BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0043.p (443 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value F1VX54.1 F1VX54_9BURK PAS/PAC sensor signal transduction histidi... 566 e-159 D8IR85.1 D8IR85_HERSS Two component transmembrane sensor histidi... 553 e-155 Q47HF4.1 Q47HF4_DECAR PAS protein 382 e-104 Q2T7B9.1 Q2T7B9_BURTA Sensory box sensor histidine kinase 334 2e-89 Q63JS0.1 Q63JS0_BURPS Probable two-component sensor kinase 325 7e-87 >F1VX54.1 F1VX54_9BURK PAS/PAC sensor signal transduction histidine kinase Length = 440 Score = 567 bits (1460), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/433 (63%), Positives = 341/433 (78%), Gaps = 5/433 (1%) Query: 4 QFETFESSPL-----SSADRVADVAPVNIAQRFEYLIANTPAIIYSSVPSGDFKMTFVSE 58 QF F+ PL A+ V+ R EYLIANTPAIIYSSVP+GDFKMTFVS+ Sbjct: 2 QFHDFDQQPLPQPHIDPAEHAGASTLVSTNARLEYLIANTPAIIYSSVPTGDFKMTFVSD 61 Query: 59 NASRVLGYDPKEMVADPNFWFDHIHPDDAPDIFSSLAMLFVEGERAYEYRFLTKDKRYLW 118 NA RVLGY+P +MVADPNFWFDHIHP+D P IFSSLA+LFVEG+R+YEYRF T D YLW Sbjct: 62 NARRVLGYEPADMVADPNFWFDHIHPEDIPTIFSSLALLFVEGQRSYEYRFKTSDGIYLW 121 Query: 119 MHDSLRLIRDENNNPVEVIGSLTNITERKLMEEALQRTGEEQRSLINKLKEAQEQLLQSE 178 MHD+LRL+RD NN P+EV+G L+NITERK MEEALQ+ G+EQ+ +I ++++ Q QLLQSE Sbjct: 122 MHDTLRLMRDANNEPLEVVGLLSNITERKKMEEALQKKGDEQQRMIEEMQQMQAQLLQSE 181 Query: 179 KMASIGQLAAGVAHEINNPVGFVSSNMKSLQTYVDQLLEVIVRQDALLSDDSLGEDLRQQ 238 KMASIGQLAAG+AHEINNPVGFV+SN+ SL+ YVD LL+VI R DA ++ + L+ Q Sbjct: 182 KMASIGQLAAGIAHEINNPVGFVNSNLGSLRAYVDTLLDVIERYDAAVATTADMSALKSQ 241 Query: 239 ARQLSASADLAYLKGDVVELITESLEGLKRVKDIVQSLKDFSHVGESDWQMVDIRKGLES 298 Q+ A++ YL+ D V L++ESL+GLKRV+DIVQSLKDF+HVGESDWQ+ D+ GL+S Sbjct: 242 LAQIQQEAEVDYLREDAVALVSESLDGLKRVRDIVQSLKDFAHVGESDWQVADLHHGLDS 301 Query: 299 TITIANNELKYKTVIERQYGELPLIKGLASQLNQVFMNLLVNAAHSFAERGTIRIRTECK 358 T+ IA NE KYK IE+ YG+LPL+ LASQ+NQVFMNL++NAA + ++GTI IRT Sbjct: 302 TLMIAANEFKYKASIEKHYGKLPLVMCLASQINQVFMNLIINAAQAITDKGTITIRTGVS 361 Query: 359 EDWVYIQVEDTGCGIPPENLSRIFEPFFTTKPIGSGTGLGLSLSYGIVQKHGGRIDVQSE 418 +DWV+I++ DTG GI + ++RIFEPFFTTKPIG GTGLGLSLSY IV +H GRI+V S+ Sbjct: 362 DDWVWIEIGDTGKGIAADQINRIFEPFFTTKPIGQGTGLGLSLSYNIVSQHSGRIEVDSQ 421 Query: 419 VGVGTCFTVCLPV 431 V +GT FTV LP+ Sbjct: 422 VDLGTRFTVHLPI 434 >D8IR85.1 D8IR85_HERSS Two component transmembrane sensor histidine kinase protein EC=2.7.3.