BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0085.p (393 letters) Database: pfamseq 15,929,002 sequences; 5,169,768,107 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D8ISI1.1 D8ISI1_HERSS Flagellar biosynthesis FlhB transmembrane ... 531 e-149 A6SZT0.1 A6SZT0_JANMA FlhB flagellar biosynthetic protein 456 e-126 F1VXQ7.1 F1VXQ7_9BURK Flagellar biosynthesis protein FlhB 453 e-125 A4G4P6.1 A4G4P6_HERAR Flagellar biosynthetic protein FlhB 452 e-125 D9SEW3.1 D9SEW3_GALCS Flagellar biosynthetic protein FlhB 418 e-115 >D8ISI1.1 D8ISI1_HERSS Flagellar biosynthesis FlhB transmembrane protein Length = 391 Score = 531 bits (1367), Expect = e-149, Method: Compositional matrix adjust. Identities = 263/374 (70%), Positives = 314/374 (83%) Query: 1 VAEDSDQERTEQPTSKRIEKAREQGDVPRSREMATCVMLLIGGSTLWMFTGPLVTSLNRL 60 +AEDSD ERTE T KRIE+AREQGDVPRSRE+ATC++LL+GGS +WMF+GP+VTSL+R+ Sbjct: 1 MAEDSDMERTEPATGKRIERAREQGDVPRSRELATCLVLLVGGSCVWMFSGPVVTSLDRI 60 Query: 61 MVSTMTFEREMAFDPALLFERMSGHFMEVAIACIPIAFLMTLAAVASPLILGGWLFNGSS 120 MV+ M+ ER +DP +L +S ++VAIA IP+AFLMTLAA+A+PL LGGWLFN SS Sbjct: 61 MVAMMSLERAAIYDPVVLMNLISARCLDVAIAVIPLAFLMTLAAMAAPLTLGGWLFNVSS 120 Query: 121 LEPKFDRLNPIKGIMNLFSLNSLVELGKGILKSVLVGVIAWYAMRSHLDAVLNLSVEPLK 180 L PKF +LNPI G N+FS+NSLVELGK +LK++LVG +AW +RS LDAV+ L VE LK Sbjct: 121 LAPKFSKLNPISGFANMFSVNSLVELGKAVLKTLLVGTVAWVTIRSQLDAVMGLGVESLK 180 Query: 181 VASSHMPNLLWTCFIMMVCALIGIAVIDVPYQLWNYTRKLKMSRQEVKQEHKESDGDPLI 240 A +H LLW FI MV ALI IAV+DVPYQLWNY RKL+M+R+EVKQEHKES+GDP I Sbjct: 181 TAGAHAAQLLWISFITMVSALIFIAVLDVPYQLWNYGRKLRMTREEVKQEHKESEGDPHI 240 Query: 241 KGKIRALQRAAARRRMMSAVPTADVVVTNPTHFAVALKYSEGGMSAPQVVAKGTEAVAAN 300 KGKIRA+QRA ARRRMM+ VPTADVVVTNPTH+AVALKYSEG M AP+VVAKG++ +AA Sbjct: 241 KGKIRAMQRAMARRRMMAEVPTADVVVTNPTHYAVALKYSEGKMGAPKVVAKGSDEIAAK 300 Query: 301 IRKIAAENNVPILEAPPLARALHYHTEIGDEIPESLYTAVAEVLAYIFQLRTYNSNGGVR 360 IR++A E+ VP+LEAPPLARALH HTEIGDEIPE+LYTAVAEVLAY+FQLRTY GG R Sbjct: 301 IRELAREHRVPLLEAPPLARALHTHTEIGDEIPEALYTAVAEVLAYVFQLRTYGQFGGTR 360 