BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0023.0050.p         (130 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A4G1T3.1 RS9_HERAR 30S ribosomal protein S9                           255   2e-66
A6SUN8.1 RS9_JANMA 30S ribosomal protein S9                           252   1e-65
C3X6S7.1 C3X6S7_OXAFO 30S ribosomal protein S9                        246   6e-64
F1W177.1 F1W177_9BURK SSU ribosomal protein S9p (S16e)                246   7e-64
C3XD03.1 C3XD03_OXAFO 30S ribosomal protein S9                        243   9e-63

>A4G1T3.1 RS9_HERAR 30S ribosomal protein S9
          Length = 130

 Score =  255 bits (651), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 126/130 (96%), Positives = 129/130 (99%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIGNYNYGTGRRKSAVARVFIKSGSG+IVVNGKPANEYFSRETGLMVIRQPLELT+NVE 
Sbjct: 1   MIGNYNYGTGRRKSAVARVFIKSGSGQIVVNGKPANEYFSRETGLMVIRQPLELTNNVET 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDIMVNV+GGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK
Sbjct: 61  FDIMVNVNGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>A6SUN8.1 RS9_JANMA 30S ribosomal protein S9
          Length = 130

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/130 (96%), Positives = 128/130 (98%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIGNYNYGTGRRKSAVARVFIKSGSG+IVVNGKPANEYFSRETGLMVIRQPLELT+NVE 
Sbjct: 1   MIGNYNYGTGRRKSAVARVFIKSGSGQIVVNGKPANEYFSRETGLMVIRQPLELTNNVET 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDIMVNV+GGGESGQAGAVRHGITRALIDYDATLK ELSKAGFVTRDAREVERKKVGLRK
Sbjct: 61  FDIMVNVNGGGESGQAGAVRHGITRALIDYDATLKSELSKAGFVTRDAREVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>C3X6S7.1 C3X6S7_OXAFO 30S ribosomal protein S9
          Length = 130

 Score =  246 bits (629), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 122/130 (93%), Positives = 124/130 (95%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIGNYNYGTGRRKSAVARVF+K+GSGKI VNGKPANEYFSRETGLMVIRQPLELT NVER
Sbjct: 1   MIGNYNYGTGRRKSAVARVFLKAGSGKITVNGKPANEYFSRETGLMVIRQPLELTDNVER 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDIMVNV GGGESGQAGAVRHGITRALIDYD  LKP LSKAGFVTRDAREVERKKVGLRK
Sbjct: 61  FDIMVNVSGGGESGQAGAVRHGITRALIDYDIGLKPALSKAGFVTRDAREVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>F1W177.1 F1W177_9BURK SSU ribosomal protein S9p (S16e)
          Length = 130

 Score =  246 bits (629), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 121/130 (93%), Positives = 127/130 (97%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIG YNYGTGRRKSAVARVFIK+GSG+IVVNGKPANEYFSRETGLMVIRQPLELT+NV  
Sbjct: 1   MIGIYNYGTGRRKSAVARVFIKTGSGQIVVNGKPANEYFSRETGLMVIRQPLELTNNVTT 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDIM+NV+GGGESGQAGAVRHGITRALIDYDATLKPEL+KAGFVTRDAREVERKKVGLRK
Sbjct: 61  FDIMINVNGGGESGQAGAVRHGITRALIDYDATLKPELAKAGFVTRDAREVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130


>C3XD03.1 C3XD03_OXAFO 30S ribosomal protein S9
          Length = 130

 Score =  243 bits (619), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/130 (90%), Positives = 124/130 (95%)

Query: 1   MIGNYNYGTGRRKSAVARVFIKSGSGKIVVNGKPANEYFSRETGLMVIRQPLELTSNVER 60
           MIGNYNYGTGRRKSAVARVFIK+GSGKI VNGKPANEYFSRETGLMVIRQPLELT N+ER
Sbjct: 1   MIGNYNYGTGRRKSAVARVFIKAGSGKITVNGKPANEYFSRETGLMVIRQPLELTENLER 60

Query: 61  FDIMVNVHGGGESGQAGAVRHGITRALIDYDATLKPELSKAGFVTRDAREVERKKVGLRK 120
           FDI+VNV GGGESGQAGAVRHGI+RAL+DYDA LK  LSKAGF+TRDAREVERKKVGLRK
Sbjct: 61  FDILVNVKGGGESGQAGAVRHGISRALVDYDAALKSALSKAGFITRDAREVERKKVGLRK 120

Query: 121 ARRAKQFSKR 130
           ARRAKQFSKR
Sbjct: 121 ARRAKQFSKR 130