BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0227.p (253 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value E1TH68.1 E1TH68_BURSG Transcriptional regulator, GntR family 375 e-102 D5WED1.1 D5WED1_BURSC Transcriptional regulator, GntR family 374 e-102 B1FV50.1 B1FV50_9BURK Transcriptional regulator, GntR family 374 e-101 E8YQ68.1 E8YQ68_9BURK Transcriptional regulator, GntR family 372 e-101 D5NE72.1 D5NE72_9BURK Transcriptional regulator, GntR family 370 e-101 >E1TH68.1 E1TH68_BURSG Transcriptional regulator, GntR family Length = 242 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 189/251 (75%), Positives = 210/251 (83%), Gaps = 15/251 (5%) Query: 1 MQNSAIELTNKLDQSEKQIIPA--ALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNER 58 MQNS E + +PA ALPK+ERQRLHDTVVEH+R IVE VL PG KLNER Sbjct: 1 MQNSEFEGS----------LPASPALPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNER 50 Query: 59 ELCETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGE 118 ELCETLGISRTPLREALKVLAAEGLI+ISPNRGASVSKM+E E+RETFELMSGLEA SGE Sbjct: 51 ELCETLGISRTPLREALKVLAAEGLIEISPNRGASVSKMSEAELRETFELMSGLEAFSGE 110 Query: 119 LACERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGL 178 LA ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ + Sbjct: 111 LAAERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSV 170 Query: 179 NRRLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 NRRLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V A Sbjct: 171 NRRLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQA 230 Query: 239 PPAANEAPAGN 249 +EA AG+ Sbjct: 231 R---DEAAAGS 238 >D5WED1.1 D5WED1_BURSC Transcriptional regulator, GntR family Length = 249 Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/231 (77%), Positives = 199/231 (86%), Gaps = 3/231 (1%) Query: 24 LPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNERELCETLGISRTPLREALKVLAAEGL 83 +PK+ERQRLHDTVVEH+R IVE VL PG KLNERELCETLGISRTPLREALKVLAAEGL Sbjct: 16 MPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNERELCETLGISRTPLREALKVLAAEGL 75 Query: 84 IDISPNRGASVSKMTETEIRETFELMSGLEAMSGELACERITPVEVAEIKALHYAMLACK 143 I+ISPNRGASVSKM+E E+RETFELMSGLEA SGELA ERIT E+AEIKALHYAMLAC+ Sbjct: 76 IEISPNRGASVSKMSEAEVRETFELMSGLEAFSGELAAERITAAELAEIKALHYAMLACR 135 Query: 144 AQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNRRLQALRFKSNFRPEKWDSAAHDH 203 AQNDLPGYYSRNQ IH+KINEAARNS L QTY+ +NRRLQALRF+SN++ KWD A HDH Sbjct: 136 AQNDLPGYYSRNQAIHDKINEAARNSALRQTYVSVNRRLQALRFRSNYQTPKWDRAIHDH 195 Query: 204 DEMVKALEARDGKRLASILRQHLLDKRDAVLNVPAPP---AANEAPAGNTN 251 DEM+KALEARDGK+L++ILRQHLLDKRDAVL V A+ P G N Sbjct: 196 DEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQVQEEVVASARYPVGKQN 246 >B1FV50.1 B1FV50_9BURK Transcriptional regulator, GntR family Length = 242 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/238 (76%), Positives = 202/238 (84%), Gaps = 8/238 (3%) Query: 1 MQNSAIELTNKLDQSEKQIIPAALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNEREL 60 MQNS IE + A LPK+ERQRLHDTVVEH+R IVE VL PG KLNEREL Sbjct: 1 MQNSEIEAGSA--------GSAVLPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNEREL 52 Query: 61 CETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGELA 120 CETLGISRTPLREALKVLAAEGLI+ISPNRGASVSKM+E E+RETFELMSGLEA SGELA Sbjct: 53 CETLGISRTPLREALKVLAAEGLIEISPNRGASVSKMSEAELRETFELMSGLEAFSGELA 112 Query: 121 CERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNR 180 ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ +NR Sbjct: 113 AERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSVNR 172 Query: 181 RLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 RLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V + Sbjct: 173 RLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQS 230 >E8YQ68.1 E8YQ68_9BURK Transcriptional regulator, GntR family Length = 242 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/238 (76%), Positives = 202/238 (84%), Gaps = 8/238 (3%) Query: 1 MQNSAIELTNKLDQSEKQIIPAALPKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNEREL 60 MQNS +E + + A LPK+ERQRLHDTVVEH+R IVE VL PG KLNEREL Sbjct: 1 MQNSEVEGGS--------LGAAQLPKVERQRLHDTVVEHIRRFIVEGVLEPGKKLNEREL 52 Query: 61 CETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGELA 120 CETLGISRTPLREALKVLAAEGLIDI PNRGASVSKM+E E+RETFELMSGLEA SGELA Sbjct: 53 CETLGISRTPLREALKVLAAEGLIDIWPNRGASVSKMSEAELRETFELMSGLEAFSGELA 112 Query: 121 CERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLNR 180 ER+T E+AEIKALHYAMLAC+AQNDL GYYSRNQ IH+KINEAARNS L QTY+ +NR Sbjct: 113 AERMTAAELAEIKALHYAMLACRAQNDLAGYYSRNQAIHDKINEAARNSALRQTYVSVNR 172 Query: 181 RLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPA 238 RLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V + Sbjct: 173 RLQALRFRSNFQIPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQS 230 >D5NE72.1 D5NE72_9BURK Transcriptional regulator, GntR family Length = 241 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 183/247 (74%), Positives = 204/247 (82%), Gaps = 10/247 (4%) Query: 1 MQNSAIELTNKLDQSEKQIIPAAL-PKLERQRLHDTVVEHLRNLIVEAVLMPGTKLNERE 59 MQNS E I P+ L PK+ERQRLHDTVVEH+R IVE L G KLNERE Sbjct: 1 MQNSGFETG---------IAPSPLMPKVERQRLHDTVVEHIRRFIVEGALEAGKKLNERE 51 Query: 60 LCETLGISRTPLREALKVLAAEGLIDISPNRGASVSKMTETEIRETFELMSGLEAMSGEL 119 LCETLGISRTPLREALKVLAAEGLI+ISPNRGASVSKM+E E+RETFELMSGLEA SGEL Sbjct: 52 LCETLGISRTPLREALKVLAAEGLIEISPNRGASVSKMSEAELRETFELMSGLEAFSGEL 111 Query: 120 ACERITPVEVAEIKALHYAMLACKAQNDLPGYYSRNQTIHNKINEAARNSVLHQTYLGLN 179 A ER+T E++EIKALHYAMLAC+ QNDLPGYYSRNQ IH+KINEAARNS L QTY+ +N Sbjct: 112 AAERMTAAELSEIKALHYAMLACRTQNDLPGYYSRNQAIHDKINEAARNSALRQTYMAVN 171 Query: 180 RRLQALRFKSNFRPEKWDSAAHDHDEMVKALEARDGKRLASILRQHLLDKRDAVLNVPAP 239 RRLQALRF+SNF+ KWD A HDHDEM+KALEARDGK+L++ILRQHLLDKRDAVL V + Sbjct: 172 RRLQALRFRSNFQVPKWDRAIHDHDEMLKALEARDGKKLSAILRQHLLDKRDAVLQVQSQ 231 Query: 240 PAANEAP 246 AA +P Sbjct: 232 EAAAASP 238