFLALFAFFEMMGQLEQVGRNGYKLQQAVFYVLMGLPGN 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 VYELMP AVLIGTIY L+Q AA SEFTIMRVSSMST A+ LA+IG+GFA++TI+FGEL Sbjct: 61 VYELMPTAVLIGTIYTLSQLAARSEFTIMRVSSMSTGQAARVLARIGVGFAVLTIVFGEL 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 +APKATE EK+KLQAQG+SLS QFRSG+WAKDVI+ +GLEG+V+G+RF+NI+ +Q DG Sbjct: 121 IAPKATEWAEKLKLQAQGASLSSQFRSGMWAKDVIRDHGLEGNVVGSRFINIRTVQPDGR 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFI--VDKKVSAITAPISTE 238 +EGVK+YELD DFH++ ++ A G Y GNH W LSDV ++ F D+K IT P+ T Sbjct: 181 IEGVKLYELDSDFHMARMVTAKAGMYDGNHQWTLSDVVQSDFTGGSDRK---ITEPVKTV 237 Query: 239 KIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIVYPL 298 K + VSEVTPEILSVLFADPDRMSAYDL AYTKHLEANNQRT+RYEIAFWKKIVYPL Sbjct: 238 KSAQLTLVSEVTPEILSVLFADPDRMSAYDLLAYTKHLEANNQRTDRYEIAFWKKIVYPL 297 Query: 299 SIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVTAAL 358 SIFVM+ LALPFAYLHFR GGVSLKIFTGIMIGV FQLIN+LFSHLGLLNTWPA VTAAL Sbjct: 298 SIFVMLALALPFAYLHFRAGGVSLKIFTGIMIGVCFQLINSLFSHLGLLNTWPAFVTAAL 357 Query: 359 PSTLFMLMALVALRWVER 376 PS LFM +A AL WVER Sbjct: 358 PSLLFMALAAGALWWVER 375 >A4G7P3.1 A4G7P3_HERAR Putative permease Length = 382 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/382 (60%), Positives = 289/382 (75%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQ+Y EI RSV F L AFLALF FF+++ +L+AVG GY++Q+A+L+V++ +PG Sbjct: 1 MKILQKYFAAEIGRSVIFVLIAFLALFGFFDLIAELKAVGHGGYKIQHALLFVLLSMPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 +YELMPIA LIGTI+ L+QFAA SEFTIMR SSMST M L KIGL FAIVT + GE Sbjct: 61 LYELMPIAALIGTIWTLSQFAARSEFTIMRASSMSTGMAGLMLIKIGLVFAIVTFVVGEF 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 V P ++ + EKI+ QG SLSQ+FRSGLW KD+I+SNG +G+ IG+RFLN++ +Q DG Sbjct: 121 VVPASSNMAEKIRTLNQGGSLSQEFRSGLWTKDMIRSNGKDGEAIGSRFLNVRTVQPDGQ 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSA-----ITAPI 235 L +KIYE +++FHL+ LI AA DYQG++ W LS+ + F + + A IT I Sbjct: 181 LTDLKIYEFNRNFHLTALITAARADYQGDNVWLLSNGSQAEFGETELMGAAVATDITTAI 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 ST + +SEVTPEILSV F+DP +MSAYDL YT++L NN+ T RYEIA WKK+V Sbjct: 241 STRNFASKPLISEVTPEILSVGFSDPAKMSAYDLVNYTQYLAENNRETARYEIALWKKVV 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP ++FVMM LALPFAYLHFR+GGVSLKIFTGIMIGVSFQLIN+LFSHLGLLNTWP T Sbjct: 301 YPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFAT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A LPS LF+L A+ AL WVER Sbjct: 361 AILPSLLFLLAAIGALLWVERH 382 >A6T0V2.1 A6T0V2_JANMA Uncharacterized conserved protein Length = 382 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 230/382 (60%), Positives = 290/382 (75%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQ+Y + EI RSV F L AFLALFAFF+++G+L++VG GY++Q+A LYV++ +PG Sbjct: 1 MKILQKYFSLEIGRSVLFVLIAFLALFAFFDLVGELKSVGHGGYKIQHAFLYVVLEMPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 VYELMPIA LIGTI+AL+QFAA SEFTIMR SSMST M L KIG+ FA++T +FGE Sbjct: 61 VYELMPIAALIGTIWALSQFAARSEFTIMRASSMSTAMVGAILLKIGVVFALITFVFGEF 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 V P + + E+I++ +QG +LSQ+FRSGLW KDVI+SNG EG+V+G+RF+N++ ++ DG Sbjct: 121 VVPITSNMAERIRVNSQGGALSQEFRSGLWTKDVIRSNGQEGEVLGSRFVNVRELRPDGK 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDK-----KVSAITAPI 235 L +KIYE +++FHL+ LI A DY G +TW L+D F K + IT I Sbjct: 181 