BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0025.0042.p (226 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J1Z6.1 D8J1Z6_HERSS 3-isopropylmalate dehydratase small subuni... 410 e-113 F1VTW6.1 F1VTW6_9BURK 3-isopropylmalate dehydratase small subunit 391 e-107 A6T013.1 A6T013_JANMA 3-isopropylmalate dehydratase small subuni... 384 e-105 A4G4F6.1 A4G4F6_HERAR 3-isopropylmalate dehydratase small subuni... 376 e-102 B1FV14.1 B1FV14_9BURK 3-isopropylmalate dehydratase small subuni... 369 e-100 >D8J1Z6.1 D8J1Z6_HERSS 3-isopropylmalate dehydratase small subunit EC=4.2.1.33 Length = 215 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 187/215 (86%), Positives = 207/215 (96%) Query: 12 MNKFIVHDGLVAPLDRANVDTDAIIPKQFLKSIQRSGFGPNLFDEWRYLDHGEPGMDNSK 71 MNKFIVH+GLVAPLDRANVDTDAIIPKQFLKSI+RSGFGPNLFDEWRYLDHGEPGMDNSK Sbjct: 1 MNKFIVHEGLVAPLDRANVDTDAIIPKQFLKSIKRSGFGPNLFDEWRYLDHGEPGMDNSK 60 Query: 72 RPLNPDFVLNQARYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNC 131 RPLNPDFVLNQ RYQG+S+LL+RKNFGCGSSREHAPWALDQ+GFRAVIAPSFADIFFNNC Sbjct: 61 RPLNPDFVLNQERYQGSSILLSRKNFGCGSSREHAPWALDQFGFRAVIAPSFADIFFNNC 120 Query: 132 FKNGLLPIVLPEQQIDRLFDEVKAFPGFRLIIDLEKQVITTANGSQTYPFEVGEFRKYCL 191 +KNGLLPIVL EQQ+D LF+EVKAFPG+RL+IDLEKQ+++T NGSQTYPFE+ EFRKYCL Sbjct: 121 YKNGLLPIVLTEQQVDHLFNEVKAFPGYRLVIDLEKQIVSTTNGSQTYPFEISEFRKYCL 180 Query: 192 LNGLDDIGLTLRQADKIRAFEERHLFDQPWLANTI 226 LNG DDIGLTLR+AD IRA+EE+HL +QPWL+NTI Sbjct: 181 LNGFDDIGLTLRKADTIRAYEEKHLHEQPWLSNTI 215 >F1VTW6.1 F1VTW6_9BURK 3-isopropylmalate dehydratase small subunit Length = 215 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 182/215 (84%), Positives = 199/215 (92%) Query: 12 MNKFIVHDGLVAPLDRANVDTDAIIPKQFLKSIQRSGFGPNLFDEWRYLDHGEPGMDNSK 71 MNKF +HDGLVAPLDRANVDTDAIIPKQFLKSIQR+GFGPNLFDEWRYLDHGEPG DNS+ Sbjct: 1 MNKFNLHDGLVAPLDRANVDTDAIIPKQFLKSIQRTGFGPNLFDEWRYLDHGEPGRDNSR 60 Query: 72 RPLNPDFVLNQARYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNC 131 RPLNPDFVLNQ RY GAS+LL RKNFGCGSSREHAPWALDQYGFRA+IAPS+ADIFFNNC Sbjct: 61 RPLNPDFVLNQPRYTGASILLTRKNFGCGSSREHAPWALDQYGFRAIIAPSYADIFFNNC 120 Query: 132 FKNGLLPIVLPEQQIDRLFDEVKAFPGFRLIIDLEKQVITTANGSQTYPFEVGEFRKYCL 191 FKNGLLPIVL E QID LFDEV+AFPGFRL+IDLE+Q+++T NGS+++PFEV FRKYCL Sbjct: 121 FKNGLLPIVLTEAQIDHLFDEVRAFPGFRLVIDLERQLVSTTNGSESFPFEVDTFRKYCL 180 Query: 192 LNGLDDIGLTLRQADKIRAFEERHLFDQPWLANTI 226 NGLDDIGLTL+QADKIRAFEERHL +PWL N I Sbjct: 181 QNGLDDIGLTLQQADKIRAFEERHLAGKPWLTNAI 215 >A6T013.1 A6T013_JANMA 3-isopropylmalate dehydratase small subunit 1 EC=4.2.1.33 Length = 215 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 178/215 (82%), Positives = 197/215 (91%) Query: 12 MNKFIVHDGLVAPLDRANVDTDAIIPKQFLKSIQRSGFGPNLFDEWRYLDHGEPGMDNSK 