BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0024.0046.p         (236 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D8IZX0.1 D8IZX0_HERSS Succinate dehydrogenase Fe-S subunit prote...   471   e-131
A2RQ46.1 A2RQ46_HERSE Succinate dehydrogenase Fe-S protein subun...   471   e-131
A6SY52.1 A6SY52_JANMA Succinate dehydrogenase iron-sulfur protei...   441   e-122
A4G5Z4.1 A4G5Z4_HERAR Succinate dehydrogenase (Ubiquinone), Fe-S...   441   e-122
F1VWI5.1 F1VWI5_9BURK Succinate dehydrogenase iron-sulfur protein     439   e-121

>D8IZX0.1 D8IZX0_HERSS Succinate dehydrogenase Fe-S subunit protein
           EC=1.3.99.1
          Length = 236

 Score =  471 bits (1212), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/236 (97%), Positives = 233/236 (98%)

Query: 1   MTRTLKFKIYRYDPDKDEKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60
           MTRTLKFKIYRYDPDKD+KPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG
Sbjct: 1   MTRTLKFKIYRYDPDKDDKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60

Query: 61  VCGSDAMNINGKNGLACTTNLNELSEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120
           VCGSDAMNINGKNGLAC TNLNEL+EPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL
Sbjct: 61  VCGSDAMNINGKNGLACITNLNELTEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120

Query: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180
           INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
Sbjct: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180

Query: 181 ADSRDEATGQRLDDLEDPYRLFRCRSIMNCVDVCPKGLNPNAAIGKIKELMVRRAV 236
           ADSRDEATG RLD+LEDPYRLFRCRSIMNCVDVCPKGLNPN AIGKIKELMVRR+V
Sbjct: 181 ADSRDEATGARLDNLEDPYRLFRCRSIMNCVDVCPKGLNPNKAIGKIKELMVRRSV 236


>A2RQ46.1 A2RQ46_HERSE Succinate dehydrogenase Fe-S protein subunit protein
          Length = 236

 Score =  471 bits (1212), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/236 (97%), Positives = 233/236 (98%)

Query: 1   MTRTLKFKIYRYDPDKDEKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60
           MTRTLKFKIYRYDPDKD+KPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG
Sbjct: 1   MTRTLKFKIYRYDPDKDDKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60

Query: 61  VCGSDAMNINGKNGLACTTNLNELSEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120
           VCGSDAMNINGKNGLAC TNLNEL+EPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL
Sbjct: 61  VCGSDAMNINGKNGLACITNLNELTEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120

Query: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180
           INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
Sbjct: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180

Query: 181 ADSRDEATGQRLDDLEDPYRLFRCRSIMNCVDVCPKGLNPNAAIGKIKELMVRRAV 236
           ADSRDEATG RLD+LEDPYRLFRCRSIMNCVDVCPKGLNPN AIGKIKELMVRR+V
Sbjct: 181 ADSRDEATGARLDNLEDPYRLFRCRSIMNCVDVCPKGLNPNKAIGKIKELMVRRSV 236


>A6SY52.1 A6SY52_JANMA Succinate dehydrogenase iron-sulfur protein
           EC=1.3.99.1
          Length = 236

 Score =  441 bits (1133), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 222/236 (94%)

Query: 1   MTRTLKFKIYRYDPDKDEKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60
           M RTL+ +IYRYDPDKD KPYMQD+TVEL   DKMLLDALQRIK+ VDDSLALRRSCREG
Sbjct: 1   MARTLRLQIYRYDPDKDAKPYMQDVTVELHDHDKMLLDALQRIKATVDDSLALRRSCREG 60

Query: 61  VCGSDAMNINGKNGLACTTNLNELSEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120
           VCGSDAMNINGKNGLACTTNLNEL+EPIVL+PLPGLPVIRDLIVDMT FFKQYDSIKP+L
Sbjct: 61  VCGSDAMNINGKNGLACTTNLNELTEPIVLRPLPGLPVIRDLIVDMTQFFKQYDSIKPFL 120

