BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0221.p (359 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D5NNW7.1 D5NNW7_9BURK Xylose isomerase domain protein TIM barrel 552 e-155 B2T127.1 B2T127_BURPP Xylose isomerase domain protein TIM barrel 551 e-155 B1FXG5.1 B1FXG5_9BURK Xylose isomerase domain protein TIM barrel 550 e-154 Q144C2.1 Q144C2_BURXL Putative uncharacterized protein 549 e-154 B2JEV1.1 B2JEV1_BURP8 Xylose isomerase domain protein TIM barrel 548 e-154 >D5NNW7.1 D5NNW7_9BURK Xylose isomerase domain protein TIM barrel Length = 349 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 268/357 (75%), Positives = 301/357 (84%), Gaps = 8/357 (2%) Query: 1 MQTIRGPAIFLAQFMGEEQPFDSLEHLAVWASGLGYKAVQLPTDPRLFDLALAAGSQIGX 60 M+TI+GPAIFLAQFMG+E PFD+L HLA WA+GLG+K +Q+P D RL DL AA SQ Sbjct: 1 MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQT-- 58 Query: 61 PPPPQQYCDDIAGMLAGHGLQISELSTHLQGQLIAVHPAYDALFDGFAPVHLRGNPAARR 120 YCD++ ++ G+ I+ELSTHLQGQL+AVHPAYDALFDGFA H+RG+PAAR Sbjct: 59 ------YCDELREIVDDAGVTITELSTHLQGQLVAVHPAYDALFDGFAAPHVRGDPAART 112 Query: 121 VWATEQLMFAAEASRRLDLRAHVTFSGALAWPYLYPWPQRPAGLVETAFAELGRRWRPIL 180 WA EQ+ AA+AS+RL L HV+FSGALAWPYLYPWPQRPAGLVE AF EL RRW PIL Sbjct: 113 QWAIEQMKLAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPIL 172 Query: 181 DAFDAAGVDVCYELHPGEDLHDGVTFDRFLQEVDGHARANILYDPSHFVLQQLDYLAFID 240 DAFDAAGVDVCYELHPGEDLHDGVTF+RFL V HARANILYDPSHFVLQQLDYLAFID Sbjct: 173 DAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFID 232 Query: 241 IYHARIKAFHVKDAEFRPTGRQGVYGGFSDWQDRAGRFRSLGDGQIDFKAIFSKLTQYDY 300 IYH RIKAFHVKDAEFRPTG+QGVYGG+S W +RAGRFRSLGDGQIDF AIFSK+ QYD+ Sbjct: 233 IYHERIKAFHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDF 292 Query: 301 PGWAVLEWECCLKHPQDGAAEGAEFIRKHIIRVAQHAFDDFAGSTVRQEQINQLLGL 357 PGWAVLEWEC LKHP DGA EGAEFIR+HIIRVA+HAFDDFAGS V Q+ ++LG+ Sbjct: 293 PGWAVLEWECALKHPHDGAREGAEFIRRHIIRVAEHAFDDFAGSGVDAAQLKRVLGI 349 >B2T127.1 B2T127_BURPP Xylose isomerase domain protein TIM barrel Length = 349 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 267/357 (74%), Positives = 300/357 (84%), Gaps = 8/357 (2%) Query: 1 MQTIRGPAIFLAQFMGEEQPFDSLEHLAVWASGLGYKAVQLPTDPRLFDLALAAGSQIGX 60 M+TI+GPAIFLAQFMG+E PFD+L HLA WA+GLG+K +Q+P D RL DL AA SQ Sbjct: 1 MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAAASQT-- 58 Query: 61 PPPPQQYCDDIAGMLAGHGLQISELSTHLQGQLIAVHPAYDALFDGFAPVHLRGNPAARR 120 YCD++ ++ G+ I+ELSTHLQGQL+AVHPAYDALFDGFA H+RG+PAAR Sbjct: 59 ------YCDELREIVDNAGVTITELSTHLQGQLVAVHPAYDALFDGFAAPHVRGDPAART 112 Query: 121 VWATEQLMFAAEASRRLDLRAHVTFSGALAWPYLYPWPQRPAGLVETAFAELGRRWRPIL 