BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0043.p (267 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IZX3.1 D8IZX3_HERSS GntR family transcription regulator protein 465 e-129 A4G5Z8.1 A4G5Z8_HERAR Transcriptional regulator, GntR family 372 e-101 A6SY48.1 A6SY48_JANMA Transcriptional regulator, GntR family 367 1e-99 F1VWI1.1 F1VWI1_9BURK Transcriptional regulator, GntR family 359 3e-97 Q3JKF0.1 Q3JKF0_BURP1 Transcriptional regulator, GntR family 348 6e-94 >D8IZX3.1 D8IZX3_HERSS GntR family transcription regulator protein Length = 334 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/267 (85%), Positives = 243/267 (91%), Gaps = 6/267 (2%) Query: 1 MSSSLPNSNNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELIP 60 MSS LPNSNN+DA + G VA APTFSPLYQQIKA LI QRLE+GEWKPGELIP Sbjct: 74 MSSILPNSNNADAHAAGAGVASPAPTFSPLYQQIKA------LIMQRLEAGEWKPGELIP 127 Query: 61 SEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTDV 120 SEVELG+RFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHET AQFRFLRL AD+D Sbjct: 128 SEVELGSRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETQAQFRFLRLMADSDE 187 Query: 121 PQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKG 180 PQR ENKIIEVKRVRA AEVARQLDMKSGDSVIFI+RVKSFNGVP ILE+IWLPG IFKG Sbjct: 188 PQRPENKIIEVKRVRASAEVARQLDMKSGDSVIFIRRVKSFNGVPIILEDIWLPGAIFKG 247 Query: 181 LTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRAS 240 LTAERL+EY+GPLYGLFE+EFGTRMIRAEE+IRAVGADP++AE LGV PQTPLLSV+RAS Sbjct: 248 LTAERLVEYRGPLYGLFESEFGTRMIRAEERIRAVGADPDAAEFLGVTPQTPLLSVERAS 307 Query: 241 FTYGDKPVEMRRGLYLTLNYHYQSELN 267 FTYGDKPVEMRRGLYLT N+HYQSEL+ Sbjct: 308 FTYGDKPVEMRRGLYLTTNHHYQSELS 334 >A4G5Z8.1 A4G5Z8_HERAR Transcriptional regulator, GntR family Length = 312 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/268 (67%), Positives = 217/268 (80%), Gaps = 7/268 (2%) Query: 1 MSSSLPN-SNNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELI 59 MSSS P+ S + AQ+ G S +PTFSPLYQQIKA LIT+ L+SGEW+PGELI Sbjct: 51 MSSSHPSLSIANPAQAAGASATVPSPTFSPLYQQIKA------LITKSLQSGEWRPGELI 104 Query: 60 PSEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTD 119 PSE+EL NRFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE AQFRFLRL D Sbjct: 105 PSEIELANRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVG 164 Query: 120 VPQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFK 179 Q EN + E +R+RAPA++ARQLD+K+GDSV F+KR++SF+G PTILEE+WLPG IFK Sbjct: 165 DAQYPENTVTEARRLRAPADIARQLDIKTGDSVFFVKRIQSFDGAPTILEELWLPGSIFK 224 Query: 180 GLTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRA 239 GL+ ER+++YKGP+Y L ETEFG +MIRA E IRAV AD +AELL +P TPLLSV+R Sbjct: 225 GLSLERVLQYKGPMYALLETEFGIQMIRAVENIRAVVADQSAAELLMLPLNTPLLSVNRV 284 Query: 240 SFTYGDKPVEMRRGLYLTLNYHYQSELN 267 SFTYGDK VE+RR LY+T N+HYQ+EL+ Sbjct: 285 SFTYGDKAVEVRRSLYVTNNHHYQNELS 312 >A6SY48.1 A6SY48_JANMA Transcriptional regulator, GntR family Length = 284 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 182/267 (68%), Positives = 216/267 (80%), Gaps = 10/267 (3%) Query: 3 SSLPNS--NNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELIP 60 SS P + NN+ A S G A +PTFSPLYQQIKA LIT+ L+SGEW+PGELIP Sbjct: 26 SSAPTTLPNNNAAGSAGG--ATPSPTFSPLYQQIKA------LITRSLQSGEWRPGELIP 77 Query: 61 SEVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTDV 120 SEVEL RFKVSQGTVRKAIDEL+AENLVVRRQGKGTFVATHHE AQFRFLRL D Sbjct: 78 SEVELATRFKVSQGTVRKAIDELSAENLVVRRQGKGTFVATHHEARAQFRFLRLKPDVGE 137 Query: 121 PQRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKG 180 P +N II+ KR+RAPA++ARQLD+K+GDSV+F+KRV+SF+G PTILEE+WLPG IFKG Sbjct: 138 PLYPDNTIIDAKRLRAPADIARQLDIKTGDSVVFLKRVQSFDGAPTILEELWLPGTIFKG 197 Query: 181 LTAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRAS 240 L+ ER+++YKGP+Y L ETEFGT+MIRA E I+AV AD +A+LL +P TPLLSV R S Sbjct: 198 LSVERVLQYKGPMYALLETEFGTQMIRAVENIKAVVADQVTADLLSLPLNTPLLSVTRVS 257 Query: 241 FTYGDKPVEMRRGLYLTLNYHYQSELN 267 FTYGDKPVE+RR Y+T N+HY++ELN Sbjct: 258 FTYGDKPVEVRRSYYVTNNHHYRNELN 284 >F1VWI1.1 F1VWI1_9BURK Transcriptional regulator, GntR family Length = 258 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 180/240 (75%), Positives = 199/240 (82%), Gaps = 6/240 (2%) Query: 27 FSPLYQQIKAFRHXKALITQRLESGEWKPGELIPSEVELGNRFKVSQGTVRKAIDELAAE 86 FSPLYQQIKA LIT L++GEWKPGELIPSEVEL RFKVSQGTVRKAIDEL++E Sbjct: 24 FSPLYQQIKA------LITASLQAGEWKPGELIPSEVELAGRFKVSQGTVRKAIDELSSE 77 Query: 87 NLVVRRQGKGTFVATHHETHAQFRFLRLTADTDVPQRAENKIIEVKRVRAPAEVARQLDM 146 NLVVRRQGKGTFVATHHE AQFRFLRL D V +A+N IIEVKR RAPA+VAR LD+ Sbjct: 78 NLVVRRQGKGTFVATHHEVRAQFRFLRLMPDAGVAHQADNLIIEVKRQRAPADVARLLDI 137 Query: 147 KSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKGLTAERLMEYKGPLYGLFETEFGTRMI 206 K D+VIFIKRV+SF G P ILEE+WLPG IFKGLTAERL+EYKGP+YGLFETEFGTRMI Sbjct: 138 KPADAVIFIKRVQSFEGAPAILEELWLPGTIFKGLTAERLVEYKGPMYGLFETEFGTRMI 197 Query: 207 RAEEQIRAVGADPESAELLGVPPQTPLLSVDRASFTYGDKPVEMRRGLYLTLNYHYQSEL 266 RA E+IRAV AD + L V TPLLSV+R SFTYGDKPVE+RRGLY T ++HYQSEL Sbjct: 198 RATEKIRAVHADHVACGWLQVVTDTPLLSVERVSFTYGDKPVEVRRGLYRTDSHHYQSEL 257 >Q3JKF0.1 Q3JKF0_BURP1 Transcriptional regulator, GntR family Length = 376 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 167/266 (62%), Positives = 208/266 (78%), Gaps = 6/266 (2%) Query: 2 SSSLPNSNNSDAQSVGTSVAGAAPTFSPLYQQIKAFRHXKALITQRLESGEWKPGELIPS 61 S+ PN Q G + A +PTFSPLY+QIKA LITQ LE+GEWKPGE+IPS Sbjct: 117 SAPNPNGQAGSTQPGGEAAAAPSPTFSPLYRQIKA------LITQSLEAGEWKPGEIIPS 170 Query: 62 EVELGNRFKVSQGTVRKAIDELAAENLVVRRQGKGTFVATHHETHAQFRFLRLTADTDVP 121 EVEL R+KVSQGTVRKAIDELAA+NL+VRRQGKGTFVATH E AQFRFLRL AD Sbjct: 171 EVELAGRYKVSQGTVRKAIDELAADNLLVRRQGKGTFVATHSEERAQFRFLRLLADDGAE 230 Query: 122 QRAENKIIEVKRVRAPAEVARQLDMKSGDSVIFIKRVKSFNGVPTILEEIWLPGLIFKGL 181 ++++E +R+RAPAE+ARQLD+K D V+ ++RV F+GV T+L+EIWLPG +F+GL Sbjct: 231 HPHVSRLLECRRMRAPAEIARQLDLKPADPVVQVRRVLEFDGVDTVLDEIWLPGAMFRGL 290 Query: 182 TAERLMEYKGPLYGLFETEFGTRMIRAEEQIRAVGADPESAELLGVPPQTPLLSVDRASF 241 T ERL EYKGPLY +FE+EFGTRMIRA E+IRA+ A+P A++L VPP PLLSV+R S+ Sbjct: 291 TFERLSEYKGPLYAMFESEFGTRMIRASEKIRAIAAEPAVADVLRVPPGFPLLSVERVSY 350 Query: 242 TYGDKPVEMRRGLYLTLNYHYQSELN 267 TYGD+PVE+RRG Y+T Y+YQ++L+ Sbjct: 351 TYGDRPVEVRRGWYVTTGYYYQNDLS 376