Query: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180
           IND+IPPEKERLQ+P +REELDG+YECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
Sbjct: 121 INDTIPPEKERLQTPAEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180

Query: 181 ADSRDEATGQRLDDLEDPYRLFRCRSIMNCVDVCPKGLNPNAAIGKIKELMVRRAV 236
           ADSRD ATG RLD+LEDPYRLFRC +IMNCVDVCPKGLNP  AIGKIKELMVRRAV
Sbjct: 181 ADSRDHATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELMVRRAV 236


>A4G5Z4.1 A4G5Z4_HERAR Succinate dehydrogenase (Ubiquinone), Fe-S protein
           EC=1.3.5.1
          Length = 236

 Score =  441 bits (1133), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 208/236 (88%), Positives = 224/236 (94%)

Query: 1   MTRTLKFKIYRYDPDKDEKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60
           M RTL+ +IYRYDPDKD KPYMQD+TVEL   DKMLLDALQRIK+DVDD+L+LRRSCREG
Sbjct: 1   MARTLRLQIYRYDPDKDAKPYMQDVTVELHDHDKMLLDALQRIKADVDDTLSLRRSCREG 60

Query: 61  VCGSDAMNINGKNGLACTTNLNELSEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120
           VCGSDAMNINGKNGLACTTNLNEL+EPIVL+PLPGLPVIRDLIVDMT FFKQYDSIKP+L
Sbjct: 61  VCGSDAMNINGKNGLACTTNLNELTEPIVLRPLPGLPVIRDLIVDMTQFFKQYDSIKPFL 120

Query: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180
           IND+IPPEKERLQ+P +REELDG+YECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
Sbjct: 121 INDTIPPEKERLQTPAEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180

Query: 181 ADSRDEATGQRLDDLEDPYRLFRCRSIMNCVDVCPKGLNPNAAIGKIKELMVRRAV 236
           ADSRDEATG RLD+LEDPYRLFRC +IMNCVDVCPKGLNP  AIGKIKEL+VRRAV
Sbjct: 181 ADSRDEATGARLDNLEDPYRLFRCHTIMNCVDVCPKGLNPTRAIGKIKELLVRRAV 236


>F1VWI5.1 F1VWI5_9BURK Succinate dehydrogenase iron-sulfur protein
          Length = 236

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/236 (88%), Positives = 223/236 (94%)

Query: 1   MTRTLKFKIYRYDPDKDEKPYMQDLTVELKPTDKMLLDALQRIKSDVDDSLALRRSCREG 60
           M RTL F+IYRYDPDKD KPYMQ LTVEL+ TDKMLLDALQRIK+DVDDSLALRRSCREG
Sbjct: 1   MPRTLNFEIYRYDPDKDAKPYMQKLTVELQDTDKMLLDALQRIKADVDDSLALRRSCREG 60

Query: 61  VCGSDAMNINGKNGLACTTNLNELSEPIVLKPLPGLPVIRDLIVDMTNFFKQYDSIKPYL 120
           VCGSDAMNINGKNGLACTTNL EL +PIVL+PLPGLPVIRDLIVDMT FFKQY+SIKP+L
Sbjct: 61  VCGSDAMNINGKNGLACTTNLKELKQPIVLRPLPGLPVIRDLIVDMTQFFKQYNSIKPFL 120

Query: 121 INDSIPPEKERLQSPEQREELDGVYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180
           IN +IPPEKERLQSP +REELDG+YECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI
Sbjct: 121 INTTIPPEKERLQSPTEREELDGLYECILCACCSTSCPSFWWNPDKFVGPAGLLQAYRFI 180

Query: 181 ADSRDEATGQRLDDLEDPYRLFRCRSIMNCVDVCPKGLNPNAAIGKIKELMVRRAV 236
           AD+RDEAT +RLD+LEDPYRLFRC SIMNCVDVCPKGLNPN AIGKIKE+MVRRAV
Sbjct: 181 ADTRDEATAERLDNLEDPYRLFRCHSIMNCVDVCPKGLNPNKAIGKIKEMMVRRAV 236