BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0062.p (306 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8NLV5.1 D8NLV5_RALSO Glutamate/aspartate transport protein (ABC... 267 2e-69 D8NCD6.1 D8NCD6_RALSO Glutamate/aspartate transport protein (ABC... 265 4e-69 B5S6M5.1 B5S6M5_RALSO Amino-acid-binding periplasmic protein (Pbp) 265 9e-69 D8NW67.1 D8NW67_RALSO Glutamate/aspartate transport protein (ABC... 264 1e-68 Q8Y0S0.1 Q8Y0S0_RALSO Probable amino-acid-binding periplasmic (P... 263 3e-68 >D8NLV5.1 D8NLV5_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 303 Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 183/290 (63%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A A L++IR T V IAY +PF++ DK GY ++LC Sbjct: 14 LCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ+++V +R + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRTELKRPDLKVQYVQVTPSSRIPTILEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV + T + + + + R L++++ EV + DAF Sbjct: 134 AGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHADAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAFVM+DV L + + P +Y VVG+ +++EPY IM+ K DPEFK+ VD Sbjct: 194 MVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRTVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + + Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTSIILDYDAEKFYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >D8NCD6.1 D8NCD6_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 304 Score = 265 bits (678), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 131/291 (45%), Positives = 183/291 (62%), Gaps = 7/291 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFL-GDDKLVTGYTIELCR 74 LC +L + A A L++IR T V IAY +PF++ D K GYT++LC Sbjct: 14 LCTSLSIFSPGTALASATPVLDRIRDTGTVRIAYRESASPFSYYDADSKKPIGYTVDLCL 73 Query: 75 NIAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHF 134 + + LR ELK P ++VQ++ + TR A+ +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 RVVDKLRTELKRPDLKVQYVLITPSTRIPAIQEGKADLECSTTTNNRERREQVAFTIPHY 133 Query: 135 FAAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAF 194 A +RMLVK SGI W+DLR KTVV + T V L + + R L ++ EV + +AF Sbjct: 134 IAGIRMLVKTASGIHKWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEHAEAF 193 Query: 195 DSVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDL 254 VE GKADAFVM+DV L + + P++Y VVG+ +++EPY IM+ K DP+FK VD Sbjct: 194 AMVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKHTVDR 253 Query: 255 QMVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + ++Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 AMTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 304 >B5S6M5.1 B5S6M5_RALSO Amino-acid-binding periplasmic protein (Pbp) Length = 303 Score = 265 bits (676), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 182/290 (62%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A A L++IR T V IAY +PF++ DK GY ++LC Sbjct: 14 LCSSLSIVAPGTALASATPVLDRIRDTGTVRIAYRESASPFSYSDADKKPIGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ++ V +R + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRTELKRPDLKVQYVLVTPSSRIPTILEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV + T + + + + R L++++ EV + DAF Sbjct: 134 AGIRMLVKTSSGIHKWDDLRDKTVVSTKGTTSIAEMRRLNDSRVLHMKVEEVKEHADAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAFVM+DV L + + P +Y VVG+ +++EPY IM+ K DPEFK VD Sbjct: 194 MVESGKADAFVMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKHSVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + ++Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >D8NW67.1 D8NW67_RALSO Glutamate/aspartate transport protein (ABC superfamily, peri_bind) high affinity periplasmic solute-binding protein Length = 303 Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 129/290 (44%), Positives = 182/290 (62%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A A L++IR T V IA+ PF++ DK GY ++LC Sbjct: 14 LCSSLSIFAPGTALASATPVLDRIRDTGTVRIAHRESAAPFSYYDADKKPIGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ++ V TR + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRAELKRPDLKVQYVLVTPSTRIPTIMEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV+ + T V + + + R L+++I EV + +AF Sbjct: 134 AGIRMLVKTSSGIHKWDDLRNKTVVLTKGTTSVTEMRKLNDSRVLHMKIEEVKEHAEAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAF M+DV L + + P +Y VVG+ +++EPY IM+ K DPEFK+ VD Sbjct: 194 MVESGKADAFAMDDVQLYSFRANAKHPMDYTVVGDMMTVEPYAIMLSKSDPEFKRVVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + ++Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303 >Q8Y0S0.1 Q8Y0S0_RALSO Probable amino-acid-binding periplasmic (Pbp) abc transporter protein Length = 303 Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 128/290 (44%), Positives = 181/290 (62%), Gaps = 6/290 (2%) Query: 22 LCMALQM------QARAEGTLEKIRRTNAVVIAYLNGTTPFAFLGDDKLVTGYTIELCRN 75 LC +L + A L++IR T V IA+ +PF++ DK GY ++LC Sbjct: 14 LCTSLSIFSPGTALASTTPVLDRIRDTGIVRIAHRESASPFSYYDADKKPVGYAVDLCLR 73 Query: 76 IAEGLRKELKLPHMQVQFMEVDTVTRFIALDQGKADLECSTSTNNAERRKIAAFTVPHFF 135 + + LR ELK P ++VQ++ V TR + +GKADLECST+TNN ERR+ AFT+PH+ Sbjct: 74 VVDKLRTELKRPDLKVQYVLVTPSTRIPTIQEGKADLECSTTTNNRERREQVAFTIPHYI 133 Query: 136 AAVRMLVKKDSGIRNWEDLRGKTVVVPRNTPMVKLLEQRSKIRSLNVRIVEVAYNEDAFD 195 A +RMLVK SGI W+DLR KTVV + T V L + + R L ++ EV + +AF Sbjct: 134 AGIRMLVKTASGIHRWDDLRDKTVVSTKGTTSVAELRKMNDSRVLRIKFEEVKEHAEAFA 193 Query: 196 SVEKGKADAFVMEDVLLRRYLLSVPQPKNYQVVGEALSLEPYGIMMRKGDPEFKKFVDLQ 255 VE GKADAFVM+DV L + + P++Y VVG+ +++EPY IM+ K DP+FK+ VD Sbjct: 194 MVESGKADAFVMDDVQLYSFRANAKHPQDYTVVGDMMTVEPYAIMLSKSDPDFKRMVDRA 253 Query: 256 MVRIVRSGEIYRIYDRWFVQPISAKVPSMDMPMGFILRDTLRYPTDKVGD 305 M I+ + ++Y +WF QPI +DMPM F+LRD+ +YP+DKV D Sbjct: 254 MTAIILDYDAEKLYKKWFQQPIPPNSAKLDMPMNFLLRDSFKYPSDKVAD 303