BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0061.p (341 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8IRZ2.1 D8IRZ2_HERSS ABC-type glutamate/aspartate transport sys... 575 e-162 F1VZ16.1 F1VZ16_9BURK Glutamate Aspartate periplasmic binding pr... 470 e-130 A4Z0X2.1 A4Z0X2_BRASO Glutamate/aspartate ABC transporter (Subst... 364 9e-99 Q89D45.1 Q89D45_BRAJA ABC transporter amino-acid-binding protein 356 3e-96 B0UPE3.1 B0UPE3_METS4 Extracellular solute-binding protein family 3 353 2e-95 >D8IRZ2.1 D8IRZ2_HERSS ABC-type glutamate/aspartate transport system, periplasmic component protein Length = 315 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 283/315 (89%), Positives = 294/315 (93%) Query: 27 MKLLKFAGVLVGASVLMGSVHAEEFTGRLKKIKETGTLTLGVRDASIPFSYLDDKQSYQG 86 MKLLK AGVLVGASVLM SVHAEEFTGRLKKIK++GTLTLGVRD+SIPFSYLDDKQSYQG Sbjct: 1 MKLLKLAGVLVGASVLMSSVHAEEFTGRLKKIKDSGTLTLGVRDSSIPFSYLDDKQSYQG 60 Query: 87 YSIDLCLKAATAIQKKLGLTSLNVKMVPVTSATRIPLIANGTTDISCDSATNNMERQKQV 146 YSIDLCLKAATAIQKKLGLTSLN+KMVPVTSATRIPLIANGTTDISCDSATNN ER QV Sbjct: 61 YSIDLCLKAATAIQKKLGLTSLNIKMVPVTSATRIPLIANGTTDISCDSATNNQERWNQV 120 Query: 147 AFAVTEFVTANRFLTKKAANLKTLDDLKGKTIVSTSGTSNLKQITTLNTERNLGMNILAA 206 AF+VTEFVTAN+FL+KKAANLKTL+DLKGKT+VSTSGTSNLKQIT LN ERNLGMNILAA Sbjct: 121 AFSVTEFVTANKFLSKKAANLKTLEDLKGKTVVSTSGTSNLKQITALNAERNLGMNILAA 180 Query: 207 KDHAEAFLMVETGRAVAFVMDDILLSSLAANSKAPGDYVVSSEALSVEPYGLILPLGDAA 266 KDHAEAFLMVETGRA AFVMDDILLSSLAANSKAPGDY VSSEALSVEPYGLILP GD Sbjct: 181 KDHAEAFLMVETGRAAAFVMDDILLSSLAANSKAPGDYQVSSEALSVEPYGLILPKGDKE 240 Query: 267 FKKVVDDALVNVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVFAKPTDSGEPSA 326 FK VVDDAL VYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAV AKPTDS +P+A Sbjct: 241 FKTVVDDALTVVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVLAKPTDSYDPAA 300 Query: 327 YAAVPEAQKQSSKKK 341 YA VPEAQK KKK Sbjct: 301 YAVVPEAQKNMGKKK 315 >F1VZ16.1 F1VZ16_9BURK Glutamate Aspartate periplasmic binding protein gltI Length = 313 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 222/314 (70%), Positives = 271/314 (86%), Gaps = 1/314 (0%) Query: 27 MKLLKFAGVLVGASVLMGSVHAEEFTGRLKKIKETGTLTLGVRDASIPFSYLDDKQSYQG 86 MKL K VL+G+ ++ + A+E TG LKKIK++G +TLGVRD+SIPFSYLDDKQSYQG Sbjct: 1 MKLAKMMLVLIGSGLIASAAQAQE-TGTLKKIKDSGQITLGVRDSSIPFSYLDDKQSYQG 59 Query: 87 