LMNLKIYEFNRNFHLTSLITAGSADYAGANTWTLNDGTVAAFGESKLQGATTATDITTAI 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 ST K KT + VSE+TPEILSV F DP MSA L YT++L NN+ T RYEIA WKK+V Sbjct: 241 STSKFKTQSLVSEMTPEILSVGFTDPATMSAIALVNYTQYLSENNRDTVRYEIALWKKVV 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP ++FVMM LALPFAYLHFR+GGVSLKIFTGIMIGVSFQLIN+LFSHLGLLNTWP T Sbjct: 301 YPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFAT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A LPS LF+ +A+ AL WVER Sbjct: 361 AILPSLLFLTVAVGALMWVERH 382 >C3X6U6.1 C3X6U6_OXAFO Permease YjgP/YjgQ family protein Length = 382 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 205/382 (53%), Positives = 277/382 (72%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQRY ++IV+SV F L AFL LFAFF+++ +L +VGR GYQL + +Y+++G PG Sbjct: 1 MKILQRYFFSQIVKSVVFILVAFLGLFAFFDLISELSSVGRGGYQLHHVFVYILLGFPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 +YELMP AVLIGTIYA+A FA++SEFTIMRVSS+STR LAK+GL F + T L GE+ Sbjct: 61 IYELMPFAVLIGTIYAMALFASNSEFTIMRVSSLSTRDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 + P + + + + G +LS +FR+G+W+KD I+ NG EG++IG+RF+NI+ ++ DG Sbjct: 121 LTPYTSRMASEFRNNLIGRNLSDKFRTGMWSKDTIRENGREGEIIGSRFMNIKTMRPDGT 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSAITAP-----I 235 +E +K+YE +++ L + A +G Y GNH WQL+ V ++ K P + Sbjct: 181 IEQIKLYEFNRELELVKTVTAQNGHYLGNHEWQLNGVVESLIKSSGKSKGKRFPDSAPVV 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 TEK ++ VS+VTP+ILSV+ D ++MSAY+L Y +HL N Q Y+IAFWKKI+ Sbjct: 241 DTEKRDSIRLVSDVTPDILSVISVDANKMSAYELAVYNRHLVENKQDATSYQIAFWKKII 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP S+FVMM LALPFAYLHFR+GGVSLKIFTGIMIGV+F LINNLFSH+GLLNTWP +T Sbjct: 301 YPFSVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVAFILINNLFSHVGLLNTWPPFLT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A +PS LF+L A+ AL WVER Sbjct: 361 AVIPSVLFLLSAVFALWWVERH 382 >F1VZI6.1 F1VZI6_9BURK Putative Membrane protein; putative permease Length = 378 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 220/381 (57%), Positives = 280/381 (73%), Gaps = 7/381 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M VLQ+Y EI+R+V F L AFLALFAFF+++ +L AVGR GY++Q+A LY+ +GLPG Sbjct: 1 MTVLQKYFGKEILRAVLFVLLAFLALFAFFDLINELPAVGRGGYKIQHAFLYIALGLPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 YELMPIA LIG+IY LAQ A++SEFTIMRVS +STR LAKIGL F ++T LFGE+ Sbjct: 61 TYELMPIAALIGSIYVLAQMASNSEFTIMRVSGLSTRQAGFMLAKIGLIFVLITFLFGEV 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 ++P E E++K QAQG++ S++FRSGLW KD I+ G +IG+RF+N+ + +G Sbjct: 121 ISPLTAERAERLKQQAQGTT-SKEFRSGLWTKDQIRDG--SGAMIGSRFVNVGELLPNGQ 177 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSAI--TAP--IS 236 L+ VK+YE D + L+ ++ A+ D+QG+ W LSDV T F + A+ AP I+ Sbjct: 178 LKDVKLYEFDSELRLTSMVTASTADFQGDRRWLLSDVATTRFALTVFNLAVLPDAPSGIA 237 Query: 237 TEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIVY 296 T T +S++TP+ILSV FADPDRMSA DL YT+HL N Q TERY+IAFWKKI+Y Sbjct: 238 TTTAPTRELISDITPDILSVTFADPDRMSALDLATYTRHLAENRQVTERYDIAFWKKIIY 297 Query: 297 PLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVTA 356 P ++FVMM LALPFAYLH R+GGVSLKIF GIMIGVSF+LIN+LFSH+GLLNTWP L TA Sbjct: 298 PFAVFVMMALALPFAYLHARSGGVSLKIFMGIMIGVSFKLINSLFSHIGLLNTWPPLATA 357 Query: 357 ALPSTLFMLMALVALRWVERR 377 PS LF+ AL AL WVER Sbjct: 358 IAPSLLFLAGALGALWWVERH 378