BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0172.p (321 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISA1.1 D8ISA1_HERSS GTP-binding ERA protein 469 e-130 A6SXR4.1 A6SXR4_JANMA GTP-binding protein Era 432 e-119 A4G6R7.1 A4G6R7_HERAR GTP-binding protein Era 430 e-118 F1W2X4.1 F1W2X4_9BURK GTP-binding protein Era 421 e-116 C3X4M1.1 C3X4M1_OXAFO GTP-binding protein Era 370 e-100 >D8ISA1.1 D8ISA1_HERSS GTP-binding ERA protein Length = 309 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 227/263 (86%), Positives = 243/263 (92%), Gaps = 1/263 (0%) Query: 1 MTDLNAPSDASTDAL-SDYRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRI 59 MTD DAS SDYRCGYIAIVGRPNVGKSTLMN L+GAKVSITSRKAQTTRHRI Sbjct: 1 MTDSPMADDASAQTPDSDYRCGYIAIVGRPNVGKSTLMNVLVGAKVSITSRKAQTTRHRI 60 Query: 60 TGIQTINNTQFVYVDTPGFQTRHSNALNKTLNRTVTSTLTAADVILYVIEAGTFGPADKQ 119 TGIQTI NTQ+VYVDTPGFQTRHSNALNKTLNRTVT+TLTAADVIL+VIEAGTFGPADKQ Sbjct: 61 TGIQTIENTQYVYVDTPGFQTRHSNALNKTLNRTVTNTLTAADVILFVIEAGTFGPADKQ 120 Query: 120 VMALLPANVPCILVMNKSDRSKDKSVLMPFAQEVASQHNFASVVPVSAKQRFQLDSLQEE 179 V+ LLPANVPCILV+NK+DR+KDK+ LMPFA+EVAS H+FA+VVPVSAKQRFQLD LQEE Sbjct: 121 VLDLLPANVPCILVLNKADRNKDKTTLMPFAREVASHHDFAAVVPVSAKQRFQLDRLQEE 180 Query: 180 IRKLLPVNPPMFDEDDITDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGDLR 239 +RKLLP NPPMFDEDDITDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEG+LR Sbjct: 181 VRKLLPQNPPMFDEDDITDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGNLR 240 Query: 240 RVFAAILVERDGHKSMVIGNKGG 262 R+FAAILVERD HK+MVIG KG Sbjct: 241 RIFAAILVERDNHKAMVIGQKGA 263 >A6SXR4.1 A6SXR4_JANMA GTP-binding protein Era Length = 300 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/249 (83%), Positives = 229/249 (91%) Query: 14 ALSDYRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQTINNTQFVYV 73 ALS +RCGYIAIVGRPNVGKSTLMN LIGAKVSITSRKAQTTRHRITGIQT+ + QFVYV Sbjct: 6 ALSHFRCGYIAIVGRPNVGKSTLMNELIGAKVSITSRKAQTTRHRITGIQTVEDAQFVYV 65 Query: 74 DTPGFQTRHSNALNKTLNRTVTSTLTAADVILYVIEAGTFGPADKQVMALLPANVPCILV 133 DTPGFQTRHSNALNKTLNRTVT+TLTAADVILYVIEAGTFG AD+QV+ L+P NVPCILV Sbjct: 66 DTPGFQTRHSNALNKTLNRTVTNTLTAADVILYVIEAGTFGQADQQVLDLIPKNVPCILV 125 Query: 134 MNKSDRSKDKSVLMPFAQEVASQHNFASVVPVSAKQRFQLDSLQEEIRKLLPVNPPMFDE 193 +NKSDR KDK+VL+PFAQ++A++ +F +VVPVSAK RFQL+ LQ EI+K LP PP+F E Sbjct: 126 INKSDRVKDKAVLLPFAQQIAAKRDFTAVVPVSAKLRFQLEGLQGEIKKYLPEGPPIFGE 185 Query: 194 DDITDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGDLRRVFAAILVERDGHK 253 DDITDRSEKFLA+EIVREKVFRFVG+ELPYTSTVLIEKFE EG+LRRVFAAILVERD HK Sbjct: 186 DDITDRSEKFLAAEIVREKVFRFVGDELPYTSTVLIEKFEVEGNLRRVFAAILVERDTHK 245 Query: 254 SMVIGNKGG 262 SMVIGNKG Sbjct: 246 SMVIGNKGA 254 >A4G6R7.1 A4G6R7_HERAR GTP-binding protein Era Length = 300 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/248 (82%), Positives = 232/248 (93%) Query: 14 ALSDYRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQTINNTQFVYV 73 ALS +RCGYIAIVGRPNVGKSTLMN LIGAKVSITSRKAQTTRHRITGIQT+++ QFVYV Sbjct: 6 ALSHFRCGYIAIVGRPNVGKSTLMNELIGAKVSITSRKAQTTRHRITGIQTVDDAQFVYV 