180 WA EQ+ AA+AS+RL L HV+FSGALAWPYLYPWPQRPAGLVE AF EL RRW PIL Sbjct: 113 QWAIEQMKLAAKASQRLGLTTHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPIL 172 Query: 181 DAFDAAGVDVCYELHPGEDLHDGVTFDRFLQEVDGHARANILYDPSHFVLQQLDYLAFID 240 DAFDAAGVDVCYELHPGEDLHDGVTF+RFL V HARANILYDPSHFVLQQLDYLAFID Sbjct: 173 DAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFID 232 Query: 241 IYHARIKAFHVKDAEFRPTGRQGVYGGFSDWQDRAGRFRSLGDGQIDFKAIFSKLTQYDY 300 IYH RIKAFHVKDAEFRP G+QGVYGG+S W +RAGRFRSLGDGQIDF AIFSK+ QYD+ Sbjct: 233 IYHERIKAFHVKDAEFRPNGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDF 292 Query: 301 PGWAVLEWECCLKHPQDGAAEGAEFIRKHIIRVAQHAFDDFAGSTVRQEQINQLLGL 357 PGWAVLEWEC LKHP DGA EGAEFIR+HIIRVA+HAFDDFAGS V Q+ ++LG+ Sbjct: 293 PGWAVLEWECALKHPHDGAREGAEFIRRHIIRVAEHAFDDFAGSGVDAAQLKRVLGI 349 >B1FXG5.1 B1FXG5_9BURK Xylose isomerase domain protein TIM barrel Length = 349 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 265/357 (74%), Positives = 298/357 (83%), Gaps = 8/357 (2%) Query: 1 MQTIRGPAIFLAQFMGEEQPFDSLEHLAVWASGLGYKAVQLPTDPRLFDLALAAGSQIGX 60 M+TI+GPAIFLAQFMG+E PFD+L HLA WA+ LG+K +Q+P D RL DL AA SQ Sbjct: 1 MKTIKGPAIFLAQFMGDEAPFDNLAHLASWAASLGFKGIQVPCDARLIDLEQAASSQ--- 57 Query: 61 PPPPQQYCDDIAGMLAGHGLQISELSTHLQGQLIAVHPAYDALFDGFAPVHLRGNPAARR 120 YCDD+ + G+ I+ELSTHLQGQL+AVHPAYD LFDGFA H+RGNP+AR Sbjct: 58 -----SYCDDLRETVDNAGVTITELSTHLQGQLVAVHPAYDTLFDGFAAAHVRGNPSART 112 Query: 121 VWATEQLMFAAEASRRLDLRAHVTFSGALAWPYLYPWPQRPAGLVETAFAELGRRWRPIL 180 WA EQL AA+AS+RL L AHV+FSGALAWPYLYPWPQRPAGLVE AF EL RRW PIL Sbjct: 113 EWAIEQLKLAAKASQRLGLDAHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPIL 172 Query: 181 DAFDAAGVDVCYELHPGEDLHDGVTFDRFLQEVDGHARANILYDPSHFVLQQLDYLAFID 240 DAFDAAGV+VCYELHPGEDLHDGVTF+RFL V H RANILYDPSHFVLQQLDYLAFID Sbjct: 173 DAFDAAGVNVCYELHPGEDLHDGVTFERFLDAVRQHPRANILYDPSHFVLQQLDYLAFID 232 Query: 241 IYHARIKAFHVKDAEFRPTGRQGVYGGFSDWQDRAGRFRSLGDGQIDFKAIFSKLTQYDY 300 IYH RIKAFHVKDAEFRP G+QGVYGG+S W +RAGRFRSLGDGQIDF+AIFSK+ QYD+ Sbjct: 233 IYHERIKAFHVKDAEFRPNGKQGVYGGYSGWVERAGRFRSLGDGQIDFRAIFSKMAQYDF 292 Query: 301 PGWAVLEWECCLKHPQDGAAEGAEFIRKHIIRVAQHAFDDFAGSTVRQEQINQLLGL 357 PGWAVLEWEC LKHP DGA EGA+FIR+HIIRVA+HAFDDFAGS V Q+ ++LG+ Sbjct: 293 PGWAVLEWECALKHPHDGAREGAQFIREHIIRVAEHAFDDFAGSGVDAAQLKRVLGI 349 >Q144C2.1 Q144C2_BURXL Putative uncharacterized protein Length = 349 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 267/357 (74%), Positives = 299/357 (83%), Gaps = 8/357 (2%) Query: 1 MQTIRGPAIFLAQFMGEEQPFDSLEHLAVWASGLGYKAVQLPTDPRLFDLALAAGSQIGX 60 M+TI+GPAIFLAQFMG+E PFD+L HLA WA+GLG+K +Q+P D