- Length = 454 Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust. Identities = 272/429 (63%), Positives = 324/429 (75%), Gaps = 2/429 (0%) Query: 5 FETFESSPLSSADRVAD--VAPVNIAQRFEYLIANTPAIIYSSVPSGDFKMTFVSENASR 62 FE + PL +A A A + R+ ++I NTPAIIYSSVPSGDF++TFVSENASR Sbjct: 7 FEVSQVCPLPAAKEEAPDFCALIKANARYRHIIGNTPAIIYSSVPSGDFRLTFVSENASR 66 Query: 63 VLGYDPKEMVADPNFWFDHIHPDDAPDIFSSLAMLFVEGERAYEYRFLTKDKRYLWMHDS 122 VLGY+P EM+ DPNFWF+HIHPDD IFSSLAMLFVE ++ YEYRF T + YLWMHD+ Sbjct: 67 VLGYEPCEMLDDPNFWFNHIHPDDTAQIFSSLAMLFVEDQKIYEYRFRTSNGSYLWMHDT 126 Query: 123 LRLIRDENNNPVEVIGSLTNITERKLMEEALQRTGEEQRSLINKLKEAQEQLLQSEKMAS 182 LRLIRD + P EVIG +T+IT RK ME+ LQR EEQR LI +LK AQ QL+QSEK+AS Sbjct: 127 LRLIRDPDGTPQEVIGLMTDITGRKEMEDTLQRQAEEQRKLIEQLKMAQAQLMQSEKLAS 186 Query: 183 IGQLAAGVAHEINNPVGFVSSNMKSLQTYVDQLLEVIVRQDALLSDDSLGEDLRQQARQL 242 IGQLAAGVAHEINNP+GFVS+N+ +L YV LLE I L ++Q R Sbjct: 187 IGQLAAGVAHEINNPIGFVSANLNTLGNYVATLLEGIQLHQCLQGGALPAAMAQEQLRSF 246 Query: 243 SASADLAYLKGDVVELITESLEGLKRVKDIVQSLKDFSHVGESDWQMVDIRKGLESTITI 302 A ADLA+L DV EL+ ES EGL+RV++IVQSLKDFS +GES+WQM D+ +GL+ST+ I Sbjct: 247 EARADLAFLSEDVTELLAESNEGLQRVRNIVQSLKDFSRIGESNWQMTDLHRGLDSTLNI 306 Query: 303 ANNELKYKTVIERQYGELPLIKGLASQLNQVFMNLLVNAAHSFAERGTIRIRTECKEDWV 362 ANNELKYK I +QYGELPL+K LAS+LNQVFMNLLVNAA + +ERGT+ I T D V Sbjct: 307 ANNELKYKVSIVKQYGELPLVKCLASELNQVFMNLLVNAAQAISERGTVTICTARAGDKV 366 Query: 363 YIQVEDTGCGIPPENLSRIFEPFFTTKPIGSGTGLGLSLSYGIVQKHGGRIDVQSEVGVG 422 + + DTG GI PENL+RIFEPFFTTKP+GSGTGLGLSLSYGIV+KHGG I V S G G Sbjct: 367 SVSISDTGHGIAPENLNRIFEPFFTTKPVGSGTGLGLSLSYGIVKKHGGDIRVSSAPGCG 426 Query: 423 TCFTVCLPV 431 T FT+ LP+ Sbjct: 427 TTFTIELPI 435 >Q47HF4.1 Q47HF4_DECAR PAS protein Length = 1187 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 