BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0025.0217.p         (189 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B5WML7.1 B5WML7_9BURK Transcriptional regulator, LacI family          284   4e-75
D5WCZ9.1 D5WCZ9_BURSC Transcriptional regulator, LacI family          283   1e-74
E1TAV7.1 E1TAV7_BURSG Transcriptional regulator, LacI family          281   4e-74
B2T123.1 B2T123_BURPP Transcriptional regulator, LacI family EC=...   278   3e-73
D5NNW3.1 D5NNW3_9BURK Transcriptional regulator, LacI family          276   1e-72

>B5WML7.1 B5WML7_9BURK Transcriptional regulator, LacI family
          Length = 360

 Score =  284 bits (726), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 142/188 (75%), Positives = 162/188 (86%)

Query: 1   VACCEFDPAMPVPYVGIDNRRAAADAVGHLLSRGHRRIGLINSDERYSYARQRQLGYMDA 60
           VACCEFDPAM VPYVGIDN RAA DAV HLL+RGHRRIGLINSD  Y YARQRQ GY+DA
Sbjct: 172 VACCEFDPAMGVPYVGIDNYRAAGDAVRHLLARGHRRIGLINSDVDYLYARQRQQGYLDA 231

Query: 61  LAGADLDARPQWRRTVQSLDYEAGAAAALEMMAQPDAPTAIFAVSDTLAIGVLSGLRQLG 120
           L+ A +   P+WR  + SLDYEAGA+AA  +M QPDAP+AIFAVSDTLAIGV+ GLR +G
Sbjct: 232 LSDAGIAPDPRWRMNLNSLDYEAGASAAAGLMQQPDAPSAIFAVSDTLAIGVIHGLRSVG 291

Query: 121 KRVPEDVAVIGFDDIAVAAQIDPGLSTVAQPMRALGETAARLLLQRLADPQIAVPGVLLD 180
           KRVP+DVAV GFDDI++AAQIDP L+T+AQPMR LGETAARLLLQRLA+PQ +VPGVLL 
Sbjct: 292 KRVPDDVAVAGFDDISLAAQIDPPLTTIAQPMRELGETAARLLLQRLANPQASVPGVLLP 351

Query: 181 HQLVLRGS 188
           H+LV+RGS
Sbjct: 352 HRLVIRGS 359


>D5WCZ9.1 D5WCZ9_BURSC Transcriptional regulator, LacI family
          Length = 362

 Score =  283 bits (723), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 141/188 (75%), Positives = 160/188 (85%)

Query: 1   VACCEFDPAMPVPYVGIDNRRAAADAVGHLLSRGHRRIGLINSDERYSYARQRQLGYMDA 60
           VACCEFDP M VPYVGIDN RAA DAV HLL+RGHRRIGLINSD  Y YARQRQ GY+DA
Sbjct: 174 VACCEFDPEMGVPYVGIDNYRAAGDAVRHLLARGHRRIGLINSDVNYLYARQRQQGYLDA 233

Query: 61  LAGADLDARPQWRRTVQSLDYEAGAAAALEMMAQPDAPTAIFAVSDTLAIGVLSGLRQLG 120
           L+ A +   P+WR  + SLDYEAGA+AA  +M +PDAP+AIFAVSDTLAIGV+ GLR +G
Sbjct: 234 LSDAGIAPDPRWRMNLNSLDYEAGASAAAGLMQEPDAPSAIFAVSDTLAIGVIHGLRSVG 293

Query: 121 KRVPEDVAVIGFDDIAVAAQIDPGLSTVAQPMRALGETAARLLLQRLADPQIAVPGVLLD 180
           KRVP+DVAV GFDDI+VAAQIDP L+T+AQPMR LGETAARLLLQRLA+PQ  VPGVLL 
Sbjct: 294 KRVPDDVAVAGFDDISVAAQIDPPLTTIAQPMRELGETAARLLLQRLANPQANVPGVLLP 353

Query: 181 HQLVLRGS 188
           H+LV+RGS
Sbjct: 354 HRLVIRGS 361


>E1TAV7.1 E1TAV7_BURSG Transcriptional regulator, LacI family
          Length = 343

 Score =  281 bits (718), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 141/189 (74%), Positives = 157/189 (83%)

Query: 1   VACCEFDPAMPVPYVGIDNRRAAADAVGHLLSRGHRRIGLINSDERYSYARQRQLGYMDA 60
           VACCEFDPAM VPYVGIDN RAA DAV HLL+RGH RIGLINSD  Y YARQRQ GY+DA
Sbjct: 155 VACCEFDPAMGVPYVGIDNYRAAGDAVRHLLARGHERIGLINSDIDYLYARQRQQGYLDA 214

