BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0046.p         (128 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

E6V3D5.1 E6V3D5_VARPD ABC transporter related protein                 166   7e-40
D0J7S6.1 D0J7S6_COMT2 ATP-binding protein BioM                        145   2e-33
D8DCB5.1 D8DCB5_COMTE ATP-binding protein BioM                        144   3e-33
A9C3B7.1 A9C3B7_DELAS ABC transporter related                         142   2e-32
B7WWU1.1 B7WWU1_COMTE ABC transporter related                         141   3e-32

>E6V3D5.1 E6V3D5_VARPD ABC transporter related protein
          Length = 259

 Score =  166 bits (421), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 77/106 (72%), Positives = 95/106 (89%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WAGRA+GELSQGQRQQVCL+ALQI  PATLLLDEP+++LDL SQ RL+AQ+ AT QQ
Sbjct: 145 LAAWAGRAIGELSQGQRQQVCLLALQIGQPATLLLDEPFASLDLLSQARLAAQLEATGQQ 204

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERA 106
           I++STHLL+HV DFERVLWL+QG++RADGPGR++C AYA++V +RA
Sbjct: 205 IVVSTHLLEHVYDFERVLWLEQGRVRADGPGREVCEAYAENVRQRA 250


>D0J7S6.1 D0J7S6_COMT2 ATP-binding protein BioM
          Length = 245

 Score =  145 bits (365), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 87/111 (78%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WA RAV  LSQGQRQQVC ++L I  P  LLLDEP+++LDLP Q RL+  IA+  QQ
Sbjct: 129 LAHWAERAVSSLSQGQRQQVCWLSLLIAAPQLLLLDEPFASLDLPGQARLAQDIASAPQQ 188

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERAARDTA 111
           +++STH+LDHV+DFERV+WL+QG+LRADGPGRDIC+AY   V E+  + ++
Sbjct: 189 VLVSTHVLDHVRDFERVIWLEQGRLRADGPGRDICSAYETSVREQLLKKSS 239


>D8DCB5.1 D8DCB5_COMTE ATP-binding protein BioM
          Length = 249

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 86/111 (77%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WA RAV  LSQGQRQQVC ++L I  P  LLLDEP+++LDLP Q RL+  IA   QQ
Sbjct: 133 LAHWAERAVSSLSQGQRQQVCWLSLLIAAPQLLLLDEPFASLDLPGQARLAQDIATAPQQ 192

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHERAARDTA 111
           +++STH+LDHV+DFERV+WL+QG+LRADGPGRDIC+AY   V E+  + ++
Sbjct: 193 VLVSTHVLDHVRDFERVIWLEQGRLRADGPGRDICSAYETSVQEQLLKKSS 243


>A9C3B7.1 A9C3B7_DELAS ABC transporter related
          Length = 282

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 67/105 (63%), Positives = 81/105 (77%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L DWA RAV  LSQGQRQQVC +AL I  P  LLLDEP+++LDLP Q RL+  IAA  QQ
Sbjct: 173 LADWAPRAVAGLSQGQRQQVCWLALLIAAPRVLLLDEPFASLDLPGQARLARDIAAAEQQ 232

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHER 105
           +++STH+LDHV+ F RVLWL++GK+RADGPG  +CAAY  DV  R
Sbjct: 233 VLVSTHVLDHVRSFGRVLWLERGKVRADGPGHGVCAAYEADVARR 277


>B7WWU1.1 B7WWU1_COMTE ABC transporter related
          Length = 249

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 80/104 (76%)

Query: 1   LPDWAGRAVGELSQGQRQQVCLMALQITTPATLLLDEPYSALDLPSQLRLSAQIAATSQQ 60
           L  WA RAV  LSQGQRQ VC ++L I  P  LLLDEP+++LDLP Q RL+  IAA  QQ
Sbjct: 133 LAHWAERAVSSLSQGQRQLVCWLSLLIAAPQLLLLDEPFASLDLPGQARLAQDIAAAPQQ 192

Query: 61  IILSTHLLDHVQDFERVLWLDQGKLRADGPGRDICAAYAQDVHE 104
           +++STH+LDHV+DFERV+WL+QG+LR DGPGRDIC AY   V E
Sbjct: 193 VLVSTHVLDHVRDFERVIWLEQGRLRGDGPGRDICGAYETSVRE 236