203/424 (47%), Positives = 275/424 (64%), Gaps = 5/424 (1%) Query: 14 SSADRVADVAPVNIAQRFEYLIAN-TPAIIYSSVPSGDFKMTFVSENASRVLGYDPKEMV 72 S A R+A A R + N +P I + +G + + FVS+N + GY +++ Sbjct: 756 SDAWRIASQQRAEQALRIAMQVVNASPVICFRWQATGGWPVVFVSDNVTN-WGYTVADLI 814 Query: 73 ADPNFWFDHIHPDDAPDIFSSLAMLFVEGERAY--EYRFLTKDKRYLWMHDSLRLIRDEN 130 A + D +HPDD + + EG Y EYR LT D R +W+ D +++R+ + Sbjct: 815 AGNPAFADMVHPDDLSRVVEEVTRYTAEGRTDYIQEYRLLTGDGRVIWISDRTQVLRNAS 874 Query: 131 NNPVEVIGSLTNITERKLMEEALQRTGEEQRSLINKLKEAQEQLLQSEKMASIGQLAAGV 190 G LT+ITER E L T QR L +L+EA QLLQSEKMASIGQLAAG+ Sbjct: 875 GGAEFYDGVLTDITERHTQTEELTTTLAAQRQLNKRLEEAHNQLLQSEKMASIGQLAAGI 934 Query: 191 AHEINNPVGFVSSNMKSLQTYVDQLLEVIVRQDALLSDDSLGEDLRQQARQLSASADLAY 250 AHE+NNP+GFV SN+ +L++Y+ L+E+I D L+DD+ R +L D AY Sbjct: 935 AHELNNPIGFVHSNLGTLESYLRDLMEIIDAYDKGLADDTDLAAQRTAIARLREERDFAY 994 Query: 251 LKGDVVELITESLEGLKRVKDIVQSLKDFSHVGESDWQMVDIRKGLESTITIANNELKYK 310 ++GD+++L++ES +GL RV+ IVQ LK FSHV E +WQ D+ +GL+ST+ I NELKYK Sbjct: 995 VRGDIIQLLSESKDGLSRVRKIVQDLKTFSHVSEQEWQWTDLHQGLDSTLNIVWNELKYK 1054 Query: 311 TVIERQYGELPLIKGLASQLNQVFMNLLVNAAHSFAERGTIRIRTECK-EDWVYIQVEDT 369 + ++YG++P I L SQLNQVFMNLLVNA H+ RGTI IRT + +D V I++ DT Sbjct: 1055 CQVVKEYGDIPKIHCLISQLNQVFMNLLVNAGHAIETRGTITIRTRRQGDDAVCIEISDT 1114 Query: 370 GCGIPPENLSRIFEPFFTTKPIGSGTGLGLSLSYGIVQKHGGRIDVQSEVGVGTCFTVCL 429 G GI PE+LSRIFEPFFTTKP+G GTGLGLSLSYGI+ KH GRI+V S++GVG+ F + L Sbjct: 1115 GKGIAPEHLSRIFEPFFTTKPVGKGTGLGLSLSYGIIDKHHGRIEVDSQLGVGSTFRIIL 1174 Query: 430 PVTQ 433 P+ Q Sbjct: 1175 PINQ 1178 >Q2T7B9.1 Q2T7B9_BURTA Sensory box sensor histidine kinase Length = 358 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/300 (55%), Positives = 216/300 (72%), Gaps = 4/300 (1%) Query: 143 ITERKLMEEALQRTGEEQRSLINKLKEAQEQLLQSEKMASIGQLAAGVAHEINNPVGFVS 202 I ERK + L+ E QR LI +L +A QLLQSEK+ASIGQLAAGVAHEINNP+GFV Sbjct: 60 IEERKRTQAELETEREAQRHLIEQLAQAHGQLLQSEKLASIGQLAAGVAHEINNPIGFVD 119 Query: 203 SNMKSLQTYVDQLLEVIVRQDALLSDDSLGEDLRQQARQLSASADLAYLKGDVVELITES 