BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0011.p (266 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8J0D6.1 D8J0D6_HERSS Transmembrane protein 482 e-134 A6SXT5.1 A6SXT5_JANMA Competence lipoprotein ComL 395 e-108 F1VVL3.1 F1VVL3_9BURK Putative component of the lipoprotein asse... 391 e-107 A4G6E0.1 A4G6E0_HERAR Competence lipoprotein ComL 382 e-104 C7RM95.1 C7RM95_ACCPU Outer membrane assembly lipoprotein YfiO 350 1e-94 >D8J0D6.1 D8J0D6_HERSS Transmembrane protein Length = 266 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 222/266 (83%), Positives = 247/266 (92%) Query: 1 MQKILLKLLTVAFILSLSACGLLPEQKDETIGWSASKLYSEAKEELTAGGYEKSIKYFEK 60 M KILLK + F LSL+ACGLLPEQKDET GWSA+KLYSEAK+EL AGGY+K+IKYFEK Sbjct: 1 MHKILLKFFIIGFALSLTACGLLPEQKDETTGWSAAKLYSEAKDELNAGGYDKAIKYFEK 60 Query: 61 LESRYPFGTYAQQAQMDIAYAYYRLNDQPQGLAAVDRFIKLHPNHPNVDYMYYLRGLINF 120 LESRYPFGTYAQQAQMDIAYAYYR N+Q QGLAAVDRFIKLHPNHPNVDYMYYLRGLINF Sbjct: 61 LESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAVDRFIKLHPNHPNVDYMYYLRGLINF 120 Query: 121 NDRTSIFDTFTDQDNTERDPKAVRDAFDSFKLLAERFPDSTYTPDALLRMKYLVNSMAQY 180 NDRTSIFDTFTDQDNTERDPKA+RDAFDSFKLLAERFPDS YTPDA+ RMKYLVN+M+QY Sbjct: 121 NDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLAERFPDSKYTPDAIARMKYLVNAMSQY 180 Query: 181 DVHVANYYLRRGAYVSAVNRAQAAVKEYPDAPAVEEALFIMMRAYEAMGQKQLRDDTERV 240 DVHVA+YY RRGAYVSA NRAQ+A+K+YPD+PA EEALFI+MR+YEA+GQ +L++DTER+ Sbjct: 181 DVHVASYYFRRGAYVSAANRAQSAIKQYPDSPANEEALFILMRSYEALGQTKLKEDTERI 240 Query: 241 IQATYPNSPYYTGGPKAKDKPWWKIW 266 IQATYPNSP+Y GGPK K KPWWK+W Sbjct: 241 IQATYPNSPWYNGGPKPKSKPWWKLW 266 >A6SXT5.1 A6SXT5_JANMA Competence lipoprotein ComL Length = 261 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 185/262 (70%), Positives = 216/262 (82%), Gaps = 1/262 (0%) Query: 5 LLKLLTVAFILSLSACGLLPEQKDETIGWSASKLYSEAKEELTAGGYEKSIKYFEKLESR 64 +LK+ VA LSAC L P++ DET WS SKLYSEA+EE+ G Y K++ +FEKLESR Sbjct: 1 MLKITIVALAFLLSACSLTPDKFDETKNWSPSKLYSEAREEMNVGDYAKAVSHFEKLESR 60 Query: 65 YPFGTYAQQAQMDIAYAYYRLNDQPQGLAAVDRFIKLHPNHPNVDYMYYLRGLINFNDRT 124 YPFGTYAQQAQM+IAYAYYR DQPQ LAAV+RFIKLHP+HPNVDYMYYLRGLINFND+ Sbjct: 61 YPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKV 120 Query: 125 SIFDTFTDQDNTERDPKAVRDAFDSFKLLAERFPDSTYTPDALLRMKYLVNSMAQYDVHV 184 SIFD + QD TERDPKA R+AFDSFKLL ERFPDS YTPDA R+ YLVN MAQYDVHV Sbjct: 121 SIFDFVSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDATARLAYLVNGMAQYDVHV 180 Query: 185 ANYYLRRGAYVSAVNRAQAAVKEYPDAPAVEEALFIMMRAYEAMGQKQLRDDTERVIQAT 244 ANYY RRGAY++AVNRAQ+AVK YP APAVE AL++M+R+Y+A+ QLRDD ERV++ Sbjct: 181 ANYYYRRGAYLAAVNRAQSAVKNYPGAPAVEGALYVMIRSYDALNLPQLRDDAERVMKTN 240 Query: 245 YPNSPYYTGGPKAKDKPWWKIW 266 +P+S Y+ GGPK KD PWWK+W Sbjct: 241 FPDSVYFRGGPK-KDDPWWKVW 261 >F1VVL3.1 F1VVL3_9BURK Putative component of the lipoprotein assembly complex (Forms a complex with YaeT, YfgL, and NlpB) Length = 265 Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust. Identities = 180/266 (67%), Positives = 218/266 (81%), Gaps = 1/266 (0%) Query: 1 MQKILLKLLTVAFILSLSACGLLPEQKDETIGWSASKLYSEAKEELTAGGYEKSIKYFEK 