Query: 361 PEQPSDLEVPKELD 374 P +P+ LEVPKELD Sbjct: 361 PVEPTGLEVPKELD 374 >A6SZT0.1 A6SZT0_JANMA FlhB flagellar biosynthetic protein Length = 402 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 213/374 (56%), Positives = 281/374 (75%) Query: 1 VAEDSDQERTEQPTSKRIEKAREQGDVPRSREMATCVMLLIGGSTLWMFTGPLVTSLNRL 60 +AE+SD E+TE + +++E+AREQGDVPRSRE+ATC +LL G+ W+ G +V LN++ Sbjct: 13 LAEESDLEKTEPASPRKLEQAREQGDVPRSRELATCTLLLGAGAAFWILGGRMVGELNKM 72 Query: 61 MVSTMTFEREMAFDPALLFERMSGHFMEVAIACIPIAFLMTLAAVASPLILGGWLFNGSS 120 + + ++F+REMAFD LL + +++ IA P A ++ + A+ SP ++GGWLF+G + Sbjct: 73 LAAGLSFDREMAFDMELLLAHAAASIIDLLIAFAPAALILIVVALISPALIGGWLFSGKA 132 Query: 121 LEPKFDRLNPIKGIMNLFSLNSLVELGKGILKSVLVGVIAWYAMRSHLDAVLNLSVEPLK 180 L+P F R+NPIKG+ N+ S + VELGK I K++L+G IAW MR DAV+ LSVEPLK Sbjct: 133 LQPNFGRMNPIKGLGNMVSSRAAVELGKAIAKTILIGWIAWMVMRHEFDAVMALSVEPLK 192 Query: 181 VASSHMPNLLWTCFIMMVCALIGIAVIDVPYQLWNYTRKLKMSRQEVKQEHKESDGDPLI 240 + H+ +LL FI + L+ +A ID PYQ+W + +KL MSRQ+V+QE KES+G+P I Sbjct: 193 SGTEHLGHLLVFSFIFIAAGLVIVAAIDAPYQMWQHAKKLMMSRQDVRQESKESEGNPEI 252 Query: 241 KGKIRALQRAAARRRMMSAVPTADVVVTNPTHFAVALKYSEGGMSAPQVVAKGTEAVAAN 300 K KIR QR ARRRMM+ VPTADVVVTNPTH+AVALKYSE GM AP+VVAKG + VAA Sbjct: 253 KAKIRQQQREMARRRMMAEVPTADVVVTNPTHYAVALKYSENGMRAPRVVAKGADEVAAK 312 Query: 301 IRKIAAENNVPILEAPPLARALHYHTEIGDEIPESLYTAVAEVLAYIFQLRTYNSNGGVR 360 IR++A ENNV +LEAPPLARAL H E+GDEIPE+LY AVAEVLAY+FQLR Y+ +GG R Sbjct: 313 IRELAMENNVVLLEAPPLARALFRHAELGDEIPEALYIAVAEVLAYVFQLRAYSKHGGAR 372 Query: 361 PEQPSDLEVPKELD 374 P +P DLEVP E+D Sbjct: 373 PVKPGDLEVPPEMD 386 >F1VXQ7.1 F1VXQ7_9BURK Flagellar biosynthesis protein FlhB Length = 379 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 211/374 (56%), Positives = 283/374 (75%) Query: 1 VAEDSDQERTEQPTSKRIEKAREQGDVPRSREMATCVMLLIGGSTLWMFTGPLVTSLNRL 60 ++++SD E+TE + +RI+KARE GDVPRSRE+ATC++LL G L++ ++ L Sbjct: 1 MSDESDMEKTEPASQQRIDKARENGDVPRSRELATCLVLLAAGGGLYISGANMLRQLKAA 60 Query: 61 MVSTMTFEREMAFDPALLFERMSGHFMEVAIACIPIAFLMTLAAVASPLILGGWLFNGSS 120 + S +TF+R AFD +LL R+ H ++ +A P+A ++ L A+ASPL++GGWLF+ + Sbjct: 61 LASGLTFDRGQAFDFSLLLSRLGSHLGDLLLAFAPLAGILILVALASPLLIGGWLFSAQA 120 Query: 121 LEPKFDRLNPIKGIMNLFSLNSLVELGKGILKSVLVGVIAWYAMRSHLDAVLNLSVEPLK 180 L P F R+N G++ + SLN+LVELGK + K+V+VG IA+ MRS +D VL L VEP + Sbjct: 121 LAPNFGRMNLFSGLLKIVSLNALVELGKAVAKAVIVGSIAYLVMRSEIDEVLGLMVEPAE 180 Query: 181 VASSHMPNLLWTCFIMMVCALIGIAVIDVPYQLWNYTRKLKMSRQEVKQEHKESDGDPLI 240 S HM LL++ ++++V L+ IA +D PYQ+W+Y +K+ M+RQEV+QE KES+G+P I Sbjct: 181 AGSMHMAKLLFSTYMLIVMGLVLIAAVDAPYQMWSYAKKMMMTRQEVRQEAKESEGNPEI 240 Query: 241 KGKIRALQRAAARRRMMSAVPTADVVVTNPTHFAVALKYSEGGMSAPQVVAKGTEAVAAN 300 K KIRA QR ARRRMMS VPTADVVVTNPTH+AVALKY++G M APQVVAKG +AVAA Sbjct: 241 KAKIRAQQREMARRRMMSEVPTADVVVTNPTHYAVALKYTDGKMGAPQVVAKGADAVAAR 300 Query: 301 IRKIAAENNVPILEAPPLARALHYHTEIGDEIPESLYTAVAEVLAYIFQLRTYNSNGGVR 360 IR++AA NNVP+LEAPPLARAL H E+GD IPE+LYTAVAEVLAY+FQL+ Y S GG R Sbjct: 301 IRELAAANNVPLLEAPPLARALFKHVELGDAIPETLYTAVAEVLAYVFQLKAYKSQGGDR 360 Query: 361 PEQPSDLEVPKELD 374 PE+P D++VP LD Sbjct: 361 PEKPQDIDVPAGLD 374 >A4G4P6.1 A4G4P6_HERAR Flagellar biosynthetic protein FlhB Length = 390 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 214/374 (57%), Positives = 276/374 (73%) Query: 1 VAEDSDQERTEQPTSKRIEKAREQGDVPRSREMATCVMLLIGGSTLWMFTGPLVTSLNRL 60 +AE+SD E+TE + +++E+AREQGDVPRSRE+ATC +LL + W G ++ LN + Sbjct: 1 MAEESDLEKTEPASPRKLEQAREQGDVPRSRELATCTLLLGASAAFWFTGGNMIAELNSM 60 Query: 61 MVSTMTFEREMAFDPALLFERMSGHFMEVAIACIPIAFLMTLAAVASPLILGGWLFNGSS 120 + S ++F+REMAFD LL + +++ IA P A ++ + A+ASP+++GGWLF+ + Sbjct: 61 LASGLSFDREMAFDMELLLAHAAASIIKLLIAFAPAALILIVVALASPMLIGGWLFSAQA 120 Query: 121 LEPKFDRLNPIKGIMNLFSLNSLVELGKGILKSVLVGVIAWYAMRSHLDAVLNLSVEPLK 180 L+P F R+NPIKG+ N+ S S VELGK I K++L+G IAW M+ +D VL LSV PL+ Sbjct: 121 LQPNFGRMNPIKGLGNMVSTRSAVELGKAIAKTILIGCIAWTVMKYEIDGVLALSVTPLQ 180 Query: 181 VASSHMPNLLWTCFIMMVCALIGIAVIDVPYQLWNYTRKLKMSRQEVKQEHKESDGDPLI 240 + ++L F +V LI IA ID PYQ+W + +KL MSRQ+V+QE KESDG+P I Sbjct: 181 SGIEQVGHILLISFTFIVSGLIIIAGIDAPYQMWQHAKKLMMSRQDVRQESKESDGNPEI 