Query: 61  LAGADLDARPQWRRTVQSLDYEAGAAAALEMMAQPDAPTAIFAVSDTLAIGVLSGLRQLG 120
           L  A +   P WR  + SLDYEAGA+AA  +M  PDAPTAIFAVSDTLA GVL GLR +G
Sbjct: 215 LTEAGITPLPGWRMNLNSLDYEAGASAAATLMLPPDAPTAIFAVSDTLATGVLHGLRSIG 274

Query: 121 KRVPEDVAVIGFDDIAVAAQIDPGLSTVAQPMRALGETAARLLLQRLADPQIAVPGVLLD 180
           KRVP+DVAVIGFDDI++AAQ+DP L+T+AQPMR LGETAARLLLQRLA+P   VPGVLL 
Sbjct: 275 KRVPDDVAVIGFDDISIAAQVDPPLTTIAQPMRELGETAARLLLQRLANPLANVPGVLLP 334

Query: 181 HQLVLRGST 189
           H+LV+RGST
Sbjct: 335 HRLVIRGST 343


>B2T123.1 B2T123_BURPP Transcriptional regulator, LacI family EC=5.1.1.1
          Length = 359

 Score =  278 bits (711), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 138/188 (73%), Positives = 159/188 (84%)

Query: 1   VACCEFDPAMPVPYVGIDNRRAAADAVGHLLSRGHRRIGLINSDERYSYARQRQLGYMDA 60
           VACCEFDPAM VPYVGIDN RAA DAV HLL+RGHRRIGLINSD  Y YARQRQ GY+DA
Sbjct: 171 VACCEFDPAMGVPYVGIDNYRAAGDAVRHLLARGHRRIGLINSDVDYLYARQRQQGYLDA 230

Query: 61  LAGADLDARPQWRRTVQSLDYEAGAAAALEMMAQPDAPTAIFAVSDTLAIGVLSGLRQLG 120
           L+ A +    +WR  + SLDYEAGA+AA  +M QP AP+AIFAVSDTLAIGV+ GLR +G
Sbjct: 231 LSAAGITPDERWRMNLNSLDYEAGASAAATLMNQPQAPSAIFAVSDTLAIGVIHGLRSVG 290

Query: 121 KRVPEDVAVIGFDDIAVAAQIDPGLSTVAQPMRALGETAARLLLQRLADPQIAVPGVLLD 180
           KRVP+D+AV+GFDDI++AAQIDP L+T+AQPMR LGETAARLLLQRLA+P   VPGVLL 
Sbjct: 291 KRVPDDIAVVGFDDISLAAQIDPPLTTIAQPMRELGETAARLLLQRLANPLANVPGVLLP 350

Query: 181 HQLVLRGS 188
           H+LV+RGS
Sbjct: 351 HRLVIRGS 358


>D5NNW3.1 D5NNW3_9BURK Transcriptional regulator, LacI family
          Length = 359

 Score =  276 bits (706), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/188 (73%), Positives = 157/188 (83%)

Query: 1   VACCEFDPAMPVPYVGIDNRRAAADAVGHLLSRGHRRIGLINSDERYSYARQRQLGYMDA 60
           VACCEFDPAM VPYVGIDN RAA DAV HLL+RGHRRIGLINSD  Y YARQRQ GY+DA
Sbjct: 171 VACCEFDPAMGVPYVGIDNYRAAGDAVRHLLARGHRRIGLINSDVDYLYARQRQQGYLDA 230

Query: 61  LAGADLDARPQWRRTVQSLDYEAGAAAALEMMAQPDAPTAIFAVSDTLAIGVLSGLRQLG 120
           L  A +    +WR  + SLDYEAGA+AA  +M QP AP AIFAVSDTLAIGV+ GLR +G
Sbjct: 231 LTEAGITPDERWRMNLNSLDYEAGASAAATLMNQPQAPGAIFAVSDTLAIGVIHGLRSVG 290

Query: 121 KRVPEDVAVIGFDDIAVAAQIDPGLSTVAQPMRALGETAARLLLQRLADPQIAVPGVLLD 180
           KRVP+D+AV+GFDDI++AAQIDP L+T+AQPMR LGETAARLLLQRLA+P   VPGVLL 
Sbjct: 291 KRVPDDIAVVGFDDISLAAQIDPPLTTIAQPMRELGETAARLLLQRLANPLANVPGVLLP 350

Query: 181 HQLVLRGS 188
           H+LV+RGS
Sbjct: 351 HRLVIRGS 358