60 M+ LLK +A + ++SACGLLPE+ DET WSA+KLY+EA++E++ G YE IKY+E+ Sbjct: 1 MRNKLLKCAALALVFTISACGLLPEKIDETKNWSAAKLYAEARDEISTGNYETGIKYYER 60 Query: 61 LESRYPFGTYAQQAQMDIAYAYYRLNDQPQGLAAVDRFIKLHPNHPNVDYMYYLRGLINF 120 LESRYPFGT+AQQAQM++AYAYYR +DQ Q LAAV+RFIKLHPNHPNVDYMYYLRGLINF Sbjct: 61 LESRYPFGTFAQQAQMEVAYAYYRQSDQAQALAAVERFIKLHPNHPNVDYMYYLRGLINF 120 Query: 121 NDRTSIFDTFTDQDNTERDPKAVRDAFDSFKLLAERFPDSTYTPDALLRMKYLVNSMAQY 180 ND+ +FD + QD TERDPKA +AF+SFK L ERFPDS Y DA LRMKYLVN++AQ+ Sbjct: 121 NDKLGLFDFVSRQDATERDPKAAHEAFESFKQLVERFPDSIYAADARLRMKYLVNAIAQH 180 Query: 181 DVHVANYYLRRGAYVSAVNRAQAAVKEYPDAPAVEEALFIMMRAYEAMGQKQLRDDTERV 240 +VHVANYY RRGAYV+AVNRAQ AVKEYP APA EEALF+M R+Y+ +G +LRDD RV Sbjct: 181 EVHVANYYFRRGAYVAAVNRAQFAVKEYPTAPATEEALFVMTRSYDELGMPELRDDAGRV 240 Query: 241 IQATYPNSPYYTGGPKAKDKPWWKIW 266 ++ +PNS YY GGPK + PWWKIW Sbjct: 241 MKQNFPNSVYYRGGPK-DNAPWWKIW 265 >A4G6E0.1 A4G6E0_HERAR Competence lipoprotein ComL Length = 261 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/262 (70%), Positives = 217/262 (82%), Gaps = 1/262 (0%) Query: 5 LLKLLTVAFILSLSACGLLPEQKDETIGWSASKLYSEAKEELTAGGYEKSIKYFEKLESR 64 +LKL +A LSAC L P+Q DET WS SKLYSEA+EE+ G YEK++ +FEKLESR Sbjct: 1 MLKLTYIALAFLLSACSLTPDQIDETKNWSPSKLYSEAREEMNTGNYEKAVSHFEKLESR 60 Query: 65 YPFGTYAQQAQMDIAYAYYRLNDQPQGLAAVDRFIKLHPNHPNVDYMYYLRGLINFNDRT 124 YPFGTYAQQAQM+IAYAYYR DQPQ LAAV+RFIKLHP+HPNVDYMYYLRGLINFND+ Sbjct: 61 YPFGTYAQQAQMEIAYAYYRQGDQPQALAAVERFIKLHPDHPNVDYMYYLRGLINFNDKV 120 Query: 125 SIFDTFTDQDNTERDPKAVRDAFDSFKLLAERFPDSTYTPDALLRMKYLVNSMAQYDVHV 184 S+FD + QD TERDPKA R+AFDSFKLL ERFPDS YTPDA R+ YLVN+MAQYDVHV Sbjct: 121 SVFDFLSRQDPTERDPKAAREAFDSFKLLTERFPDSKYTPDASARLAYLVNAMAQYDVHV 180 Query: 185 ANYYLRRGAYVSAVNRAQAAVKEYPDAPAVEEALFIMMRAYEAMGQKQLRDDTERVIQAT 244 ANYY RRGAY++A NRAQAAVK YP APA E AL++M+++Y+A+ QLRDD ERV++ Sbjct: 181 ANYYYRRGAYLAAANRAQAAVKNYPGAPAAEGALYVMIQSYDALNLPQLRDDAERVMKTN 240 Query: 245 YPNSPYYTGGPKAKDKPWWKIW 266 +PNS Y+ GGPK KDKPWW+IW Sbjct: 241 FPNSVYFHGGPK-KDKPWWQIW 261 >C7RM95.1 C7RM95_ACCPU Outer membrane assembly lipoprotein YfiO Length = 264 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 162/248 (65%), Positives = 200/248 (80%), Gaps = 1/248 (0%) Query: 19 ACGLLPEQKDETIGWSASKLYSEAKEELTAGGYEKSIKYFEKLESRYPFGTYAQQAQMDI 78 CGLLP +KDETIGWSA+KLY+EAK+ L G Y K+IKYFEKLESRYP+G YAQQAQ++I Sbjct: 18 GCGLLPAEKDETIGWSANKLYAEAKDALNDGSYAKAIKYFEKLESRYPYGRYAQQAQIEI 77 Query: 79 AYAYYRLNDQPQGLAAVDRFIKLHPNHPNVDYMYYLRGLINFNDRTSIFDTFTDQDNTER 138 AYAY++ + +AA DRFIKLHPNHPNVDY+YYLRGLINFN+ I T ++QD TER Sbjct: 78 AYAYWKDQEPASAVAACDRFIKLHPNHPNVDYVYYLRGLINFNEDLGIMGTISNQDMTER 137 Query: 139 DPKAVRDAFDSFKLLAERFPDSTYTPDALLRMKYLVNSMAQYDVHVANYYLRRGAYVSAV 198 DPK R++FD+F+ L RFPDS YTPDALLRMKYLVN++A ++HVA YY++RGAY++A Sbjct: 138 DPKGARESFDAFRELVTRFPDSKYTPDALLRMKYLVNALASLELHVARYYMKRGAYLAAA 197 Query: 199 NRAQAAVKEYPDAPAVEEALFIMMRAYEAMGQKQLRDDTERVIQATYPNSPYYTGGPKAK 258 NRAQ AVK YPDAPA EEALFIM++AY+++G LRDD ERV++ YPNS YY G + Sbjct: 198 NRAQYAVKNYPDAPATEEALFIMVKAYDSLGLNDLRDDAERVMRTNYPNSDYYRRGLDRR 257 Query: 259 DKPWWKIW 266 + PWWK+W Sbjct: 258 E-PWWKLW 264