RL DL AA SQ Sbjct: 1 MKTIQGPAIFLAQFMGDEVPFDNLAHLAEWAAGLGFKGIQVPCDSRLIDLEQAASSQT-- 58 Query: 61 PPPPQQYCDDIAGMLAGHGLQISELSTHLQGQLIAVHPAYDALFDGFAPVHLRGNPAARR 120 YCD++ + G+ I+ELSTHLQGQL+AVHPAYDALFDGFA +RG+PAAR Sbjct: 59 ------YCDELRETVDDAGVTITELSTHLQGQLVAVHPAYDALFDGFAAPQVRGDPAART 112 Query: 121 VWATEQLMFAAEASRRLDLRAHVTFSGALAWPYLYPWPQRPAGLVETAFAELGRRWRPIL 180 WA EQ+ AA+AS+RL L HV+FSGALAWPYLYPWPQRPAGLVE AF EL RRW PIL Sbjct: 113 QWAIEQMKLAAKASQRLGLSTHVSFSGALAWPYLYPWPQRPAGLVEAAFDELARRWTPIL 172 Query: 181 DAFDAAGVDVCYELHPGEDLHDGVTFDRFLQEVDGHARANILYDPSHFVLQQLDYLAFID 240 DAFDAAGVDVCYELHPGEDLHDGVTF+RFL V HARANILYDPSHFVLQQLDYLAFID Sbjct: 173 DAFDAAGVDVCYELHPGEDLHDGVTFERFLDAVKQHARANILYDPSHFVLQQLDYLAFID 232 Query: 241 IYHARIKAFHVKDAEFRPTGRQGVYGGFSDWQDRAGRFRSLGDGQIDFKAIFSKLTQYDY 300 IYH RIKAFHVKDAEFRPTG+QGVYGG+S W +RAGRFRSLGDGQIDF AIFSK+ QYD+ Sbjct: 233 IYHERIKAFHVKDAEFRPTGKQGVYGGYSGWVERAGRFRSLGDGQIDFGAIFSKMAQYDF 292 Query: 301 PGWAVLEWECCLKHPQDGAAEGAEFIRKHIIRVAQHAFDDFAGSTVRQEQINQLLGL 357 PGWAVLEWEC LKHP DGA EGAEFIR+HIIRVA+HAFDDFAGS V Q+ ++LG+ Sbjct: 293 PGWAVLEWECALKHPHDGAREGAEFIRRHIIRVAEHAFDDFAGSGVDAAQLKRVLGI 349 >B2JEV1.1 B2JEV1_BURP8 Xylose isomerase domain protein TIM barrel Length = 349 Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust. Identities = 265/357 (74%), Positives = 296/357 (82%), Gaps = 8/357 (2%) Query: 1 MQTIRGPAIFLAQFMGEEQPFDSLEHLAVWASGLGYKAVQLPTDPRLFDLALAAGSQIGX 60 M+TI+GPAIFLAQFMG + PFD+L HLA WA+GLG+K +Q+P DPRL DL AA SQ Sbjct: 1 MKTIKGPAIFLAQFMGADAPFDNLAHLARWAAGLGFKGIQVPADPRLVDLEQAASSQ--- 57 Query: 61 PPPPQQYCDDIAGMLAGHGLQISELSTHLQGQLIAVHPAYDALFDGFAPVHLRGNPAARR 120 YCDD+ G++A G+ I+ELSTHLQGQL+AVHPAYD LFDGFA H+RGNPAAR Sbjct: 58 -----AYCDDLLGVVADAGVAITELSTHLQGQLVAVHPAYDVLFDGFAAPHVRGNPAART 112 Query: 121 VWATEQLMFAAEASRRLDLRAHVTFSGALAWPYLYPWPQRPAGLVETAFAELGRRWRPIL 180 WA +QL +AA+AS RL L H TFSGALAWPY+YPWPQRPAGLVE AF EL RRW PIL Sbjct: 113 EWAVQQLKWAAQASARLGLTTHATFSGALAWPYIYPWPQRPAGLVEAAFDELARRWTPIL 172 Query: 181 DAFDAAGVDVCYELHPGEDLHDGVTFDRFLQEVDGHARANILYDPSHFVLQQLDYLAFID 240 D FD AG+DVCYELHPGEDLHDGVTF+RFL V H RANIL+DPSHFVLQQLDYLAFID Sbjct: 173 DVFDTAGIDVCYELHPGEDLHDGVTFERFLAAVKNHTRANILFDPSHFVLQQLDYLAFID 232 Query: 241 IYHARIKAFHVKDAEFRPTGRQGVYGGFSDWQDRAGRFRSLGDGQIDFKAIFSKLTQYDY 300 IYH RIKAFHVKDAEFRP GRQGVYGG+S W +RAGRFRS GDGQIDF AIFSK+ QYD+ Sbjct: 233 IYHERIKAFHVKDAEFRPDGRQGVYGGYSGWVERAGRFRSPGDGQIDFGAIFSKMAQYDF 292 Query: 301 PGWAVLEWECCLKHPQDGAAEGAEFIRKHIIRVAQHAFDDFAGSTVRQEQINQLLGL 357 PGWAVLEWEC LKHP+DGA EGAEFIR+HIIRVA HAFDDFAGS Q Q+ ++LGL Sbjct: 293 PGWAVLEWECALKHPEDGAREGAEFIRRHIIRVAAHAFDDFAGSGADQAQLKRVLGL 349