262 SN++ L+T+V QLL+V+ +DA+++D G D R + R DL YL+GD+ LI ES Sbjct: 120 SNLRMLKTWVRQLLDVMALEDAMIAD--AGGDARARLRAAHEEVDLDYLRGDIGTLIDES 177 Query: 263 LEGLKRVKDIVQSLKDFSHVGESDWQMVDIRKGLESTITIANNELKYKTVIERQYGELPL 322 +EG RV+ IVQ L+DFS G +W DI +GLE+T+ + NELKYK + + YGELP Sbjct: 178 IEGASRVRRIVQDLRDFSRAGSEEWNFTDIHEGLEATLNVVRNELKYKAEVVKDYGELPA 237 Query: 323 IKGLASQLNQVFMNLLVNAAHSFAERGTIRIRTECKEDWVYIQVEDTGCGIPPENLSRIF 382 ++ + SQLNQV MNLL+NA + ERGTI IRT + D V I +EDTG GIP + +++IF Sbjct: 238 VECMPSQLNQVMMNLLMNAVQAIVERGTITIRTRREGDGVTIAIEDTGVGIPADRIAKIF 297 Query: 383 EPFFTTKPIGSGTGLGLSLSYGIVQKHGGRIDVQSEVGVGTCFTVCLPVTQIKETLQQDA 442 +PF+TTKP+G GTGLGLS+SYGIV+KHGGRI+V SE G G+ FT+ LP+ ++ L QDA Sbjct: 298 DPFYTTKPVGKGTGLGLSVSYGIVEKHGGRIEVDSEPGNGSRFTIWLPI--VRRRLLQDA 355 >Q63JS0.1 Q63JS0_BURPS Probable two-component sensor kinase Length = 389 Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 164/301 (54%), Positives = 216/301 (71%), Gaps = 4/301 (1%) Query: 143 ITERKLMEEALQRTGEEQRSLINKLKEAQEQLLQSEKMASIGQLAAGVAHEINNPVGFVS 202 I ERK + L+ E QR LI +L +A QLLQSEK+ASIGQLAAGVAHEINNP+GFV Sbjct: 91 IEERKRTQAELETEREAQRHLIEQLAQAHGQLLQSEKLASIGQLAAGVAHEINNPIGFVD 150 Query: 203 SNMKSLQTYVDQLLEVIVRQDALLSDDSLGEDLRQQARQLSASADLAYLKGDVVELITES 262 SN+++L+T+V QLL+V+ +DAL++D G+ + R A DL YL+GD+ LI ES Sbjct: 151 SNLRTLKTWVRQLLDVMAIEDALIAD--CGDAALARLRAAHAEVDLDYLRGDIGTLIDES 208 Query: 263 LEGLKRVKDIVQSLKDFSHVGESDWQMVDIRKGLESTITIANNELKYKTVIERQYGELPL 322 +EG RV+ IVQ L+DFS G +W D+ +GLE+T+ + NELKYK + + YGELP Sbjct: 209 IEGASRVRRIVQDLRDFSRAGSEEWNFADVHEGLEATLNVLRNELKYKAEVVKDYGELPA 268 Query: 323 IKGLASQLNQVFMNLLVNAAHSFAERGTIRIRTECKEDWVYIQVEDTGCGIPPENLSRIF 382 ++ + SQLNQV MNLL+NAA + E GTI IRT + D V I +EDTG GIP + L++IF Sbjct: 269 VECMPSQLNQVVMNLLMNAAQAIVEHGTITIRTRREGDGVTIAIEDTGVGIPADRLAKIF 328 Query: 383 EPFFTTKPIGSGTGLGLSLSYGIVQKHGGRIDVQSEVGVGTCFTVCLPVTQIKETLQQDA 442 +PF+TTKP+G GTGLGLS+SYGIV+KHGGRI V SE G G+ FT+ LP+ +++ QDA Sbjct: 329 DPFYTTKPVGKGTGLGLSVSYGIVEKHGGRITVDSEPGNGSRFTIWLPI--VRQRSLQDA 386 Query: 443 G 443 Sbjct: 387 A 387