YSIDLCLKAATAIQKKLGLTSLNVKMVPVTSATRIPLIANGTTDISCDSATNNMERQKQV 146 YSID+C+K T+IQK+LG+TSLNVK+ PVTSATRIPL+ANGT D+ C SATNN+ERQKQV Sbjct: 60 YSIDICMKIVTSIQKELGMTSLNVKLNPVTSATRIPLMANGTVDLVCGSATNNIERQKQV 119 Query: 147 AFAVTEFVTANRFLTKKAANLKTLDDLKGKTIVSTSGTSNLKQITTLNTERNLGMNILAA 206 +FA T FVTANR L KK++N+KTLDD+KGK++VSTSGTSNLKQ+ LN +RNLGMN++ A Sbjct: 120 SFAPTTFVTANRLLAKKSSNIKTLDDMKGKSLVSTSGTSNLKQLVQLNGDRNLGMNVMTA 179 Query: 207 KDHAEAFLMVETGRAVAFVMDDILLSSLAANSKAPGDYVVSSEALSVEPYGLILPLGDAA 266 KDHAEAFLMVETGRAVAF MDDILL+SLAA+SK+P DY +++EALS EPYG++L D A Sbjct: 180 KDHAEAFLMVETGRAVAFGMDDILLASLAASSKSPADYSITTEALSTEPYGIMLRREDPA 239 Query: 267 FKKVVDDALVNVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVFAKPTDSGEPSA 326 FKK VD A++N++K DI +IYAKWFQSPIPPKG+NLN+PMS QL+AV A PTDSG+P+A Sbjct: 240 FKKSVDTAVINLFKSGDINRIYAKWFQSPIPPKGINLNIPMSDQLKAVIAHPTDSGDPAA 299 Query: 327 YAAVPEAQKQSSKK 340 YAAVPEAQK S+KK Sbjct: 300 YAAVPEAQKGSTKK 313 >A4Z0X2.1 A4Z0X2_BRASO Glutamate/aspartate ABC transporter (Substrate binding protein) Length = 304 Score = 364 bits (935), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 176/302 (58%), Positives = 227/302 (75%), Gaps = 1/302 (0%) Query: 27 MKLLKFAGVLVGASVLMGSVHAEEFTGRLKKIKETGTLTLGVRDASIPFSYLDDKQSYQG 86 MK L+ G+ A++ G V AE+ TG LK IKETG +TLGVRD+SIPFSYLDD Q G Sbjct: 1 MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60 Query: 87 YSIDLCLKAATAIQKKLGLTSLNVKMVPVTSATRIPLIANGTTDISCDSATNNMERQKQV 146 ++ID+C+ A++K+L L L VK+ PVTS+TRIPL+ANGT D+ C S TNN ERQKQ+ Sbjct: 61 FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQKQI 120 Query: 147 AFAVTEFVTANRFLTKKAANLKTLDDLKGKTIVSTSGTSNLKQITTLNTERNLGMNILAA 206 +F T F+TA+R+++KKA+N+ +DDLKGK +VST+GT+N+KQ+T N R LG+NI+ A Sbjct: 121 SFTNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINIIPA 180 Query: 207 KDHAEAFLMVETGRAVAFVMDDILLSSLAANSKAPGDYVVSSEALS-VEPYGLILPLGDA 265 KDHAEAFLMVET RAVAFVMDDILL+SL A+SK P YV+SS+A S EPYG++L D Sbjct: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKDDP 240 Query: 266 AFKKVVDDALVNVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVFAKPTDSGEPS 325 FKKVVD A +Y + K+Y KWF IPPKG+NLN P+S +L+A FAKP+DS +P Sbjct: 241 QFKKVVDAATAKIYTSGEGAKLYDKWFMQKIPPKGLNLNTPISAELKAEFAKPSDSPDPE 300 Query: 326 AY 327 +Y Sbjct: 301 SY 302 >Q89D45.1 Q89D45_BRAJA ABC transporter amino-acid-binding protein Length = 303 Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 