65 Query: 74 DTPGFQTRHSNALNKTLNRTVTSTLTAADVILYVIEAGTFGPADKQVMALLPANVPCILV 133 DTPGFQTRHSNALNKTLNRTVT+TLTA+DVIL+VIEAGTFG AD+QV+ L+P NVPCILV Sbjct: 66 DTPGFQTRHSNALNKTLNRTVTTTLTASDVILFVIEAGTFGQADQQVLDLIPKNVPCILV 125 Query: 134 MNKSDRSKDKSVLMPFAQEVASQHNFASVVPVSAKQRFQLDSLQEEIRKLLPVNPPMFDE 193 +NKSDR KDK+VL+PFAQ++A++ +F +VVPVSAK RFQL++LQ EI+K LP NPP+F E Sbjct: 126 INKSDRVKDKAVLLPFAQQIAAKRDFTAVVPVSAKLRFQLENLQGEIKKHLPENPPVFGE 185 Query: 194 DDITDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGDLRRVFAAILVERDGHK 253 DDITDRSEKFLA+EIVREK+FRFVG+ELPYTSTVLIEKFE EG+LRRVFAAILVERD HK Sbjct: 186 DDITDRSEKFLAAEIVREKLFRFVGDELPYTSTVLIEKFELEGNLRRVFAAILVERDTHK 245 Query: 254 SMVIGNKG 261 SMVIGNKG Sbjct: 246 SMVIGNKG 253 >F1W2X4.1 F1W2X4_9BURK GTP-binding protein Era Length = 300 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 209/293 (71%), Positives = 240/293 (81%), Gaps = 18/293 (6%) Query: 17 DYRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQTINNTQFVYVDTP 76 ++RCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQT+ +TQF+YVDTP Sbjct: 9 NFRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQTVEDTQFIYVDTP 68 Query: 77 GFQTRHSNALNKTLNRTVTSTLTAADVILYVIEAGTFGPADKQVMALLPANVPCILVMNK 136 GFQT+H+NALNKTLN+TV +TLT+ADVIL++IEAGTFGPAD+QV+ L+P VPCILV+NK Sbjct: 69 GFQTKHANALNKTLNKTVANTLTSADVILFLIEAGTFGPADQQVLDLIPDTVPCILVINK 128 Query: 137 SDRSKDKSVLMPFAQEVASQHNFASVVPVSAKQRFQLDSLQEEIRKLLPVNPPMFDEDDI 196 SDR KDK+VL+PFAQ++A++H+FA+VVPVSA FQLD LQ+E R+ LP NPP F DDI Sbjct: 129 SDRVKDKAVLLPFAQQIAAKHDFAAVVPVSATLGFQLDGLQKETRRFLPENPPEFGPDDI 188 Query: 197 TDRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGDLRRVFAAILVERDGHKSMV 256 TDRSEKFLA+EI+REKVFRFVG+ELPYTSTVLIEKFEQEGDLRRVFAAILVER HKSM+ Sbjct: 189 TDRSEKFLAAEIIREKVFRFVGDELPYTSTVLIEKFEQEGDLRRVFAAILVERSTHKSML 248 Query: 257 IGNKGGGGGGGXVITRRAWTWSACSAAR--------SIW---KSGSRSNPAGL 298 IG KG + T S AR IW KSG N AGL Sbjct: 249 IGQKGAR-------LKEISTQSRLDMARLFGGPVYLEIWVKVKSGWADNEAGL 294 >C3X4M1.1 C3X4M1_OXAFO GTP-binding protein Era Length = 299 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 167/244 (68%), Positives = 216/244 (88%) Query: 18 YRCGYIAIVGRPNVGKSTLMNALIGAKVSITSRKAQTTRHRITGIQTINNTQFVYVDTPG 77 +RCGYIAIVGRPNVGKSTLMN LIGAKVSITSRKAQTTRHRI GIQT ++ QF+Y+DTPG Sbjct: 9 FRCGYIAIVGRPNVGKSTLMNELIGAKVSITSRKAQTTRHRIMGIQTDDDAQFIYIDTPG 68 Query: 78 FQTRHSNALNKTLNRTVTSTLTAADVILYVIEAGTFGPADKQVMALLPANVPCILVMNKS 137 FQTR++NALNK LNRTV TL+ ADVIL+V++AG +G AD+QV+ L+P NVP ILV+NK+ Sbjct: 69 FQTRYNNALNKNLNRTVRDTLSTADVILFVVDAGVYGQADQQVLDLIPENVPTILVVNKT 128 Query: 138 DRSKDKSVLMPFAQEVASQHNFASVVPVSAKQRFQLDSLQEEIRKLLPVNPPMFDEDDIT 197 D+ K+K+ L+PFA+++A+ +FA++VPVSA+QRFQL+ L+EEIR LLP NPP F DD+T Sbjct: 129 DKVKEKAELIPFAEKLAALRDFAAIVPVSARQRFQLNRLEEEIRHLLPENPPFFSPDDVT 188 Query: 198 DRSEKFLASEIVREKVFRFVGEELPYTSTVLIEKFEQEGDLRRVFAAILVERDGHKSMVI 257 DRSE+F+A+EI+REK+FR+ G+ELPYTSTV+IE+FE++ + RVFAA+LVER+ HK+M+I Sbjct: 189 DRSERFMAAEIIREKIFRYTGDELPYTSTVVIEQFERKEKICRVFAAVLVEREAHKAMII 248 Query: 258 GNKG 261 G+KG Sbjct: 249 GHKG 252