240 Query: 241 KGKIRALQRAAARRRMMSAVPTADVVVTNPTHFAVALKYSEGGMSAPQVVAKGTEAVAAN 300 K KIR QR ARRRMM+ VPTADVVVTNPTH+AVALKYSE GM AP VVAKG + VAA Sbjct: 241 KAKIRQQQREMARRRMMTEVPTADVVVTNPTHYAVALKYSENGMRAPTVVAKGADEVAAK 300 Query: 301 IRKIAAENNVPILEAPPLARALHYHTEIGDEIPESLYTAVAEVLAYIFQLRTYNSNGGVR 360 IR+IA ENNV +LEAPPLARAL H E+GDEIPE+LY AVAEVLAY+FQLR Y+ NGG R Sbjct: 301 IREIALENNVVMLEAPPLARALFRHAELGDEIPEALYIAVAEVLAYVFQLRAYSKNGGTR 360 Query: 361 PEQPSDLEVPKELD 374 P++P DLEVP ELD Sbjct: 361 PQKPGDLEVPPELD 374 >D9SEW3.1 D9SEW3_GALCS Flagellar biosynthetic protein FlhB Length = 379 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 198/374 (52%), Positives = 274/374 (73%) Query: 1 VAEDSDQERTEQPTSKRIEKAREQGDVPRSREMATCVMLLIGGSTLWMFTGPLVTSLNRL 60 +AEDSD E+TEQP+ +R+++A+E+G V RS E++T +LL GG+TLW L + RL Sbjct: 1 MAEDSDLEKTEQPSQRRLDQAKEKGQVARSTELSTFSILLAGGATLWFMGASLNAHMVRL 60 Query: 61 MVSTMTFEREMAFDPALLFERMSGHFMEVAIACIPIAFLMTLAAVASPLILGGWLFNGSS 120 + + F +++ F P L+ R+ M++ I P+ +M + A+ +PLIL GWLF+ + Sbjct: 61 LHDALIFNQDVVFKPELMIPRLYDLSMDMLITFAPVLLMMLITALGAPLILNGWLFSTEA 120 Query: 121 LEPKFDRLNPIKGIMNLFSLNSLVELGKGILKSVLVGVIAWYAMRSHLDAVLNLSVEPLK 180 L P+F R+NPI GI + S NSLVEL K + K+ +VG +A + + H D V+ L+ + Sbjct: 121 LVPQFSRMNPITGIGRIISTNSLVELVKALGKATIVGGVATWVIWHHRDDVIQLASLSVT 180 Query: 181 VASSHMPNLLWTCFIMMVCALIGIAVIDVPYQLWNYTRKLKMSRQEVKQEHKESDGDPLI 240 A S L+ F+ +V ++ I IDVP+QLW++ +KL M+++E++QE KE+DG+P + Sbjct: 181 TAISQTGYLVCGSFLAIVSGMLLIVAIDVPFQLWSHNKKLMMTKEEIRQESKETDGNPEV 240 Query: 241 KGKIRALQRAAARRRMMSAVPTADVVVTNPTHFAVALKYSEGGMSAPQVVAKGTEAVAAN 300 KG+IR++QR AARRRMMSA+PTADVVVTNPTH++VALKYS+ GMSAP VVAKG+ +A Sbjct: 241 KGRIRSMQREAARRRMMSAIPTADVVVTNPTHYSVALKYSDKGMSAPVVVAKGSHLIAHR 300 Query: 301 IRKIAAENNVPILEAPPLARALHYHTEIGDEIPESLYTAVAEVLAYIFQLRTYNSNGGVR 360 IR+IA ENNVPILEAPPLARALH HTEIGD IPE+LYTAVAEVLAY++QL+ YN++GGVR Sbjct: 301 IREIAQENNVPILEAPPLARALHKHTEIGDAIPEALYTAVAEVLAYVYQLKRYNTDGGVR 360 Query: 361 PEQPSDLEVPKELD 374 P+QP L VP ELD Sbjct: 361 PDQPGSLPVPVELD 374