BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0013.p         (127 letters)

Database: pfamseq 
           15,929,002 sequences; 5,169,768,107 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C5AN33.1 C5AN33_BURGB Methyl-accepting chemotaxis sensory transd...   118   3e-25
B7WTV3.1 B7WTV3_COMTE Methyl-accepting chemotaxis sensory transd...   118   4e-25
F0BWW9.1 F0BWW9_9XANT Methyl-accepting chemotaxis protein             117   5e-25
B0RSS4.1 B0RSS4_XANCB Membrane-anchored chemotaxis sensory trans...   116   1e-24
Q8P9J4.1 Q8P9J4_XANCP Chemotaxis protein                              116   1e-24

>C5AN33.1 C5AN33_BURGB Methyl-accepting chemotaxis sensory transducer
          Length = 565

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 6/127 (4%)

Query: 1   MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60
           MD++V SV+RV+DI+GEI+ AS EQS+GIEQ+N A+  MDEVTQQNAALVEQA AAAQS+
Sbjct: 443 MDEIVRSVQRVTDIMGEIASASAEQSTGIEQINTAVAQMDEVTQQNAALVEQATAAAQSM 502

Query: 61  QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVA-PRIGAPAVRT 119
            DQ+ +L   V +FR++++    LA P     +V P+    A R+   A PR+ A   RT
Sbjct: 503 ADQAESLRATVSIFRVDARAQTELAAPVKQSVSVGPK---QAKRRYEPAQPRLAAA--RT 557

Query: 120 GDGDWET 126
           G G+W T
Sbjct: 558 GSGEWAT 564


>B7WTV3.1 B7WTV3_COMTE Methyl-accepting chemotaxis sensory transducer
          Length = 581

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 64/144 (44%), Positives = 94/144 (65%), Gaps = 17/144 (11%)

Query: 1   MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60
           M ++VASV+RVSD++GEI+ +S EQ  GI QVNQA++++D++TQQNAALVE+++AAA S+
Sbjct: 438 MSEIVASVRRVSDLIGEITASSTEQRDGINQVNQAVSNLDQMTQQNAALVEESSAAALSM 497

Query: 61  QDQSANLAQVVGVFRLNSQDA-PRLAKPAGPVATVAPRI---------GAPAVRKXTVAP 110
           Q+Q+  LA+VV +F+L  + +  ++A P  P +   P +           PA+RK    P
Sbjct: 498 QEQARRLAEVVSIFKLGHETSHAKVAAPQRPASRAMPAMAPVKQTAAAARPAIRKAPAGP 557

Query: 111 RIGA-------PAVRTGDGDWETF 127
              A       PA  +GDGDWETF
Sbjct: 558 APSALSASKAKPAADSGDGDWETF 581


>F0BWW9.1 F0BWW9_9XANT Methyl-accepting chemotaxis protein
          Length = 790

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 18/138 (13%)

Query: 1   MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60
           M D+VASV+RV+DI+GEI+ ASQEQSSGIEQVN  ITHMDE TQQNAALVE+A AAA+++
Sbjct: 660 MADIVASVQRVTDIMGEIAAASQEQSSGIEQVNLTITHMDEATQQNAALVEEATAAARTM 719

Query: 61  QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATV----------APRIGAPAVRKXTVAP 110
           +DQ++ LA  V  F L   DAP+ A+ A PVAT            P   AP+ RK    P
Sbjct: 720 EDQASQLAHAVSRFTL--ADAPQ-AQAAMPVATTPAVVAVARASKPSTRAPSARK----P 772

Query: 111 RIGAPAVRTG-DGDWETF 127
            + A A   G D  W+ F
Sbjct: 773 AVNASAATAGNDSQWQDF 790


>B0RSS4.1 B0RSS4_XANCB Membrane-anchored chemotaxis sensory transducer
          Length = 788

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 1/127 (0%)

Query: 1   MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60
           M ++VASV+RV+DI+GEIS ASQEQS+GIEQVNQ IT MDE TQQNAALVE+A AAA+S+
Sbjct: 663 MAEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTITQMDETTQQNAALVEEATAAARSM 722

Query: 61  QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVAPRIGAPAVRTG 120
           ++Q+ +LA+ V VF+L++  AP  A+PA     VA +  A  VR      R         
Sbjct: 723 EEQAGHLAEAVSVFKLDAPAAPVHARPAAS-RPVAVKTAAKPVRSAAAPARPAKSETALA 781

Query: 121 DGDWETF 127
           DG+W+ F
Sbjct: 782 DGNWQEF 788


>Q8P9J4.1 Q8P9J4_XANCP Chemotaxis protein
          Length = 790

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 1/127 (0%)

Query: 1   MDDVVASVKRVSDIVGEISFASQEQSSGIEQVNQAITHMDEVTQQNAALVEQAAAAAQSL 60
           M ++VASV+RV+DI+GEIS ASQEQS+GIEQVNQ IT MDE TQQNAALVE+A AAA+S+
Sbjct: 665 MAEIVASVQRVTDIMGEISAASQEQSAGIEQVNQTITQMDETTQQNAALVEEATAAARSM 724

Query: 61  QDQSANLAQVVGVFRLNSQDAPRLAKPAGPVATVAPRIGAPAVRKXTVAPRIGAPAVRTG 120
           ++Q+ +LA+ V VF+L++  AP  A+PA     VA +  A  VR      R         
Sbjct: 725 EEQAGHLAEAVSVFKLDAPAAPVHARPAAS-RPVAVKTAAKPVRSAAAPARPAKSETALA 783

Query: 121 DGDWETF 127
           DG+W+ F
Sbjct: 784 DGNWQEF 790