71 M+KF + +GLVAPLDRANVDTDAIIPKQFLKSI+R+GFGPNLFDEWRYLD GEPG DNS Sbjct: 1 MDKFTILNGLVAPLDRANVDTDAIIPKQFLKSIKRTGFGPNLFDEWRYLDQGEPGKDNSN 60 Query: 72 RPLNPDFVLNQARYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNC 131 RPLNPDFVLNQ+RYQGAS+LLARKNFGCGSSREHAPWAL QYGFRA++APSFADIFFNNC Sbjct: 61 RPLNPDFVLNQSRYQGASILLARKNFGCGSSREHAPWALSQYGFRAIVAPSFADIFFNNC 120 Query: 132 FKNGLLPIVLPEQQIDRLFDEVKAFPGFRLIIDLEKQVITTANGSQTYPFEVGEFRKYCL 191 +KNGLLP+ L E Q+D LF+EVKAFPGF L+IDLEKQVI T+NGS TYPFE+ FRKYCL Sbjct: 121 YKNGLLPVALSEAQVDHLFNEVKAFPGFHLVIDLEKQVIGTSNGSVTYPFEIDAFRKYCL 180 Query: 192 LNGLDDIGLTLRQADKIRAFEERHLFDQPWLANTI 226 LNG DDIGLTL++ADKIRAFEERHL QPWL+NTI Sbjct: 181 LNGFDDIGLTLQKADKIRAFEERHLAAQPWLSNTI 215 >A4G4F6.1 A4G4F6_HERAR 3-isopropylmalate dehydratase small subunit 2 EC=4.2.1.33 Length = 215 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/215 (80%), Positives = 193/215 (89%) Query: 12 MNKFIVHDGLVAPLDRANVDTDAIIPKQFLKSIQRSGFGPNLFDEWRYLDHGEPGMDNSK 71 M KF + DGLVAPLDRANVDTDAIIPKQFLKSI+R+GFGPNLFDEWRYLD GEPG DN+ Sbjct: 1 MEKFNILDGLVAPLDRANVDTDAIIPKQFLKSIKRTGFGPNLFDEWRYLDQGEPGKDNTN 60 Query: 72 RPLNPDFVLNQARYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNC 131 RPLNPDFVLNQ RYQGA +LLARKNFGCGSSREHAPWAL QYGFRA++APSFADIFFNNC Sbjct: 61 RPLNPDFVLNQPRYQGAQILLARKNFGCGSSREHAPWALSQYGFRAIVAPSFADIFFNNC 120 Query: 132 FKNGLLPIVLPEQQIDRLFDEVKAFPGFRLIIDLEKQVITTANGSQTYPFEVGEFRKYCL 191 +KNGLLP+ L E Q+D LF+EVKAFPGF L+IDLEKQ+I T+NGS YPF++ FRKYCL Sbjct: 121 YKNGLLPVTLTEAQVDHLFNEVKAFPGFHLVIDLEKQIIATSNGSVAYPFDIDAFRKYCL 180 Query: 192 LNGLDDIGLTLRQADKIRAFEERHLFDQPWLANTI 226 LNG DDIGLTL++ADKIRA+EERHL QPWL+NTI Sbjct: 181 LNGFDDIGLTLQKADKIRAYEERHLAAQPWLSNTI 215 >B1FV14.1 B1FV14_9BURK 3-isopropylmalate dehydratase small subunit 1 EC=4.2.1.33 Length = 217 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/215 (80%), Positives = 188/215 (87%) Query: 12 MNKFIVHDGLVAPLDRANVDTDAIIPKQFLKSIQRSGFGPNLFDEWRYLDHGEPGMDNSK 71 M+KFIVH G+VAPLDR NVDTDAIIPKQFLKSI+R+GFGPN FDEWRYLDHGEPG DNSK Sbjct: 1 MDKFIVHTGVVAPLDRENVDTDAIIPKQFLKSIKRTGFGPNAFDEWRYLDHGEPGQDNSK 60 Query: 72 RPLNPDFVLNQARYQGASVLLARKNFGCGSSREHAPWALDQYGFRAVIAPSFADIFFNNC 131 RPLNPDFVLNQ RYQGASVLLARKNFGCGSSREHAPWAL QYGFRA+IAPSFADIF+NNC Sbjct: 61 RPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALQQYGFRAIIAPSFADIFYNNC 120 Query: 132 FKNGLLPIVLPEQQIDRLFDEVKAFPGFRLIIDLEKQVITTANGSQTYPFEVGEFRKYCL 191 FKNGLLPIVL EQQ+D LF+E AF GF+L IDL+KQV+ TA+G YPFEV FRKYCL Sbjct: 121 FKNGLLPIVLTEQQVDHLFNETYAFNGFQLTIDLDKQVVRTADGGTEYPFEVAAFRKYCL 180 Query: 192 LNGLDDIGLTLRQADKIRAFEERHLFDQPWLANTI 226 LNG DDIGLTLR ADKIR FE + QPWLA+ I Sbjct: 181 LNGFDDIGLTLRHADKIRQFEAERIAKQPWLAHRI 215