174/302 (57%), Positives = 225/302 (74%), Gaps = 1/302 (0%) Query: 27 MKLLKFAGVLVGASVLMGSVHAEEFTGRLKKIKETGTLTLGVRDASIPFSYLDDKQSYQG 86 MK + G+ + A+ ++ A+E TG LK IK+TG +TLG RD+SIPFSYLDD Q G Sbjct: 1 MKHFRHIGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIG 60 Query: 87 YSIDLCLKAATAIQKKLGLTSLNVKMVPVTSATRIPLIANGTTDISCDSATNNMERQKQV 146 +++D+C K A++K+L L L VK+ PVTSATRIPL+ANGT D+ C S TNN +RQKQV Sbjct: 61 FAMDICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQV 120 Query: 147 AFAVTEFVTANRFLTKKAANLKTLDDLKGKTIVSTSGTSNLKQITTLNTERNLGMNILAA 206 AF T F+TA+R++ KK++ LK++DDLKGKT+VST+GT+N+KQ+T N + LG NI+ A Sbjct: 121 AFTNTHFLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANIIPA 180 Query: 207 KDHAEAFLMVETGRAVAFVMDDILLSSLAANSKAPGDYVVSSEALS-VEPYGLILPLGDA 265 KDHAE+FLMVET RAVAFVMDDILL+SL A SK+P DYV+S +A S EPYG++L DA Sbjct: 181 KDHAESFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 Query: 266 AFKKVVDDALVNVYKGDDIKKIYAKWFQSPIPPKGVNLNVPMSPQLQAVFAKPTDSGEPS 325 FKKVVD A +Y + +KIY KWF + IPPKG+NLN P+S +L+ FAKPTDS P Sbjct: 241 PFKKVVDAATAALYTSGEGQKIYEKWFTAKIPPKGLNLNTPISAELKNEFAKPTDSPNPD 300 Query: 326 AY 327 Y Sbjct: 301 DY 302 >B0UPE3.1 B0UPE3_METS4 Extracellular solute-binding protein family 3 Length = 301 Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 169/281 (60%), Positives = 214/281 (76%), Gaps = 1/281 (0%) Query: 48 AEEFTGRLKKIKETGTLTLGVRDASIPFSYLDDKQSYQGYSIDLCLKAATAIQKKLGLTS 107 AEE +G LKKIKETG +TLG RD+S+PFSYLD Q GY++D+C K A++ KLGL + Sbjct: 21 AEELSGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVGYAMDICYKVVDAVKAKLGLPN 80 Query: 108 LNVKMVPVTSATRIPLIANGTTDISCDSATNNMERQKQVAFAVTEFVTANRFLTKKAANL 167 L VK+ PVTSATRIPLIANGT D+ C S TNN++RQKQV+F T F+TA+RF+ KK++N+ Sbjct: 81 LEVKLNPVTSATRIPLIANGTVDLECGSTTNNVDRQKQVSFTNTHFLTASRFVAKKSSNV 140 Query: 168 KTLDDLKGKTIVSTSGTSNLKQITTLNTERNLGMNILAAKDHAEAFLMVETGRAVAFVMD 227 DDLKGKT+VSTSGT+N++QI N LG+ IL AKDHAEAFLMVETGRAVAFVMD Sbjct: 141 SKFDDLKGKTVVSTSGTTNIRQINEYNAANKLGITILPAKDHAEAFLMVETGRAVAFVMD 200 Query: 228 DILLSSLAANSKAPGDYVVSSEALS-VEPYGLILPLGDAAFKKVVDDALVNVYKGDDIKK 286 D+LL+SLAA+SK P Y++S++A+S EPYG++L DA FKKVVDDA Y+ + Sbjct: 201 DVLLASLAASSKEPDAYLISTDAISKPEPYGIMLRKDDAPFKKVVDDATAAFYQSPEGPA 260 Query: 287 IYAKWFQSPIPPKGVNLNVPMSPQLQAVFAKPTDSGEPSAY 327 Y KWF PIPP+ +NLN+PM L+ FAKP+DS +P+ Y Sbjct: 261 TYDKWFTKPIPPRNINLNLPMDAALKKAFAKPSDSPDPAMY 301